BAC Information

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BAC

Clone NameB6Ng01-249E13
Chromosome15 (Build37)
Map Location 32,922,433 - 32,923,340
singlet/doubletsinglet
Overlap geneSdc2
Upstream geneTas2r119, 0610007N19Rik, Sema5a, LOC100040962
Downstream genePgcp, 1700084J12Rik, Tspyl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249E13.bB6Ng01-249E13.g
ACCGA057145GA057146
length1,087909
definitionB6Ng01-249E13.b B6Ng01-249E13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttccagagaaattcaaggttgggtttatatgagtgtctggaca
caccatttttatatcatcttgttttatgagggttttttttaatgcaccac
atttaacactcattgactgcttaatgctgcacttgaagctagcagcagca
tcactcaagcatggaagaagcttctggaacacaaacagttctgtataagg
agcagagatatccaatagcactacacttagggtcatttcaaacagtgtag
tcacacagaagaagaaaaacagatgggagttggggggatggtactaagta
caccatgaaaagaaatgtttgtttatagcatgggagaaagaagagaagtt
tggcagcaagtatatgagaggtaaaataaggaagaaaataatattacttg
gtattaacttggttttgccattactactgtatggttataagggaatttac
ttaattactctctcagtttatccttttctaaaaatgaagatagtaatatt
actgtattgttttaattgaagattaaaataattacatgcataaaaaagtg
tttggttacgccccttctaagcacaacaaaagtaccattttggttagcta
agaaaaataaacagaggtgtgttaggagcaggtgtggcggcagtcctaaa
ggcgccagggactgcagctaagtcatatgacttgcacctgacttcctcat
ataagacacaaacatcttgagtgctgcgcaggtgtaccaggatacaggtg
aatccaatttggtggagatttgcccctgctgccctgattagctgaagcct
cgtgactggcaagggggcgtggcctgcggttcgtggatgagagagagtat
aaaaggagtgagaggcccagggttcatgggagatataaacaagagatata
aaaacaagggagatataaaaacaaggagatataaacaagggagagatata
aacaagggagatataatcacgtaaatatagagaaagagaaacagactgaa
taaacgtgtgcaagaagatccttgttatcagccgtcgttcctccttgcca
gttgagcgccacgcagaagtggtgtcttgaatcctcg

gaattcaagaaggtagactccagaaaaccaaataaccttattctcttttc
cattgcatgggtcctagagatccaactcaagtcctaacggcaggggtcac
ctttatgcactgaactgtatcactggcctttactgttgtatttttaatga
aataatagcaagcttctgtacatgaaagttgttgaaacaatagtcattaa
atgatctagttagataaatgggatagacagagcaattaaattgttagtca
ctgactcctgcaaatatacatttaagcagcttatccaagcaggaaaagct
taccaaagtaggtggcttttgaagacccagacttttaaccaaaatctcaa
atctcctagaaatgaattgttccatatcagtagcctccagacacctgtgg
ctactggaacataaatttattaagagtaaaaaaaaaaaaaaaaaaaaaaa
aaacagaggatttcaattgcttaggcagggctaatggctatcattttgaa
tagcacagatgtagaaatttccttcaatgaagaaattgtcactggctaac
cctaattcacaaaaaagcattccaattggagggtgggactggaattagtt
gaccaagctgattctggtttctctaatgcttttagcttttttgtgccatc
accactttacaatagaagagatgaagcctagagatgtgttttctagggga
gaaactttgcttaaaatgacttactggggataaaaaggctttctggacca
gtaaagctgtgaaatgcccccaggtgacaaccccaggaagcttggcttga
aatcagtctgggctcttaatcagctagtattaaagagtcttatagaattc
tcaacttttgctaatttagttgggtgaatttgagaggataggatagatgg
gggagaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_32922433_32923340
seq2: B6Ng01-249E13.g_67_975

seq1  GAATTCAAGAAGGTAGACTCCAGAAAACCAAATAACCTTATTCTCTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAAGGTAGACTCCAGAAAACCAAATAACCTTATTCTCTTTTC  50

seq1  CATTGCATGGGTCCTAGAGATCCAACTCAAGTCCTAACGGCAGGGGTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCATGGGTCCTAGAGATCCAACTCAAGTCCTAACGGCAGGGGTCAC  100

seq1  CTTTATGCACTGAACTGTATCACTGGCCTTTACTGTTGTATTTTTAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGCACTGAACTGTATCACTGGCCTTTACTGTTGTATTTTTAATGA  150

seq1  AATAATAGCAAGCTTCTGTACATGAAAGTTGTTGAAACAATAGTCATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAGCAAGCTTCTGTACATGAAAGTTGTTGAAACAATAGTCATTAA  200

seq1  ATGATCTAGTTAGATAAATGGGATAGACAGAGCAATTAAATTGTTAGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTAGTTAGATAAATGGGATAGACAGAGCAATTAAATTGTTAGTCA  250

seq1  CTGACTCCTGCAAATATACATTTAAGCAGCTTATCCAAGCAGGAAAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCCTGCAAATATACATTTAAGCAGCTTATCCAAGCAGGAAAAGCT  300

seq1  TACCAAAGTAGGTGGCTTTTGAAGACCCAGACTTTTAACCAAAATCTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAAGTAGGTGGCTTTTGAAGACCCAGACTTTTAACCAAAATCTCAA  350

seq1  ATCTCCTAGAAATGAATTGTTCCATATCAGTAGCCTCCAGACACCTGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTAGAAATGAATTGTTCCATATCAGTAGCCTCCAGACACCTGTGG  400

seq1  CTACTGGAACATAAATTTATTAAGAGTAAAAAAAAAAAAAAAAAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGGAACATAAATTTATTAAGAGTAAAAAAAAAAAAAAAAAAAAAAA  450

seq1  AAACAGAGGATTTCAATTGCTTAGGCAGGGCTAATGGCTATCATTTTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGGATTTCAATTGCTTAGGCAGGGCTAATGGCTATCATTTTGAA  500

seq1  TAGCACAGATGTAGAAATTTCCTTCAATGAAGAAATTGTCACTGGCTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACAGATGTAGAAATTTCCTTCAATGAAGAAATTGTCACTGGCTAAC  550

seq1  CCTAATTCACAAAAAAGCATTCCAATTGGAGGGTGGGACTGGAATTAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATTCACAAAAAAGCATTCCAATTGGAGGGTGGGACTGGAATTAGTT  600

seq1  GACCAAGCTGATTCTGGTTTCTCTAATGCTTTTAGCTTTTTTGTGCCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGCTGATTCTGGTTTCTCTAATGCTTTTAGCTTTTTTGTGCCATC  650

seq1  ACCACTTTACAATAGAAGAGATGAAGCCTAGAGATGTGTTTTCTAGGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTTTACAATAGAAGAGATGAAGCCTAGAGATGTGTTTTCTAGGGGA  700

seq1  GAAACTTTGCTTAAAATGACTTACTGGGGATAAAAAGGCTTTCTGGACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTTGCTTAAAATGACTTACTGGGGATAAAAAGGCTTTCTGGACCA  750

seq1  GTAAAGCTGTGAAATGCCCCCAGGTGACAACCCCAGGAAGCTTGGCTTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGCTGTGAAATGCCCCCAGGTGACAACCCCAGGAAGCTTGGCTTGA  800

seq1  AATCAGTCTGGGCTCTTAATCAGCTAGTATTAAAGAGTCTTATAGAATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTCTGGGCTCTTAATCAGCTAGTATTAAAGAGTCTTATAGAATTC  850

seq1  TCAACTTTTGCTAATTTAGTTGGGTGAATTTGAGAGGATAGGATAGAT-G  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCAACTTTTGCTAATTTAGTTGGGTGAATTTGAGAGGATAGGATAGATGG  900

seq1  TGGAGAGGG  908
       ||||||||
seq2  GGGAGAGGG  909


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