BAC Information

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BAC

Clone NameB6Ng01-249H24
Chromosome15 (Build37)
Map Location 11,698,835 - 11,699,184
singlet/doubletsinglet
Overlap genenone
Upstream geneC1qtnf3, Amacr, Slc45a2, Rxfp3, Adamts12, Tars, LOC100039772
Downstream geneNpr3, LOC381002, Sub1, LOC100040027, Zfr, LOC100040052, LOC100040066, Mtmr12, LOC100039846, Golph3, Pdzd2, LOC100040109
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249H24.bB6Ng01-249H24.g
ACCGA057304GA057305
length352693
definitionB6Ng01-249H24.b B6Ng01-249H24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
acttcctgtctctggaccatccatctccttaaaaaattctttataaagtt
tgcacccctgcatctagaacagtgttccaacaatcctgttagcttcatcc
ctgtaagcaaaagagcttctcagggtctactccttgcaatttgctaccat
tggcattgctaaaaatagtcttagcctcttctgtatttgccaggcactgg
catagcctcacacgagacagttatatcagggtcccttcagaaaaatcttg
ctggcattttcaatagtgtctgagtttggtggctgattatgggatggatc
ctcaggtggatgctcacagtcatctataggatggaacactgggcccccaa
tg
gaattcactttgtagaccaggctggtctcaaactcagaaatctgcctgcc
tctgcctcccgagtgctgggattaaaggcgtgtgccaccacacccagctc
ataggcatattttttaatctattttttgagaattttcacacatgagcatt
gtatttatatcctttccacccacccaactcccccatgtccacttccactc
ctcagatcattgaccttatgctctttaattattactctctctctctctct
ctctcacacctctctctctctctctctctctctctctctctttctctcac
attctctgttaggttatcattcactaaaatgggataaatgttttcttctt
tccaaaattcataagtagatgtggtaaacaccattgtaaatgtgtttttt
gagcaaaggaaagattatagggactttttgggttggtaaggaaaaaaaaa
gtaacaccaaggaatgtgagggaagtggcggtaaaaacaggcaccgcggg
gatctctcactccagccgcccttacctccttatatatttctattcccctt
ccacaccttctttagcatttcaccctcattctctctctctgtcatgccag
gcagtattttctcctactgacgccacaaaggagaacgcatttgtgcacaa
gaagacaccataaagatatactctcccggggtatcaaaagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_11698835_11699184
seq2: B6Ng01-249H24.b_54_405

seq1  ACTTCCTGTCTCTGGACCATCCATCTCCTT-TTTATTTCTTTATAAAGTT  49
      ||||||||||||||||||||||||||||||    | ||||||||||||||
seq2  ACTTCCTGTCTCTGGACCATCCATCTCCTTAAAAAATTCTTTATAAAGTT  50

seq1  TGCACCCCTGCATCTAGAACAGTGTTCC-TCAATCCTGTTAGCTTCATCC  98
      ||||||||||||||||||||||||||||  ||||||||||||||||||||
seq2  TGCACCCCTGCATCTAGAACAGTGTTCCAACAATCCTGTTAGCTTCATCC  100

seq1  CTGTAAGCAAAAGAGCTTCTCAGGGTCTACTCCTTGCAATTTGCTACCAT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGCAAAAGAGCTTCTCAGGGTCTACTCCTTGCAATTTGCTACCAT  150

seq1  TGGCATTGCTAAAAATAGTCTTAGCCTCTTCTGTATTTGCCAGGCACTGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTGCTAAAAATAGTCTTAGCCTCTTCTGTATTTGCCAGGCACTGG  200

seq1  CATAGCCTCACACGAGACAGTTATATCAGGGTCCCTTCAGAAAAATCTTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCCTCACACGAGACAGTTATATCAGGGTCCCTTCAGAAAAATCTTG  250

seq1  CTGGCATTTTCAATAGTGTCTGAGTTTGGTGGCTGATTATGGGATGGATC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATTTTCAATAGTGTCTGAGTTTGGTGGCTGATTATGGGATGGATC  300

seq1  CTCAGGTGGATGCTCACAGTCATCTATAGGATGGAACACAGGGCCCCCAA  348
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTCAGGTGGATGCTCACAGTCATCTATAGGATGGAACACTGGGCCCCCAA  350

seq1  TG  350
      ||
seq2  TG  352