BAC Information

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BAC

Clone NameB6Ng01-250M03
Chromosome15 (Build37)
Map Location 76,148,178 - 76,298,839
singlet/doubletdoublet
Overlap geneExosc4, Gpaa1, Cyc1, Sharpin, Maf1, EG626280, Brp16, Tssk5, Bop1, Scx
Upstream geneLOC100041107, 9030619P08Rik, Ly6h, Gpihbp1, Zfp41, 2810039B14Rik, Top1mt, Rhpn1, Mafa, Zc3h3, LOC672572, Gsdmdc1, Naprt1, Eef1d, Tigd5, Pycrl, Tsta3, Zfp623, Eif2s3x-ps1, Zfp707, 2410075B13Rik, Mapk15, AA409316, K230010J24Rik, Scrib, 2410104I19Rik, Nrbp2, Eppk1, BC024139, Plec1, LOC671535, Grina, Spatc1, LOC100041269, Oplah
Downstream geneHsf1, Dgat1, Scrt1, LOC666497, EG666504, Fbxl6, Gpr172b, Adck5, Cpsf1, Slc39a4, Vps28, Nfkbil2, Cyhr1, Kifc2, Foxh1, Ppp1r16a, Gpt1, Mfsd3, Recql4, Lrrc14, Lrrc24, C030006K11Rik, D15Wsu169e, Zfp251, Zfp7, Commd5, Rpl8, Zfp647, 1110038F14Rik, Mb, Apol6, Rbm9, LOC100042318, Apol3, BC020489, BC085284, LOC624454, EG666639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250M03.bB6Ng01-250M03.g
ACCGA058214GA058215
length554898
definitionB6Ng01-250M03.b B6Ng01-250M03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,148,178 - 76,148,731)(76,297,948 - 76,298,839)
sequence
gaattctagtgcaatagaaacttctaagggagcggggctggaacgagata
aaaaggtttctgaagatagctacagtgtacttacatataataaataaata
aatcttaaaaaaaaaagaaagaaagaaaaaagaaactcccaggaatctat
aaggaatctataaggtgactctaagacacctagtaatggggaatatggag
cctgaactggccatctccagtaaccaggtaagactcccaatggaagaact
ggtaccccaacccagccacaaaagcttctttaacctacaattggtcctgc
ccacaagatgtgctggggtagaagtgtcacataaatcgtgagagtggcta
accaatgcctggtccagcttgagacccatgagagggagcccaccccggga
accagagactggacagctagaggcctacctaggatagaatcaaccacaaa
tggcaaaagaaaaaaaaaagtcaatgaaaagattgtgctatactcacaga
ttggtgcctagcctagttttcatcagagaggcttcacccagcaattgata
catc
gaattcccaaacctcaccattggagagcccaacccttgtcaaaggcctac
tagcatttggctcccccaggtatatgcttcattgtcccgcactggaaaag
tggggagacacggtgcaggctgctgagtttgcttcccacaggacgctgat
catggcctgtaggcactgccactgtgattcatgtaggtatagtccctggc
agagagcatttggaaggagatgtggcatgttatgggccctgcctgaggcc
agggctctgacacctgcttgggaacagtggctggccagagcttggtattg
taatgccactgtcccaggggcctgctgagcgcaggcagagtcagatgtgc
ctgcaagttgtgttcctggggcctcttgtgagctggggtttgcaacccat
ttttggtgtacagcaagaaagtgggggagatagagaaactgaatccttcc
ttgttccaagcctggagaaaaacttagtcttccatcctctttatactgaa
gggaaaaacaggccagagaagagtaggcctttggctcttgcctgggtaag
agggactggggctgtgggcgggggcgcccacacaccggggttcctgctcc
aagcactttactgccctcaggggtgagaggtgggcctgttttctccatca
gtttctggttctgccaataaacccgatctggtctgagccatccgcctccc
caggcaagggagaatctgttttccaggttgcggtgtgaatcctcccgtgg
cacccacttctgacctaggggacaaggtcagccttttcgttgcagctaat
ggtgggtgtggaaggtgcctggggtctgggcctcaggcaattttgggagt
cccaggaaatctttctaggcccttggccatctggtctgttctgaatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_76148178_76148731
seq2: B6Ng01-250M03.b_47_600

seq1  GAATTCTAGTGCAATAGAAACTTCTAAGGGAGCGGGGCTGGAACGAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTGCAATAGAAACTTCTAAGGGAGCGGGGCTGGAACGAGATA  50

seq1  AAAAGGTTTCTGAAGATAGCTACAGTGTACTTACATATAATAAATAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTTTCTGAAGATAGCTACAGTGTACTTACATATAATAAATAAATA  100

seq1  AATCTTAAAAAAAAAAGAAAGAAAGAAAAAAGAAACTCCCAGGAATCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTAAAAAAAAAAGAAAGAAAGAAAAAAGAAACTCCCAGGAATCTAT  150

seq1  AAGGAATCTATAAGGTGACTCTAAGACACCTAGTAATGGGGAATATGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATCTATAAGGTGACTCTAAGACACCTAGTAATGGGGAATATGGAG  200

seq1  CCTGAACTGGCCATCTCCAGTAACCAGGTAAGACTCCCAATGGAAGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACTGGCCATCTCCAGTAACCAGGTAAGACTCCCAATGGAAGAACT  250

seq1  GGTACCCCAACCCAGCCACAAAAGCTTCTTTAACCTACAATTGGTCCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCCCAACCCAGCCACAAAAGCTTCTTTAACCTACAATTGGTCCTGC  300

seq1  CCACAAGATGTGCTGGGGTAGAAGTGTCACATAAATCGTGAGAGTGGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAGATGTGCTGGGGTAGAAGTGTCACATAAATCGTGAGAGTGGCTA  350

seq1  ACCAATGCCTGGTCCAGCTTGAGACCCATGAGAGGGAGCCCACCCCGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGCCTGGTCCAGCTTGAGACCCATGAGAGGGAGCCCACCCCGGGA  400

seq1  ACCAGAGACTGGACAGCTAGAGGCCTACCTAGGATAGAATCAACCACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGACTGGACAGCTAGAGGCCTACCTAGGATAGAATCAACCACAAA  450

seq1  TGGCAAAAGAAAAAAAAAAGTCAATGAAAAGATTGTGCTATACTCACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAAGAAAAAAAAAAGTCAATGAAAAGATTGTGCTATACTCACAGA  500

seq1  TTGGTGCCTAGCCTAGTTTTCATCAGAGAGGCTTCACCCAGCAATTGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGCCTAGCCTAGTTTTCATCAGAGAGGCTTCACCCAGCAATTGATA  550

seq1  CATC  554
      ||||
seq2  CATC  554

seq1: chr15_76297948_76298839
seq2: B6Ng01-250M03.g_67_964 (reverse)

seq1  ACATTCAGAACAGACCGACTGGCCAAGGGCCTAGAGAGATTTCCT-GGAC  49
      ||||||||||||||||   |||||||||||||||| ||||||||| ||||
seq2  ACATTCAGAACAGACCAGATGGCCAAGGGCCTAGAAAGATTTCCTGGGAC  50

seq1  TCCCAAAATGCCTTGAGGCCCAGACCCCAGGCACCTTCCACACCCACCA-  98
      |||||||||  | |||||||||||||||||||||||||||||||||||| 
seq2  TCCCAAAATTGCCTGAGGCCCAGACCCCAGGCACCTTCCACACCCACCAT  100

seq1  TAGCTGCAACG-AAAGGCTGACCTTGTCCCCTAGGTCAG-AGTGGGTGCC  146
      ||||||||||| ||||||||||||||||||||||||||| ||||||||||
seq2  TAGCTGCAACGAAAAGGCTGACCTTGTCCCCTAGGTCAGAAGTGGGTGCC  150

seq1  AC-GGAGGATTCACACCGCAACCTGGAAAACAGATTCTCCCTTGCCTGGG  195
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGAGGATTCACACCGCAACCTGGAAAACAGATTCTCCCTTGCCTGGG  200

seq1  GAGGCGGATGGCTCAGACCAGATCGGGTTTATTGGCAGAACCAG-AACTG  244
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAGGCGGATGGCTCAGACCAGATCGGGTTTATTGGCAGAACCAGAAACTG  250

seq1  ATGGAGAAAACAGGCCCACCTCTCACCCCTGAGGGCAGTAAAGTGCTTGG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGAAAACAGGCCCACCTCTCACCCCTGAGGGCAGTAAAGTGCTTGG  300

seq1  AGCAGGAACCCCGGTGTGTGGGCGCCCCCGCCCACAGCCCCAGTCCCTCT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAACCCCGGTGTGTGGGCGCCCCCGCCCACAGCCCCAGTCCCTCT  350

seq1  TACCCAGGCAAGAGCCAAAGGCCTACTCTTCTCTGGCCTGTTTTTCCCTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGGCAAGAGCCAAAGGCCTACTCTTCTCTGGCCTGTTTTTCCCTT  400

seq1  CAGTATAAAGAGGATGGAAGACTAAGTTTTTCTCCAGGCTTGGAACAAGG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATAAAGAGGATGGAAGACTAAGTTTTTCTCCAGGCTTGGAACAAGG  450

seq1  AAGGATTCAGTTTCTCTATCTCCCCCACTTTCTTGCTGTACACCAAAAAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTCAGTTTCTCTATCTCCCCCACTTTCTTGCTGTACACCAAAAAT  500

seq1  GGGTTGCAAACCCCAGCTCACAAGAGGCCCCAGGAACACAACTTGCAGGC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGCAAACCCCAGCTCACAAGAGGCCCCAGGAACACAACTTGCAGGC  550

seq1  ACATCTGACTCTGCCTGCGCTCAGCAGGCCCCTGGGACAGTGGCATTACA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGACTCTGCCTGCGCTCAGCAGGCCCCTGGGACAGTGGCATTACA  600

seq1  ATACCAAGCTCTGGCCAGCCACTGTTCCCAAGCAGGTGTCAGAGCCCTGG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAAGCTCTGGCCAGCCACTGTTCCCAAGCAGGTGTCAGAGCCCTGG  650

seq1  CCTCAGGCAGGGCCCATAACATGCCACATCTCCTTCCAAATGCTCTCTGC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGCAGGGCCCATAACATGCCACATCTCCTTCCAAATGCTCTCTGC  700

seq1  CAGGGACTATACCTACATGAATCACAGTGGCAGTGCCTACAGGCCATGAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACTATACCTACATGAATCACAGTGGCAGTGCCTACAGGCCATGAT  750

seq1  CAGCGTCCTGTGGGAAGCAAACTCAGCAGCCTGCACCGTGTCTCCCCACT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTCCTGTGGGAAGCAAACTCAGCAGCCTGCACCGTGTCTCCCCACT  800

seq1  TTTCCAGTGCGGGACAATGAAGCATATACCTGGGGGAGCCAAATGCTAGT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGTGCGGGACAATGAAGCATATACCTGGGGGAGCCAAATGCTAGT  850

seq1  AGGCCTTTGACAAGGGTTGGGCTCTCCAATGGTGAGGTTTGGGAATTC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTTGACAAGGGTTGGGCTCTCCAATGGTGAGGTTTGGGAATTC  898