MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-251N08
Chromosome	3 (Build37)	15 (Build37)
Map Location	33,986,051 - 33,986,281	93,206,950 - 93,207,042
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	EG545512, LOC100041058, Ttc14, Ccdc39, LOC100040232, LOC100041072, Fxr1h, Dnajc19
Downstream gene	LOC435727, EG665636, EG622074, Sox2, LOC100041108
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG545512 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545512 MGI:3649050
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 mRNAs, 1367 ESTs, 13 Proteins

name	LOC100041058 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041058
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	Ttc14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67120 MGI:1914370
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ccdc39 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:51938 MGI:1289263
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040232 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040232
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 357 ESTs, 7 Proteins

name	LOC100041072 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041072
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Fxr1h (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14359 MGI:104860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnajc19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67713 MGI:1914963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC435727 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435727
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins pseudo : _no_value

name	EG665636 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665636 MGI:3645089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG622074 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622074 MGI:3643461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Sox2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20674 MGI:98364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041108 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041108
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG545512 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250877 GeneID:545512 MGI:3649050
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 mRNAs, 1367 ESTs, 13 Proteins product : predicted gene, EG545512 transcript_id : XM_001475688.1

name	LOC100041058 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250879 GeneID:100041058
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to heterochromatin protein 1, binding protein 3 transcript_id : XM_001475724.1

name	Ttc14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114687666 GeneID:67120 MGI:1914370
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 14 transcript_id : NM_025978.3

name	Ttc14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114687674 GeneID:67120 MGI:1914370
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 14 transcript_id : NM_027619.3

name	Ccdc39 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114687665 GeneID:51938 MGI:1289263
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 39 transcript_id : NM_026222.2

name	LOC100040232 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250839 GeneID:100040232
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 357 ESTs, 7 Proteins product : similar to calcium-regulated heat-stable protein (24kD) transcript_id : XM_001474886.1

name	LOC100041072 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250881 GeneID:100041072
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041072 transcript_id : XM_001475742.1

name	Fxr1h (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:17998693 GeneID:14359 MGI:104860
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fragile X mental retardation gene 1, autosomal homolog transcript_id : NM_008053.1

name	Dnajc19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71061473 GeneID:67713 MGI:1914963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily C, member 19 transcript_id : NM_001026211.1

name	Dnajc19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71061476 GeneID:67713 MGI:1914963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily C, member 19 transcript_id : NM_026332.3

name	EG665636 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250884 GeneID:665636 MGI:3645089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG665636 transcript_id : XM_978322.2

name	EG622074 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369484 GeneID:622074 MGI:3643461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG622074 transcript_id : XM_897430.2

name	Sox2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:127140985 GeneID:20674 MGI:98364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SRY-box containing gene 2 transcript_id : NM_011443.3

name	LOC100041108 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250886 GeneID:100041108
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041108 transcript_id : XM_001475810.1

name	EG545512 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250878 GeneID:545512 MGI:3649050
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475738.1

name	LOC100041058 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250880 GeneID:100041058
definition	codon_start : 1 product : similar to heterochromatin protein 1, binding protein 3 protein_id : XP_001475774.1

name	Ttc14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110611921 GeneID:67120 MGI:1914370
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : tetratricopeptide repeat domain 14 isoform a protein_id : NP_081895.2

name	Ttc14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29336051 CCDS:CCDS17303.1 GeneID:67120 MGI:1914370
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : tetratricopeptide repeat domain 14 isoform b protein_id : NP_080254.2

name	Ccdc39 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312922 CCDS:CCDS17304.1 GeneID:51938 MGI:1289263
definition	codon_start : 1 product : coiled-coil domain containing 39 protein_id : NP_080498.1

name	LOC100040232 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250840 GeneID:100040232
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474936.1

name	LOC100041072 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250882 GeneID:100041072
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475792.1

name	Fxr1h (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17998694 GeneID:14359 MGI:104860
definition	GO_component : GO:0043034 - costamere [Evidence IDA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007517 - muscle development [Evidence IMP]; GO:0007519 - striated muscle development [Evidence IEA] codon_start : 1 note : fragile X mental retardation gene, autosomal homolog product : fragile X mental retardation gene 1, autosomal homolog protein_id : NP_032079.1

name	Dnajc19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71061474 GeneID:67713 MGI:1914963
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : translocase of the inner mitochondrial membrane 14 isoform 2 protein_id : NP_001021382.1

name	Dnajc19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71061477 GeneID:67713 MGI:1914963
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : translocase of the inner mitochondrial membrane 14 isoform 1 protein_id : NP_080608.3

name	EG665636 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250885 GeneID:665636 MGI:3645089
definition	codon_start : 1 product : hypothetical protein protein_id : XP_983416.2

name	EG622074 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82889101 GeneID:622074 MGI:3643461
definition	codon_start : 1 product : hypothetical protein protein_id : XP_902523.1

name	Sox2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:127140986 GeneID:20674 MGI:98364
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IDA] [Evidence IGI]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0001708 - cell fate specification [Evidence IMP]; GO:0050973 - detection of mechanical stimulus during equilibrioception [Evidence IMP]; GO:0050910 - detection of mechanical stimulus during sensory perception of sound [Evidence IMP]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0046148 - pigment biosynthesis [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0007605 - sensory perception of sound [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : sex-determining region Y-box 2 protein_id : NP_035573.3

name	LOC100041108 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250887 GeneID:100041108
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475860.1

name	LOC435727 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250883 GeneID:435727
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins product : similar to Ab1-115 pseudo : _no_value transcript_id : XR_032419.1

clone name	MSMg01-203N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066L08
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-251N08.b	B6Ng01-251N08.g
ACC	GA058989	GA058990
length	979	690
definition	B6Ng01-251N08.b	B6Ng01-251N08.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(33,986,051 - 33,986,281)	(93,206,950 - 93,207,042)
sequence	gaattctttgttcaagtttgtgatattcaggggattttcacatttcatct tagttattaagtatgttgatatagttctatttacaatattgtcagtctta atagatgagatctagcatgtttggaattgtatggccatggccacctcagt ctttctgggctctatagtgatattcctgatttatcattgatactgtatac ttactcctttgttttgatcacttctattagtaatatttttatcatttgct ttcaaattgatgaaatttatttttctctttttttattagatattttcttt atttacatttcaaatgttatcccctttcttagtgtaccctctgtcttagt cagggtttctagtcctgcacaaacatcatgaccaagaagcaagttgggga gaaaagggtttatttagcttacactttccacattgctgttaatcactgaa ggatgtcaggattggaactcaagcaggtcaggaagcaggaactgatgcag aggccatggagggatgttactggcttgcttcccctggcttgctcagcctg ctctcttatagaacccaagactaccagcctagagatggtccaactcacaa ggtgcctctctcccttgatcactaattgagaaaatgccccacagctggat ctcatggaggcatttccccaaatgaagctccttactctgtgataactcca gcttgtgtcaagttgacacagaactagccagtatgccttccaaaaatccc ctatcccctctccctgcctcgttcaccaacctacccactcctacttcctg gccctggcatttgcctttactggggcacagaaccttcacaggaccagggc ctctcctcccattgatgactgactaggccatcctctgctacatatacagc tagagccatgagtctctctgtgtgttttctttgattggtggtttagtccc agggagctctggggggtactgggtttgtt	gaattctctgtttagatctgcaccccatttttaattggattatttgttga tatcttgtattttgaattcttcatatattttagatactagtcatctattg gtgggtgaagttggtaaaaatcatcttccatttgtagactgtcattttgt cctgttgatggtgtcctttctcttatagattttcagtttcatgagaattg aattattaattgttgatcttaatgcttatgagtgtgctgcttagaaagtt gtttcttgtatccatgcagtaaaggtgattccctaattttccttctatca ggattaatgtaagtggttttaggttgaggtctttgatccatgtggagttg atttttctgcaggttaagtacagatctttttgtactcttctacatgtgga catccagtttaaccagcatcatttgttgaagatgatcttttttttccagt gtgtgtttctggactacttatgtacattaagtgtgtagatttatgtctgg gtcttcaagtctatttcattaatcaatatgtcctttttataacaacatta catgacttttattattatagctatggagtataacttgaaattagtaatgg tgatgcttttagtagttcttttattgttcaggattgttttagttatcctg ggttttggtttttttttgtttgtttgtttgtttttgtttg
quality values	Open. Hide. 58 31 22 22 58 54 54 62 62 62 62 62 31 20 41 54 62 62 62 54 47 62 47 47 62 47 62 47 38 62 62 11 12 10 5 13 13 38 28 39 29 21 28 28 30 43 49 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 24 28 21 23 25 27 34 48 56 59 62 42 62 56 54 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 56 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 49 43 49 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 44 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 39 36 62 47 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 54 62 62 62 62 54 58 58 58 54 58 58 41 58 42 54 58 54 58 50 58 58 58 58 58 52 54 43 58 58 47 58 46 45 38 58 58 54 58 48 50 47 41 52 52 54 54 42 54 54 58 54 58 58 58 58 52 58 54 58 52 58 58 58 54 58 45 49 58 54 54 48 58 54 46 58 58 58 42 58 58 58 47 46 45 37 58 47 47 46 51 49 50 48 50 51 58 47 50 52 54 46 40 53 58 58 45 22 32 48 50 54 58 51 50 58 58 54 50 58 50 51 58 58 58 46 51 51 50 54 48 46 50 49 42 40 51 58 53 53 47 37 50 54 50 54 49 48 36 41 51 51 52 51 51 54 49 40 29 51 52 53 58 51 47 38 50 50 50 27 58 51 40 50 30 39 58 50 37 50 52 36 46 50 42 39 49 40 50 43 26 58 54 54 51 52 42 33 51 54 38 53 40 30 54 46 49 51 54 41 30 54 50 34 47 40 44 28 31 45 53 35 42 39 37 54 40 39 37 51 37 40 28 54 47 45 41 39 39 35 33 40 37 37 51 29 54 34 53 54 30 54 46 31 45 33 17 32 30 54 33 31 53 45 53 53 34 35 32 32 53 52 53 53 31 32 33 31 20 53 32 16 32 36 45 32 35 33 28 25 37 15 15 25 33 13 46 36 28 30 26 32 26 30 31 31 28 46 23 30 31 45 33 33 35 36 32 23 30 28 24 23 31 27 7 51 23 27 26 34 31 32 32 30 34 41 31 31 28 31 25 31 31 38 31 31 31 26 22 25 31 31 41 28 34 29 31 31 32 37 22 37 37 34 34 31 30 29 39 29 43 29 38 25 46 48 31 39 27 48 31 33 43 25 38 31 46 23 30 34 21 44 14 36 11 19 17 48 38 17 15 37 17 22 16 32 38 34 24 9 44 44 38 44 30 11 28 32 31 24 28 14 33 44 15 31 24 33	Open. Hide. 62 47 51 44 62 62 62 62 62 62 18 18 16 16 10 22 23 27 28 24 32 28 33 45 59 62 59 62 62 62 62 59 62 62 62 62 62 62 59 59 59 62 59 62 62 62 62 62 62 59 62 62 62 62 50 43 48 28 32 46 51 56 48 38 56 56 56 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 56 37 43 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 58 58 58 52 52 54 58 58 49 42 58 58 46 58 58 52 54 54 58 58 58 58 58 58 58 58 54 54 58 54 54 58 58 54 58 54 58 58 58 58 58 58 58 58 58 54 54 54 45 38 58 58 58 54 58 58 54 58 58 41 48 58 54 54 58 48 49 58 58 51 58 58 58 58 58 49 52 40 51 58 51 51 51 52 47 58 58 58 52 42 58 58 32 58 58 42 51 58 46 42 58 58 49 58 58 58 58 39 58 50 50 54 58 58 51 58 48 41 43 58 58 58 41 38 36 58 58 54 58 58 58 58 58 58 35 58 50 58 32 58 39 33 23 58 58 51 32 58 58 50 50 54 39 41 29 14

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_33986051_33986281
seq2: B6Ng01-251N08.b_550_778 (reverse)

seq1  TGGCTAGTTTTGTGTCAACTTGACAC-AGCTGGAGTTATCAGAGAGAAAG  49
      ||||||||| |||||||||||||||| |||||||||||||| |||| |||
seq2  TGGCTAGTTCTGTGTCAACTTGACACAAGCTGGAGTTATCACAGAGTAAG  50

seq1  GAGCTTCAGTTGGGGAAATGCCTCCATGAGATCCAACTGTAAGGCATTTT  99
      |||||||| |||||||||||||||||||||||||| ||||  ||||||||
seq2  GAGCTTCATTTGGGGAAATGCCTCCATGAGATCCAGCTGTGGGGCATTTT  100

seq1  CTCAATTAGTGATCAAGGGGGAAAGGGCCCTTGTGGGTGGGACCATCTCT  149
      ||||||||||||||||||| || |||  ||||||| || |||||||||||
seq2  CTCAATTAGTGATCAAGGGAGAGAGGCACCTTGTGAGTTGGACCATCTCT  150

seq1  GGGCTGGTAGTCTT-GGTTCTATAAGAGAGCAGGCTGATCAAGCCAGGGA  198
       ||||||||||||| ||||||||||||||||||||||| |||||||||| 
seq2  AGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGGG  200

seq1  AAGCAAGCCAGTAAAGAACATACCTCCATGGAC  231
      ||||||||||||    ||||| ||||||||| |
seq2  AAGCAAGCCAGT----AACATCCCTCCATGGCC  229

seq1: chr15_93206950_93207042
seq2: B6Ng01-251N08.g_719_757 (reverse)

seq1  CAAACTCAAAACACGGTAGACAGAAACAAAATGAAGGACAAGAAACTGGT  50
                                                ||||    
seq2  -----------------------------------------CAAAC----  5

seq1  TTTACTCGAAAAAACAAACAAACAAACAAAAAAAAACCAAAAC  93
               ||||||||||||||||||||||||||||||||||
seq2  ---------AAAAACAAACAAACAAACAAAAAAAAACCAAAAC  39

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information