BAC Information

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BAC

Clone NameB6Ng01-251E22
Chromosome15 (Build37)
Map Location 8,584,663 - 8,719,063
singlet/doubletdoublet
Overlap geneSlc1a3
Upstream geneGdnf, Wdr70, LOC665556, LOC621001, Nup155, 2410089E03Rik, LOC100039599, Nipbl, EG666437, LOC100039560, LOC100039633
Downstream geneEG622770, LOC268781, LOC382969, LOC100039619, Ranbp3l, 1110020G09Rik, Skp2, Lmbrd2, LOC666503, Ugt3a1, LOC100039661, Ugt3a2, LOC383094, Capsl, Il7r, C230086A09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251E22.bB6Ng01-251E22.g
ACCGA058599GA058600
length1,120691
definitionB6Ng01-251E22.b B6Ng01-251E22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,717,939 - 8,719,063)(8,584,663 - 8,585,352)
sequence
gaattcacagagatctgcctgaggtgggcaccatcatgtccagcttcttt
agttgtttttagtaatattttgatatttttcagcatacagattttacatt
ccttttgctaaatttttctaaatgtttcaatcctggagtgctatgttaac
aagcattgtcctaataatttctctttgaatttgttctctgtttctctgta
tttgtctaatttagatttgtatatcaggtttgtattgtgtcatcttgatg
aaattgtttcttctaatagtttgtggtgaattcgttaatgtgattttgct
attttaaccaagaggtttgagtctttgggaggaaaaaaaaaaggaaatca
ctgttttgaaaggctgagtagggagcaaatcgagaatgaggatcataacc
ttgctcctgaatagatatggacacaggcagaaaggatggaatagatacgg
acacagaagcagaaaggatggaagtacactggaagtgggtcacaagtagc
accaccttctatcgcctcctaagaaggtggttttaaacatctggaatgta
ctcaatactgggctaggaacaaaaggaactcaaagaaggttgagttctta
tctttgttcttacagagtttaggtatgtccaaggcagacattcgcaaacc
gtcactttatctgcggacaaaaaccatcacattatctaccgaaggcatgt
tccaagacctcagggtggtgtctgaaaccactcataacaccaagcccaat
ccccacacagttttttgtgcttaacagtcctaagataaaggttcaattgt
aagtacagtataatattagcaacaataatagtaacagaataattatgact
acagagtaatataaattctttcattacactactcagaatgccatactagt
tgaaacttatgaactgattatttctggacttttctagtttcctatttccc
gggctctgggctgaccacaagtgactgtgaggttgaggaagacagaacca
cagatggaatctgcaagagttggagcggtgggggtttggaagggttactg
caaaggaatttaaggccggtccaccgtggtaattgcagcaatggtgggtc
ctgaaggagttgctattctc
gaattctcctgctgtgttttcttccatcctcagtgatgttatcctcatgc
tgattcatctgtctttttttttttttttttttggtagggacataaacaag
cacactccactctagatgagacttttgaatgatttgtcaagagacatctc
tatacaaaaaagagtatgttgtttttgtcatcctaagaacgcctggttaa
aatagtaaaaacaaaacaaataaaaaaaccaaaaaaaaaaaatctttttc
agaaatgagaccatccacccagcgtatggatctgtcccagagatgtggtt
ggttggactgggagatgaggaggaagtggtgttatgacgtcgtttctttg
ggggctgattagggactgaagaggaagtgtttaggctaacagaaaaaggg
ttgagatatagctctccattttagtctttaaagaaaaccaacttttcctg
atctttcaaagaatcctcccttttgtaatgttggccatactctattcttt
ctccactctttagtgttccacactaagacttgagcacacttgctagtctt
ctctttatttcctagacatctaattgaagagactgtcttcccttggattt
gggaagtgtaccccagaagggagggcctctagtattgggaaaacaaaaca
ggacaataggccttctaggatggccttcctcctgtctactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_8717939_8719063
seq2: B6Ng01-251E22.b_48_1167 (reverse)

seq1  GAGAATTAGCCACTCTTTCAGGGACCCCACCATTGCTGCATTTACCAACG  50
      ||||| |||| |||| ||||||   ||||||||||||||| ||||||  |
seq2  GAGAA-TAGCAACTCCTTCAGG--ACCCACCATTGCTGCAATTACCACGG  47

seq1  TGTGGCCGGCCCTAAATTTCCCTTTGCAGTAACCCTTTCCAAACCCCACC  100
      || | |||||| ||||||  ||||||||||||||||| | || |||||||
seq2  TG-GACCGGCCTTAAATT--CCTTTGCAGTAACCCTTCCAAACCCCCACC  94

seq1  GCTCCCACCTCTTTCCAGATTCCATCTGTGGTTCTGTCTTCCTCAACCTC  150
      ||| ||| ||| || |||||||||||||||||||||||||||||||||||
seq2  GCT-CCAACTC-TTGCAGATTCCATCTGTGGTTCTGTCTTCCTCAACCTC  142

seq1  ACAGTCACCTGTGGTCAG-CCAGAGCCC-GGAAATAGG-AACTAGAAAAG  197
      |||||||| ||||||||| ||||||||| ||||||||| |||||||||||
seq2  ACAGTCACTTGTGGTCAGCCCAGAGCCCGGGAAATAGGAAACTAGAAAAG  192

seq1  TCCAGAAATAATCAGTTCATAAGTTTCAACTAGTATGGCATTCTGAGTAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAATAATCAGTTCATAAGTTTCAACTAGTATGGCATTCTGAGTAG  242

seq1  TGTAATGAAAGAATTTATATTACTCTGTAGTCATAATTATTCTGTTACTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGAAAGAATTTATATTACTCTGTAGTCATAATTATTCTGTTACTA  292

seq1  TTATTGTTGCTAATATTATACTGTACTTACAATTGAACCTTTATCTTAGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTTGCTAATATTATACTGTACTTACAATTGAACCTTTATCTTAGG  342

seq1  ACTGTTAAGCACAAAAAACTGTGTGGGGATTGGGCTTGGTGTTATGAGTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTAAGCACAAAAAACTGTGTGGGGATTGGGCTTGGTGTTATGAGTG  392

seq1  GTTTCAGACACCACCCTGAGGTCTTGGAACATGCCTTCGGTAGATAATGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGACACCACCCTGAGGTCTTGGAACATGCCTTCGGTAGATAATGT  442

seq1  GATGGTTTTTGTCCGCAGATAAAGTGACGGTTTGCGAATGTCTGCCTTGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTTTTGTCCGCAGATAAAGTGACGGTTTGCGAATGTCTGCCTTGG  492

seq1  ACATACCTAAACTCTGTAAGAACAAAGATAAGAACTCAACCTTCTTTGAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCTAAACTCTGTAAGAACAAAGATAAGAACTCAACCTTCTTTGAG  542

seq1  TTCCTTTTGTTCCTAGCCCAGTATTGAGTACATTCCAGATGTTTAAAACC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTGTTCCTAGCCCAGTATTGAGTACATTCCAGATGTTTAAAACC  592

seq1  ACCTTCTTAGGAGGCGATAGAAGGTGGTGCTACTTGTGACCCACTTCCAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTTAGGAGGCGATAGAAGGTGGTGCTACTTGTGACCCACTTCCAG  642

seq1  TGTACTTCCATCCTTTCTGCTTCTGTGTCCGTATCTATTCCATCCTTTCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTCCATCCTTTCTGCTTCTGTGTCCGTATCTATTCCATCCTTTCT  692

seq1  GCCTGTGTCCATATCTATTCAGGAGCAAGGTTATGATCCTCATTCTCGAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGTCCATATCTATTCAGGAGCAAGGTTATGATCCTCATTCTCGAT  742

seq1  TTGCTCCCTACTCAGCCTTTCAAAACAGTGATTTCCTTTTTTTTTTCCTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCCCTACTCAGCCTTTCAAAACAGTGATTTCCTTTTTTTTTTCCTC  792

seq1  CCAAAGACTCAAACCTCTTGGTTAAAATAGCAAAATCACATTAACGAATT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGACTCAAACCTCTTGGTTAAAATAGCAAAATCACATTAACGAATT  842

seq1  CACCACAAACTATTAGAAGAAACAATTTCATCAAGATGACACAATACAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACAAACTATTAGAAGAAACAATTTCATCAAGATGACACAATACAAA  892

seq1  CCTGATATACAAATCTAAATTAGACAAATACAGAGAAACAGAGAACAAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATATACAAATCTAAATTAGACAAATACAGAGAAACAGAGAACAAAT  942

seq1  TCAAAGAGAAATTATTAGGACAATGCTTGTTAACATAGCACTCCAGGATT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAGAAATTATTAGGACAATGCTTGTTAACATAGCACTCCAGGATT  992

seq1  GAAACATTTAGAAAAATTTAGCAAAAGGAATGTAAAATCTGTATGCTGAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATTTAGAAAAATTTAGCAAAAGGAATGTAAAATCTGTATGCTGAA  1042

seq1  AAATATCAAAATATTACTAAAAACAACTAAAGAAGCTGGACATGATGGTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCAAAATATTACTAAAAACAACTAAAGAAGCTGGACATGATGGTG  1092

seq1  CCCACCTCAGGCAGATCTCTGTGAATTC  1125
      ||||||||||||||||||||||||||||
seq2  CCCACCTCAGGCAGATCTCTGTGAATTC  1120

seq1: chr15_8584663_8585352
seq2: B6Ng01-251E22.g_69_759

seq1  GAATTCTCCTGCTGTGTTTTCTTCCATCCTCAGTGATGTTATCCTCATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGCTGTGTTTTCTTCCATCCTCAGTGATGTTATCCTCATGC  50

seq1  TGATTCATCTGTCTTTTTTTTTTTTTTTTTTTGGTAGGGACATAAACAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCATCTGTCTTTTTTTTTTTTTTTTTTTGGTAGGGACATAAACAAG  100

seq1  CACACTCCACTCTAGATGAGACTTTTGAATGATTTGTCAAGAGACATCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCCACTCTAGATGAGACTTTTGAATGATTTGTCAAGAGACATCTC  150

seq1  TATACAAAAAAGAGTATGTTGTTTTTGTCATCCTAAGAACGCCTGGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAAAAAAGAGTATGTTGTTTTTGTCATCCTAAGAACGCCTGGTTAA  200

seq1  AATAGTAAAAACAAAACAAATAAAAAAACCAAAAAAAAAAAATCTTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTAAAAACAAAACAAATAAAAAAACCAAAAAAAAAAAATCTTTTTC  250

seq1  AGAAATGAGACCATCCACCCAGCGTATGGATCTGTCCCAGAGATGTGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGAGACCATCCACCCAGCGTATGGATCTGTCCCAGAGATGTGGTT  300

seq1  GGTTGGACTGGGAGATGAGGAGGAAGTGGTGTTATGACGTCGTTTCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGACTGGGAGATGAGGAGGAAGTGGTGTTATGACGTCGTTTCTTTG  350

seq1  GGGGCTGATTAGGGACTGAAGAGGAAGTGTTTAGGCTAACAGAAAAAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTGATTAGGGACTGAAGAGGAAGTGTTTAGGCTAACAGAAAAAGGG  400

seq1  TTGAGATATAGCTCTCCATTTTAGTCTTTAAAGAAAACCAACTTTTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATATAGCTCTCCATTTTAGTCTTTAAAGAAAACCAACTTTTCCTG  450

seq1  ATCTTTCAAAGAATCCTCCCTTTTGTAATGTTGGCCATACTCTATTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCAAAGAATCCTCCCTTTTGTAATGTTGGCCATACTCTATTCTTT  500

seq1  CTCCACTCTTTAGTGTTCCACACTAAGACTTGAGCACACTTGCTAGTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTCTTTAGTGTTCCACACTAAGACTTGAGCACACTTGCTAGTCTT  550

seq1  CTCTTTATTTCCTAGACATCTAATTGAAGAGACTGTCTTCCCTTGGATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTATTTCCTAGACATCTAATTGAAGAGACTGTCTTCCCTTGGATTT  600

seq1  GGGAAGTGTACCCCAGAAGGGAGGGCCTCTAGTATT-GGAAAACAAAACA  649
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGGAAGTGTACCCCAGAAGGGAGGGCCTCTAGTATTGGGAAAACAAAACA  650

seq1  GGACAATAGGCCTTCTAGGATGGCCTTCCACCTGTCTACTG  690
      ||||||||||||||||||||||||||||| |||||||||||
seq2  GGACAATAGGCCTTCTAGGATGGCCTTCCTCCTGTCTACTG  691