BAC Information

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BAC

Clone NameB6Ng01-248K05
Chromosome15 (Build37)
Map Location 53,921,828 - 53,922,950
singlet/doubletsinglet
Overlap genenone
Upstream geneExt1, Samd12, EG665097, EG621631
Downstream geneTnfrsf11b, LOC665280, EG383032, Colec10, Mal2, Nov, LOC665302, LOC100039816, Enpp2, LOC100039911, LOC100039822, Taf2, 2600005O03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248K05.bB6Ng01-248K05.g
ACCGA056662GA056663
length1,1271,164
definitionB6Ng01-248K05.b B6Ng01-248K05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgttgagctctattcccctttttagtcaggttatttgattct
ctggagtctaacctcttgagttctttgtatatattggatcttagccctct
attggatgtaggattggtgaagatcttttccaagtctgttggttgccttt
ttgttctattgacagaagcctgatatggctgtctcctgagaagctctgtc
agagcctgacaaagacagaggctgtagctcacagcaaaccattgaactga
gctcaggggtctccattgactaaaggagttgagggagcttgcagtcccat
ggagggagcaacagtgtcaacaggccaggctccctggagctaatttgcaa
agaataaataagtactaacaaataaataaaactttgaacttggttagaat
ttttctataccctctgtaattaaaggctatcaaatctacaaacctttcat
tataatctttaagggctttctagatttcttcttctcccccatcatctcct
catctattgacagaagctatttcctacagatgcaatgtttatttcctaag
taattagttttgaagtctgcttcctcctttctctccatattacaactact
ccaatctatacctttcagtgactcatttggatttctggcaagaactaagg
ggtcttatccataactctgcttacaagacagactttcttaaattgaaact
ctatattgtcacctttgcataccttctttgagaattcccacaaaatcctc
acctagggcctctatctacagcactccaacaagtccaaaaaatgctatag
actcactcctaaggttaaatactatttcttgcctcgggacctttttagag
atacttgatgcccttgcctgccatctgcatttaactgtggacttccatta
agtataggaaccatatccagtctatcagtgaagccacaccaaaccaagag
tgctggccaccttgggagagggaaacagaaactgtgacttttaatcactt
tcaacaattccaacgaaagagctgatggttgaaccgccaaatagtaacct
ttgatatgcagaacatacttgatggtcacaaaaataacattggtgtctcc
attcggtccagaagagaagctaggatg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccatttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtataaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccgaggatcccgcaatacctctcctgggca
tatatccagaagatgtcccaaccggtaagaagaacacatgctccactatt
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtacatttacacaatggaat
actactcagctattacaaaaatgaatttatgaaattcctaggcaaatgga
tggacctggagggtatcatcctgagtgaagtaagccaatcacaaaggaac
tcacacaatatgtactcactgataagtggatattagcccagaaacttagg
atacccaagatataagatacaacttgtcaaacgcaggaaattcaagaaga
acgaagaccaaagtgtggacattctaccctttcttagaaatgggaacaaa
acacccatagaaggagttacagagacaaaatttggagctgtgacgaaagg
atggaccatctagtgattgccatatgcagggatccatcccataatcagct
ttcaaatgctgacaccattgcatatactagcaagattttgctgaaaggac
ccagatatagccctctcttgtgagactatgcccggggcctagcaaacaca
gaagtggatgatcacagtcagctattggatgggtcacacggccctttatg
gaggagctagagaaattacccaaggagctaagggaactgcacctacatgt
ggaacaacaattatgaactaaccagtactgggaggcctctttgtctttag
ctgcatatgttatccaaaggattggctagtccggtcatctgccaaagaga
ggcccattggtactgctactttatggtccaagttacaggacacgaggctc
aaaacggggcagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_53921828_53922950
seq2: B6Ng01-248K05.b_45_1171 (reverse)

seq1  CATCCTAAGCTTCTCTTCTGGGCCCAAATGGAGACACC-ATG-TATTTTT  48
      |||||| |||||||||||| || || |||||||||||| ||| |||||||
seq2  CATCCT-AGCTTCTCTTCT-GGACCGAATGGAGACACCAATGTTATTTTT  48

seq1  GTGACAATCAGGTATG-TCTGCATAATCAAAGGTTTACTATTTG--CGTT  95
      ||||| |||| ||||| ||||||| |||||||| ||||||||||   |||
seq2  GTGACCATCAAGTATGTTCTGCAT-ATCAAAGG-TTACTATTTGGCGGTT  96

seq1  CAACCATCAGCTCTTTCGTTTGGAATTGTTG-AAGTGATTTAAAAGTCAC  144
      |||||||||||||||||| |||||||||||| |||||| |||||||||| 
seq2  CAACCATCAGCTCTTTCG-TTGGAATTGTTGAAAGTGA-TTAAAAGTCA-  143

seq1  CAGTTTCTGTTTCCTTCTCCC-AGGT-GCCAGCACTCTT-GTTTGGTGTG  191
      |||||||||||||| |||||| |||| |||||||||||| ||||||||||
seq2  CAGTTTCTGTTTCCCTCTCCCAAGGTGGCCAGCACTCTTGGTTTGGTGTG  193

seq1  GCTTCACTGATAGACTGGATATGGTTCCTATACTTAATGG-AGTCCACAG  240
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCTTCACTGATAGACTGGATATGGTTCCTATACTTAATGGAAGTCCACAG  243

seq1  TTAAATGCAGATGGCAGGCAAGGGCATCAAGTATCTCT-AAAAGGTCCCG  289
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTAAATGCAGATGGCAGGCAAGGGCATCAAGTATCTCTAAAAAGGTCCCG  293

seq1  AGGCAAGAAATAGTATTTAACCTTAGGAGTGAGTCTATAGCATTTTTTGG  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGAAATAGTATTTAACCTTAGGAGTGAGTCTATAGCATTTTTTGG  343

seq1  ACTTGTTGGAGTGCTGTAGATAGAGGCCCTAGGTGAGGATTTTGTGGGAA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTGGAGTGCTGTAGATAGAGGCCCTAGGTGAGGATTTTGTGGGAA  393

seq1  TTCTCAAAGAAGGTATGCAAAGGTGACAATATAGAGTTTCAATTTAAGAA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAAGAAGGTATGCAAAGGTGACAATATAGAGTTTCAATTTAAGAA  443

seq1  AGTCTGTCTTGTAAGCAGAGTTATGGATAAGACCCCTTAGTTCTTGCCAG  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTCTTGTAAGCAGAGTTATGGATAAGACCCCTTAGTTCTTGCCAG  493

seq1  AAATCCAAATGAGTCACTGAAAGGTATAGATTGGAGTAGTTGTAATATGG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCAAATGAGTCACTGAAAGGTATAGATTGGAGTAGTTGTAATATGG  543

seq1  AGAGAAAGGAGGAAGCAGACTTCAAAACTAATTACTTAGGAAATAAACAT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGGAGGAAGCAGACTTCAAAACTAATTACTTAGGAAATAAACAT  593

seq1  TGCATCTGTAGGAAATAGCTTCTGTCAATAGATGAGGAGATGATGGGGGA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTGTAGGAAATAGCTTCTGTCAATAGATGAGGAGATGATGGGGGA  643

seq1  GAAGAAGAAATCTAGAAAGCCCTTAAAGATTATAATGAAAGGTTTGTAGA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAAATCTAGAAAGCCCTTAAAGATTATAATGAAAGGTTTGTAGA  693

seq1  TTTGATAGCCTTTAATTACAGAGGGTATAGAAAAATTCTAACCAAGTTCA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATAGCCTTTAATTACAGAGGGTATAGAAAAATTCTAACCAAGTTCA  743

seq1  AAGTTTTATTTATTTGTTAGTACTTATTTATTCTTTGCAAATTAGCTCCA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTATTTATTTGTTAGTACTTATTTATTCTTTGCAAATTAGCTCCA  793

seq1  GGGAGCCTGGCCTGTTGACACTGTTGCTCCCTCCATGGGACTGCAAGCTC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCCTGGCCTGTTGACACTGTTGCTCCCTCCATGGGACTGCAAGCTC  843

seq1  CCTCAACTCCTTTAGTCAATGGAGACCCCTGAGCTCAGTTCAATGGTTTG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAACTCCTTTAGTCAATGGAGACCCCTGAGCTCAGTTCAATGGTTTG  893

seq1  CTGTGAGCTACAGCCTCTGTCTTTGTCAGGCTCTGACAGAGCTTCTCAGG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGCTACAGCCTCTGTCTTTGTCAGGCTCTGACAGAGCTTCTCAGG  943

seq1  AGACAGCCATATCAGGCTTCTGTCAATAGAACAAAAAGGCAACCAACAGA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCCATATCAGGCTTCTGTCAATAGAACAAAAAGGCAACCAACAGA  993

seq1  CTTGGAAAAGATCTTCACCAATCCTACATCCAATAGAGGGCTAAGATCCA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAAAGATCTTCACCAATCCTACATCCAATAGAGGGCTAAGATCCA  1043

seq1  ATATATACAAAGAACTCAAGAGGTTAGACTCCAGAGAATCAAATAACCTG  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATACAAAGAACTCAAGAGGTTAGACTCCAGAGAATCAAATAACCTG  1093

seq1  ACTAAAAAGGGGAATAGAGCTCAACAGAGAATTC  1123
      ||||||||||||||||||||||||||||||||||
seq2  ACTAAAAAGGGGAATAGAGCTCAACAGAGAATTC  1127