BAC Information

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BAC

Clone NameB6Ng01-249M06
Chromosome15 (Build37)
Map Location 81,923,970 - 82,075,678
singlet/doubletdoublet
Overlap geneMei1, Ccdc134, Srebf2, LOC435145, Tnfrsf13c, Cenpm
Upstream geneMkl1, LOC675966, Mchr1, Slc25a17, St13, Xpnpep3, Dnajb7, Rbx1, EG383080, Ep300, L3mbtl2, Rangap1, Zc3h7b, Tef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik
Downstream gene1500009C09Rik, Sept3, Wbp2nl, Naga, C920005C14Rik, 1500032L24Rik, Ndufa6, Cyp2d22, LOC545123, Cyp2d10, Cyp2d9, EG545124, EG667196, EG667177, 9030605E09Rik, BC018285, Cyp2d13, LOC380998, LOC627860, LOC676200, 1300013D18Rik, LOC271300, Cyp2d26, Tcf20, Nfam1, Serhl, 1110014J01Rik, Poldip3, Cyb5r3, A4galt
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249M06.bB6Ng01-249M06.g
ACCGA057499GA057500
length7671,103
definitionB6Ng01-249M06.b B6Ng01-249M06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,923,970 - 81,924,739)(82,074,578 - 82,075,678)
sequence
gaattctatattactattacagttgttactgtagtgagagaatgtcaccc
tggattatggcttagaaagcacatttggacattataactcgtcttcgttc
ctagcggtaggtgttcctgtttttatttggggggagaggatagggcagag
gcaggggaggtaaagtgtctggctctacagctaacgacagaggcagtcct
taggtgcaggcttgtgagttcacattccctagctcttctcgtgtcaatca
gatgaaagcggtcacatctgcacttgtattccatggccacttctgaagat
gccttttcttcttcagagcctcaggcctttgtattctctcacttgtggta
ttttcagaggtactcggaggaggccacgcatccaaagctgatggaggttt
tcctctccattctacacagcctctttgtcatcattccccacatgaaggtg
aagttctccaggaagcttggtaggtggcatgtcattggtgtctgcaggga
ggtgagctctgtgagcagctgctgagagtgctgaggagatgtctgtcaga
ctgtatatcctcttctctgtcagtgttgagtgggaaggtgaccatggggc
agtcaaagctattaaagccagtttccaattcattgatactttcagtgttg
tctagaaatccaggaggctccagttaaatatttgcaatgcaacaatgcag
tcccttcctcctttcttccttccttccttccttcttccttccttacttcc
tcctttccttcctcctt

gaattctacagccgcctccactcacatgagtccgcgtgcgcgcacacaca
cacatttgcacgtaattaaaaataaatcttggggggctggcgagatggcg
cagaggttaagagcattgactgctcttctgaaggtcctgagttcaaatcc
cagcaaccacatggtggctcacaaccatccgtaatgagatctgataccca
cttctggtgtgtctgaagacagctacagtgtacttatatgtaataaataa
atctttaaaaaaataaatcttgggagtggggagtaggggcagagacagaa
caggctcttttaagagtggcggttcctgccaggcgtggtggcgcacgcct
ttaatcccagcaggacagccagagctatacagagaaatcatgtctcgaag
gaaaaacaaacaaacaaacaaacaaaaaagagtggcggttgcttttaaaa
gtggcggctcagaaagccccgcccggacatgcgtaccgcgccccgcccac
tagagaggcgggccttgcgacggtttgaaagcgccatgcgctgagccgag
tggcgctgctgccgctgagatgtcggtgctgaggtcgatggacaagctgc
ccgacctgaacagggctaccgtcttggtaggtgcgggcagcgcccctgga
ccggcttccccgcagccaaagccggtgcccttcctcagcctcagcgcgct
ccgacagcggggggcgggcggacgggcgcgttactctggaccaatcggag
cggcggctcgcgaggctgagggacgcctccaccaataggcgcgcggctga
tttttaccaccggctgagtgggcgttccagttcgaacgtggctttcccgc
gtttcgaggaggaggccgggccggtccccctccgtggatggctccttagg
gctcctcttctgaggaaatggcttccctccgagccgcctctagctgagtt
gttgtaccccccaggagggatttcgagtgcggggccctcataggaagctg
ctctgctcgatctcatctgtcttgttctcttccatcgcagctggtgacac
gagatgcgctttctgccacgactggcggagctgatgctcaaagatgactg
tgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_81923970_81924739
seq2: B6Ng01-249M06.b_45_811

seq1  GAATTCTATATTACTATTACAGTTGTTACTGTAGTGAGAGAATGTCACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATATTACTATTACAGTTGTTACTGTAGTGAGAGAATGTCACCC  50

seq1  TGGATTATGGCTTAGAAAGCACATTTGGACATTATAACTCGTCTTCGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTATGGCTTAGAAAGCACATTTGGACATTATAACTCGTCTTCGTTC  100

seq1  CTAGCGGTAGGTGTTCCTGTTTTTATTTGGGGGGAGAGGATAGGGCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCGGTAGGTGTTCCTGTTTTTATTTGGGGGGAGAGGATAGGGCAGAG  150

seq1  GCAGGGGAGGTAAAGTGTCTGGCTCTACAGCTAACGACAGAGGCAGTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGGAGGTAAAGTGTCTGGCTCTACAGCTAACGACAGAGGCAGTCCT  200

seq1  TAGGTGCAGGCTTGTGAGTTCACATTCCCTAGCTCTTCTCGTGTCAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGCAGGCTTGTGAGTTCACATTCCCTAGCTCTTCTCGTGTCAATCA  250

seq1  GATGAAAGCGGTCACATCTGCACTTGTATTCCATGGCCACTTCTGAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAAGCGGTCACATCTGCACTTGTATTCCATGGCCACTTCTGAAGAT  300

seq1  GCCTTTTCTTCTTCAGAGCCTCAGGCCTTTGTATTCTCTCACTTGTGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTCTTCTTCAGAGCCTCAGGCCTTTGTATTCTCTCACTTGTGGTA  350

seq1  TTTTCAGAGGTACTCGGAGGAGGCCACGCATCCAAAGCTGATGGAGGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGAGGTACTCGGAGGAGGCCACGCATCCAAAGCTGATGGAGGTTT  400

seq1  TCCTCTCCATTCTACACAGCCTCTTTGTCATCATTCCCCACATGAAGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCCATTCTACACAGCCTCTTTGTCATCATTCCCCACATGAAGGTG  450

seq1  AAGTTCTCCAGGAAGCTTGGTAGGTGGCATGTCATTGGTGTCTGCAGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTCCAGGAAGCTTGGTAGGTGGCATGTCATTGGTGTCTGCAGGGA  500

seq1  GGTGAGCTCTGTGAGCAGCTGCTGAGAGTGCTGAGGAGATGTCTGTCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGCTCTGTGAGCAGCTGCTGAGAGTGCTGAGGAGATGTCTGTCAGA  550

seq1  CTGTATATCCTCTTCTCTGTCAGTGTTGAGTGGGAAGGTGACCATGGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATATCCTCTTCTCTGTCAGTGTTGAGTGGGAAGGTGACCATGGGGC  600

seq1  AGTCAAAGCTATTAAAGCCAGTTTCCAATTCATTGATACTTTCAGTGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAGCTATTAAAGCCAGTTTCCAATTCATTGATACTTTCAGTGTTG  650

seq1  TCTAGAAATCCAGGAGGCTCCAGTTAAATATTTGCAATGCAACAATGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAATCCAGGAGGCTCCAGTTAAATATTTGCAATGCAACAATGCAG  700

seq1  TCCCTTCCTCCCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT  750
      ||||||||| |||||||||||||||||||||||| ||||||||||| |||
seq2  TCCCTTCCT-CCTTTCTTCCTTCCTTCCTTCCTT-CTTCCTTCCTTACTT  748

seq1  CCTTCCTTCCTTCCTTCCTT  770
      ||| | |||||||| |||||
seq2  CCTCCTTTCCTTCC-TCCTT  767


seq1: chr15_82074578_82075678
seq2: B6Ng01-249M06.g_65_1167 (reverse)

seq1  GCACAGTCATCTTTGAGCATCGACTCCGCCAGCTGCTGCAG-AAGCGCAT  49
      |||||||||||||||||||||  |||||||||  |  |||| ||||||||
seq2  GCACAGTCATCTTTGAGCATCAGCTCCGCCAGTCGTGGCAGAAAGCGCAT  50

seq1  CCTCGGTGCTCACCAGCTGCGAAGGGAGAGAACCAGGCAGATGGAGATCC  99
       ||| ||| ||||||||||||| || ||||||| || ||||| ||||| |
seq2  -CTC-GTG-TCACCAGCTGCGATGGAAGAGAACAAGACAGAT-GAGAT-C  95

seq1  GAGCAGGGCGGCTCCTTTGGAGGGCCCCGCACTCCGAATCCCTCCT-GGG  148
      |||||| || ||| | |  |||||||||||||||  |||||||||| |||
seq2  GAGCAGAGCAGCTTCCTATGAGGGCCCCGCACTCGAAATCCCTCCTGGGG  145

seq1  GGTACA--CACTCAGCTAGAGGCGGCTCGGAGGG-AGCCATTTCCTCAGA  195
      ||||||   ||||||||||||||||||||||||| |||||||||||||||
seq2  GGTACAACAACTCAGCTAGAGGCGGCTCGGAGGGAAGCCATTTCCTCAGA  195

seq1  AGAGGAGCCCTAAGGAGCCATCCACGGAGGGGGACC-GCCCGGCCTCCTC  244
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGAGGAGCCCTAAGGAGCCATCCACGGAGGGGGACCGGCCCGGCCTCCTC  245

seq1  CTCGAAACGCGGGAAAGCCACGTTCGAACTGGAACGCCCACTCAGCCGGT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAAACGCGGGAAAGCCACGTTCGAACTGGAACGCCCACTCAGCCGGT  295

seq1  GGT-AAAATCAGCCGCGCGCCTATTGGTGGAGGCGTCCCTCAGCCTCGCG  343
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAAATCAGCCGCGCGCCTATTGGTGGAGGCGTCCCTCAGCCTCGCG  345

seq1  AGCCGCCGCTCCGATTGGTCCAGAGTAACGCGCCCGTCCGCCCGCCCCCC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGCCGCTCCGATTGGTCCAGAGTAACGCGCCCGTCCGCCCGCCCCCC  395

seq1  GCTGTCGGAGCGCGCTGAGGCTGAGGAAGGGCACCGGCTTTGGCTGCGGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCGGAGCGCGCTGAGGCTGAGGAAGGGCACCGGCTTTGGCTGCGGG  445

seq1  GAAGCCGGTCCAGGGGCGCTGCCCGCACCTACCAAGACGGTAGCCCTGTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCGGTCCAGGGGCGCTGCCCGCACCTACCAAGACGGTAGCCCTGTT  495

seq1  CAGGTCGGGCAGCTTGTCCATCGACCTCAGCACCGACATCTCAGCGGCAG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCGGGCAGCTTGTCCATCGACCTCAGCACCGACATCTCAGCGGCAG  545

seq1  CAGCGCCACTCGGCTCAGCGCATGGCGCTTTCAAACCGTCGCAAGGCCCG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGCCACTCGGCTCAGCGCATGGCGCTTTCAAACCGTCGCAAGGCCCG  595

seq1  CCTCTCTAGTGGGCGGGGCGCGGTACGCATGTCCGGGCGGGGCTTTCTGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTAGTGGGCGGGGCGCGGTACGCATGTCCGGGCGGGGCTTTCTGA  645

seq1  GCCGCCACTTTTAAAAGCAACCGCCACTCTTTTTTGTTTGTTTGTTTGTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCCACTTTTAAAAGCAACCGCCACTCTTTTTTGTTTGTTTGTTTGTT  695

seq1  TGTTTTTCCTTCGAGACATGATTTCTCTGTATAGCTCTGGCTGTCCTGCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCCTTCGAGACATGATTTCTCTGTATAGCTCTGGCTGTCCTGCT  745

seq1  GGGATTAAAGGCGTGCGCCACCACGCCTGGCAGGAACCGCCACTCTTAAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTAAAGGCGTGCGCCACCACGCCTGGCAGGAACCGCCACTCTTAAA  795

seq1  AGAGCCTGTTCTGTCTCTGCCCCTACTCCCCACTCCCAAGATTTATTTTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTGTTCTGTCTCTGCCCCTACTCCCCACTCCCAAGATTTATTTTT  845

seq1  TTAAAGATTTATTTATTACATATAAGTACACTGTAGCTGTCTTCAGACAC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATTTATTTATTACATATAAGTACACTGTAGCTGTCTTCAGACAC  895

seq1  ACCAGAAGTGGGTATCAGATCTCATTACGGATGGTTGTGAGCCACCATGT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAGTGGGTATCAGATCTCATTACGGATGGTTGTGAGCCACCATGT  945

seq1  GGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGCAGTCAATGCTCTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGCAGTCAATGCTCTT  995

seq1  AACCTCTGCGCCATCTCGCCAGCCCCCCAAGATTTATTTTTAATTACGTG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTGCGCCATCTCGCCAGCCCCCCAAGATTTATTTTTAATTACGTG  1045

seq1  CAAATGTGTGTGTGTGCGCGCACGCGGACTCATGTGAGTGGAGGCGGCTG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTGTGTGTGTGCGCGCACGCGGACTCATGTGAGTGGAGGCGGCTG  1095

seq1  TAGAATTC  1101
      ||||||||
seq2  TAGAATTC  1103


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