BAC Information

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BAC

Clone NameB6Ng01-248L10
Chromosome15 (Build37)
Map Location 5,219,946 - 5,220,481
singlet/doubletsinglet
Overlap genenone
Upstream genePlcxd3, C6, LOC100039214, 4930455B06Rik, C7, Card6, Rpl37, LOC100039281, Prkaa1, Ttc33, Ptger4
Downstream geneLOC100039322, LOC100039308, LOC666291, LOC666319, LOC100039358, LOC666323
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248L10.bB6Ng01-248L10.g
ACCGA056720GA056721
length1,1781,118
definitionB6Ng01-248L10.b B6Ng01-248L10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactaatactgagtggctgagaagcacctgaaaaaatgttca
acattcttaatcatcagggaaatgcaaatcaaaacaaccctgagattcca
cctcacaccagtcagaatggctaagatcaaaagttcaggtgacagcagat
gctggcgtggatgtggagaaaaagggacactcctccattgttggtgggat
tgcaagctggtacaaccactctggaaatcagactggtggttcctcagaaa
attggacatagtattactggaagattcatcaataccactcttgggcatat
acccagaagatgctccaacttgtaataaggacacatgctctactatgttc
gtagcagccttatttataatagccagaagctggaaagaacccagatgccc
ctcaacagaggaatggatacagaaactgtggtacatttacacaatggagt
gctactcagctattaaaaacaatgaatttatgaaattcttaggcagatgg
atgaatctgcaggatatcattctgagtgaggtaacccaattacaaaagaa
cacacacgatatgcatttactggtaagtggatattagcccagaaacatac
aatacccaagatacaatttacaaaacacataaaactcaagaagaaggaaa
accaaagtgcgaatacctctttccctcttagaatggggaacaaaatcccc
atggaaggagttacagagacaaagtttggagctgagatggaaggaaggac
catccagagactgccccacccgggtatccatcccataaacaaccaccaaa
cccagacactattgcacacaccagcaagattttgctgacatgaccctgat
atagttattttttgtgaggctatgcttaatgcatggaaaatagatatgtg
gatgctcatagtcatctattggatgcaacacagggccccaatggaggagc
tagagaaagtatccacggagctaaaggggtctgcaaccctaataggagac
aacattatgaagtattcagtgccccagaggcttgtctctagttgcattgt
gtttgcaagaatgcctagttcagtcaatcatggagggaggccttagcttg
gcaagattaatggccctgtaaggaatgcatgcaggaatggattgcttgac
tcggacaacgtaatgcgactatagatac
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaaatttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatagtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgaagtttgatat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctagag
ctttagattgtgttggccagctgctagtatggtggctctcttccccgttt
tccttggaggcactcaatagctaatgaggttttccctctttagaaatgct
ttcattgtggtcccaaggttttgggttacgtattgtgccttcattccatt
aaacttcctgaaaaaggtctttaatttctgttccttattcttccttgacc
aaggtatccattggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_5219946_5220481
seq2: B6Ng01-248L10.g_634_1184 (reverse)

seq1  CTTCTCAAT-GATACCTTGGTCAAGGAAGGAATAAAGAA-AGAAATTAAA  48
      |||| |||| |||||||||||||||||| |||||| ||| ||||||||||
seq2  CTTC-CAATGGATACCTTGGTCAAGGAA-GAATAAGGAACAGAAATTAAA  48

seq1  GAC--TTTTTAG--AGTTTAATGAAAATGAAGCCACA--ACGT-ACCCAA  91
      |||  |||| ||  |||||||||  ||||||| ||||  |||| ||||||
seq2  GACCTTTTTCAGGAAGTTTAATG-GAATGAAGGCACAATACGTAACCCAA  97

seq1  ACCTTTGGGA-CACAATGAAAGCATTTCT-AAGAGGGAAA--CTCA-TAG  136
      | | |||||| |||||||||||||||||| ||||||||||  |||| |||
seq2  AACCTTGGGACCACAATGAAAGCATTTCTAAAGAGGGAAAACCTCATTAG  147

seq1  CTA-TGAGTGCCTTCAAGAAAAAACGGG-AGAGAGC--ACATACTAGCAG  182
      ||| ||||||||| |||| ||||  ||| |||||||   |||||||||||
seq2  CTATTGAGTGCCTCCAAGGAAAACGGGGAAGAGAGCCACCATACTAGCAG  197

seq1  CTTGACAACAC-ATCTAAAAGCTCTAGAAAAAAAGGAAGCAAATTCACCC  231
      || | |||||| |||| |||||||||||||||||||||||||||||||||
seq2  CTGGCCAACACAATCT-AAAGCTCTAGAAAAAAAGGAAGCAAATTCACCC  246

seq1  AAGAGGAGTAGACGGCAGGAAATAATCAAAC-TCAGGGGTGAAATCAACC  280
      ||||||||||||||||||||||| ||||||| ||||||||||||||||||
seq2  AAGAGGAGTAGACGGCAGGAAAT-ATCAAACTTCAGGGGTGAAATCAACC  295

seq1  AAGTGGAAACAAGAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGG  330
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGAAACAAGAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGG  345

seq1  TTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAA  380
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAA  395

seq1  AGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAAATGAAAAGGGAG  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAAATGAAAAGGGAG  445

seq1  ACATAACAACAGATCCTGAAGAAATCCAAAACACTATCAGATCCTTCTAC  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACAACAGATCCTGAAGAAATCCAAAACACTATCAGATCCTTCTAC  495

seq1  AAAAGGCTATACTCAACAAAACTGGAAAACCTGGATGAAATGGACAAATT  530
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATT  545

seq1  TCTGGA  536
      ||||||
seq2  TCTGGA  551