BAC Information

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BAC

Clone NameB6Ng01-250H05
Chromosome15 (Build37)
Map Location 62,693,562 - 62,852,108
singlet/doubletdoublet
Overlap geneLOC100040430, Tsg101-ps
Upstream geneMyc, Pvt1, LOC100040584, H2afy3
Downstream geneEG239502, EG432959, LOC672194, Mlze, AI987692, Gsdmdc2, 9930109F21Rik, LOC665769, 9030605I04Rik, 4933426G20Rik, 0910001A06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250H05.bB6Ng01-250H05.g
ACCGA057993GA057994
length1,0711,057
definitionB6Ng01-250H05.b B6Ng01-250H05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,693,562 - 62,694,630)(62,851,040 - 62,852,108)
sequence
gaattcacaaatgtatccattctcttttcatactgtcactcatcaaacat
tcaatgatatttcagagacaagctaatgcagattatgtctataaagtgat
gttgatagtatagataataaatgcatgggtaacaaatattatagtatgct
attatataatatataatataatataatataatacacacacacacatatat
atatatatatatatatatatatatatatatatatatatatatattccatt
gggattttggttgttcaaggtttatcctcttcatggcacacatcataaga
atcaagaaaaacaaatactacaacccacacctgtgtctatatttgatata
cgatttgtctatctattaaggtattaagcaataagtgggggcttgttcta
atccttacaaacctcacaaacaggataataaaaccatacaaaatatatca
aagagaacacccctgacaaaaggaacttacataagtatatcagaagtaca
agtcaactctgctattctcagattttagtatttatttatttatcccactc
tggtaacccttctcagtatttcatgaattattctcatttttatttcaata
tcttcatgttcttttccttctcatatgttttaacttatgactttatttct
tgtttcactattccaaccatcattaatttcttttggcacaacacataggt
tctactgtgaagaacccagtccctatgacacatagttttctgtgccagct
tattccattctcaatagccagaacagtatggtgggctgaaaataacatca
tgttacatttttagatgaacgattgcattcacacattatgacatataaaa
tattgccaaaatcatgatatgagttataacaatattgatgaagctgtaag
gtgtaaataagtcaatacaccataaaaccttttaaaaattatgcccagaa
aatggtggttaagagctcatcaatgttaatacataaagtaaaacttgaat
cagatttatgcaagtttttttttctgttttgtttttttggtgtttattgt
tgtttgtttaaaataggaata
gaattcttctcaaactccaatctcctttaaattttggtacatggaagtct
gaccgcaactgttgcttacttagtcacctctcaaagacaatgggatttta
cttgaatgcaggttttcactcaggtatgcagggtgtaaatgaaactccat
ctctcgttgtctctgctggtataggtatttaatgaggactcagggcggaa
ataattctgtagtactagtctgtgcaggtatttttgggaaaagaaggctc
aggcagttagcatgggatgacaaagagttcaatacacccaccaaaacata
tttgctatagcctttctcaggcctggcagtcatgaatctgagattctcca
tctgttttggaacttgggttgaagctcttagcttaaaaaaatctatatga
ttaaaatgtaccctggcagcttacactccccataactaattgtaaggatc
actgtctacttactaagaaaggctgacaaaggtgattacaagagtgtgaa
tagcagaggctcatggagccagggcacctccctgcctgtgatttgcctgt
agagataaatggataatggatccggagtcatcttgcttgtcttccttcac
tatcgtgttcttgtagaataacactggcatttccagcctcgaaatgctac
tgtgaatatgttatgagtaaattctgtaagtactgtacagatgttaggtt
cttttaaattactagcacaaaacccataaaataaaaggacttatgtgaca
acacacacacacatctcgcacaacagtgtttgctgtgttggaaagttact
gagtactgatggtctggcattgtactccagctgtatcttaggaaataggg
gagaaatgtatgggatacatgcagctcacatggagaaatgattgttttag
tctcctgagagccacataaaacatatcataactgaatgatataaaacaaa
gtgtttactatctcagtgctcagagctagaagtctgaatcaatagctgtc
agagctagctgtctctgaggttctagaagattttgattttttgatgttcc
tgaagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_62693562_62694630
seq2: B6Ng01-250H05.b_44_1114

seq1  GAATTCACAAATGTATCCATTCTCTTTTCATACTGTCACTCATCAAACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAATGTATCCATTCTCTTTTCATACTGTCACTCATCAAACAT  50

seq1  TCAATGATATTTCAGAGACAAGCTAATGCAGATTATGTCTATAAAGTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGATATTTCAGAGACAAGCTAATGCAGATTATGTCTATAAAGTGAT  100

seq1  GTTGATAGTATAGATAATAAATGCATGGGTAACAAATATTATAGTATGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATAGTATAGATAATAAATGCATGGGTAACAAATATTATAGTATGCT  150

seq1  ATTATATAATATATAATATAATATAATATAATACACACACACACATATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATAATATATAATATAATATAATATAATACACACACACACATATAT  200

seq1  ATATATATATATATATATATATATATATATATATATATATATATTCCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATATATATATTCCATT  250

seq1  GGGATTTTGGTTGTTCAAGGTTTATCCTCTTCATGGCACACATCATAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTTGGTTGTTCAAGGTTTATCCTCTTCATGGCACACATCATAAGA  300

seq1  ATCAAGAAAAACAAATACTACAACCCACACCTGTGTCTATATTTGATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGAAAAACAAATACTACAACCCACACCTGTGTCTATATTTGATATA  350

seq1  CGATTTGTCTATCTATTAAGGTATTAAGCAATAAGTGGGGGCTTGTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTTGTCTATCTATTAAGGTATTAAGCAATAAGTGGGGGCTTGTTCTA  400

seq1  ATCCTTACAAACCTCACAAACAGGATAATAAAACCATACAAAATATATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTACAAACCTCACAAACAGGATAATAAAACCATACAAAATATATCA  450

seq1  AAGAGAACACCCCTGACAAAAGGAACTTACATAAGTATATCAGAAGTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAACACCCCTGACAAAAGGAACTTACATAAGTATATCAGAAGTACA  500

seq1  AGTCAACTCTGCTATTCTCAGATTTTAGTATTTATTTATTTATCCCACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAACTCTGCTATTCTCAGATTTTAGTATTTATTTATTTATCCCACTC  550

seq1  TGGTAACCCTTCTCAGTATTTCATGAATTATTCTCATTTTTATTTCAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAACCCTTCTCAGTATTTCATGAATTATTCTCATTTTTATTTCAATA  600

seq1  TCTTCATGTTCTTTTCCTTCTCATATGTTTTAACTTATGACTTTATTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATGTTCTTTTCCTTCTCATATGTTTTAACTTATGACTTTATTTCT  650

seq1  TGTTTCACTATTCCAACCATCATTAATTTCTTTTGGCACAACACATAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCACTATTCCAACCATCATTAATTTCTTTTGGCACAACACATAGGT  700

seq1  TCTACTGTGAAGAACCCAGTCCCTATGACACATAGTTTTCTGTGCCAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGTGAAGAACCCAGTCCCTATGACACATAGTTTTCTGTGCCAGCT  750

seq1  TATTCCATTCTCAATAGCCAGAACAGTATGGTGGGCTGAAAATAACATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCATTCTCAATAGCCAGAACAGTATGGTGGGCTGAAAATAACATCA  800

seq1  TGTTACATTTTTAGATGAACGATTGCATTCACACATTATGACATATAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACATTTTTAGATGAACGATTGCATTCACACATTATGACATATAAAA  850

seq1  TATTGCCAAAATCATGATATGAGTTATAAC-ATATTGATGAAGCTGTAAG  899
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TATTGCCAAAATCATGATATGAGTTATAACAATATTGATGAAGCTGTAAG  900

seq1  GTGTAAATAAGTCAATACA-CATAAAAC--TTTAAAAATTATG-CCAGAA  945
      ||||||||||||||||||| ||||||||  ||||||||||||| ||||||
seq2  GTGTAAATAAGTCAATACACCATAAAACCTTTTAAAAATTATGCCCAGAA  950

seq1  A--TGTGGTT-AGAGCTCATCAATGTT-ATACATAAAAGTAAAACTTGAA  991
      |   |||||| |||||||||||||||| |||||| |||||||||||||||
seq2  AATGGTGGTTAAGAGCTCATCAATGTTAATACAT-AAAGTAAAACTTGAA  999

seq1  TCAAGATTTTATGCAAGTTTTTTTTTTGTTTTTGTTTTTTTGTTGTTTTT  1041
      || ||| |||||||||||||||||||   ||||||||||||| ||||| |
seq2  TC-AGA-TTTATGCAAGTTTTTTTTTCTGTTTTGTTTTTTTGGTGTTTAT  1047

seq1  TTGTTTGTTTGTTTTAAATATAGGAATA  1069
      |   ||||||||||  || |||||||||
seq2  T--GTTGTTTGTTT--AAAATAGGAATA  1071

seq1: chr15_62851040_62852108
seq2: B6Ng01-250H05.g_65_1121 (reverse)

seq1  CTCTCTCAGGGACATCAAAAAAAATCAAAATCTTCTAGAACCCTCAGAGA  50
      |||| ||||| |||||  |||||||||||||||||||||| |||||||||
seq2  CTCT-TCAGGAACATC--AAAAAATCAAAATCTTCTAGAA-CCTCAGAGA  46

seq1  CAGCTTGGCTCTGACAGCTTATTGATTTCAGACTTCTAGCCTCCTGAGCA  100
      |||| | ||||||||||| |||||| ||||||||||||||   |||||||
seq2  CAGC-TAGCTCTGACAGC-TATTGA-TTCAGACTTCTAGC--TCTGAGCA  91

seq1  CTGAGATAGTAAACACTTTTTGTTTTATATCATTCAGTTATGATATGTTT  150
      ||||||||||||||||  ||||||||||||||||||||||||||||||||
seq2  CTGAGATAGTAAACAC--TTTGTTTTATATCATTCAGTTATGATATGTTT  139

seq1  TATGTGGCTCTCAGGAGACTAAAACAATCATTTCTCCATGTGAGCTGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGCTCTCAGGAGACTAAAACAATCATTTCTCCATGTGAGCTGCAT  189

seq1  GTATCCCATACATTTCTCCCCTATTTTCCTAAGATACAGCTGGAGTACAA  250
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTATCCCATACATTTCTCCCCTA-TTTCCTAAGATACAGCTGGAGTACAA  238

seq1  TGCCAGACCATCAGTACTCAGTAACTTTCCAACACAGCAAACACTGTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGACCATCAGTACTCAGTAACTTTCCAACACAGCAAACACTGTTGT  288

seq1  GCGAGATGTGTGTGTGTGTTGTCACATAAGTCCTTTTATTTTATGGGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGATGTGTGTGTGTGTTGTCACATAAGTCCTTTTATTTTATGGGTTT  338

seq1  TGTGCTAGTAATTTAAAAGAACCTAACATCTGTACAGTACTTACAGAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTAGTAATTTAAAAGAACCTAACATCTGTACAGTACTTACAGAATT  388

seq1  TACTCATAACATATTCACAGTAGCATTTCGAGGCTGGAAATGCCAGTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATAACATATTCACAGTAGCATTTCGAGGCTGGAAATGCCAGTGTT  438

seq1  ATTCTACAAGAACACGATAGTGAAGGAAGACAAGCAAGATGACTCCGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACAAGAACACGATAGTGAAGGAAGACAAGCAAGATGACTCCGGAT  488

seq1  CCATTATCCATTTATCTCTACAGGCAAATCACAGGCAGGGAGGTGCCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTATCCATTTATCTCTACAGGCAAATCACAGGCAGGGAGGTGCCCTG  538

seq1  GCTCCATGAGCCTCTGCTATTCACACTCTTGTAATCACCTTTGTCAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCATGAGCCTCTGCTATTCACACTCTTGTAATCACCTTTGTCAGCCT  588

seq1  TTCTTAGTAAGTAGACAGTGATCCTTACAATTAGTTATGGGGAGTGTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGTAAGTAGACAGTGATCCTTACAATTAGTTATGGGGAGTGTAAG  638

seq1  CTGCCAGGGTACATTTTAATCATATAGATTTTTTTAAGCTAAGAGCTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGGGTACATTTTAATCATATAGATTTTTTTAAGCTAAGAGCTTCA  688

seq1  ACCCAAGTTCCAAAACAGATGGAGAATCTCAGATTCATGACTGCCAGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGTTCCAAAACAGATGGAGAATCTCAGATTCATGACTGCCAGGCC  738

seq1  TGAGAAAGGCTATAGCAAATATGTTTTGGTGGGTGTATTGAACTCTTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAGGCTATAGCAAATATGTTTTGGTGGGTGTATTGAACTCTTTGT  788

seq1  CATCCCATGCTAACTGCCTGAGCCTTCTTTTCCCAAAAATACCTGCACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCATGCTAACTGCCTGAGCCTTCTTTTCCCAAAAATACCTGCACAG  838

seq1  ACTAGTACTACAGAATTATTTCCGCCCTGAGTCCTCATTAAATACCTATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTACTACAGAATTATTTCCGCCCTGAGTCCTCATTAAATACCTATA  888

seq1  CCAGCAGAGACAACGAGAGATGGAGTTTCATTTACACCCTGCATACCTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGAGACAACGAGAGATGGAGTTTCATTTACACCCTGCATACCTGA  938

seq1  GTGAAAACCTGCATTCAAGTAAAATCCCATTGTCTTTGAGAGGTGACTAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAACCTGCATTCAAGTAAAATCCCATTGTCTTTGAGAGGTGACTAA  988

seq1  GTAAGCAACAGTTGCGGTCAGACTTCCATGTACCAAAATTTAAAGGAGAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCAACAGTTGCGGTCAGACTTCCATGTACCAAAATTTAAAGGAGAT  1038

seq1  TGGAGTTTGAGAAGAATTC  1069
      |||||||||||||||||||
seq2  TGGAGTTTGAGAAGAATTC  1057