BAC Information

Click to search

BAC

Clone NameB6Ng01-251N18
Chromosome15 (Build37)
Map Location 64,838,239 - 64,839,336
singlet/doubletsinglet
Overlap genenone
Upstream gene0910001A06Rik, Ddef1, Adcy8
Downstream geneLOC268812, LOC100040790, LOC665836, C920006C10Rik, Oc90, F930104E18Rik, LOC100040835, Kcnq3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251N18.bB6Ng01-251N18.g
ACCGA059009GA059010
length1,1031,031
definitionB6Ng01-251N18.b B6Ng01-251N18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtctgcaatttcatatgtcattttcattagccaccattaat
atgtgtttgataatttgttaaggagacagtttgtttttatgtttatttgg
agtacaaaaagaaatacttgtatcttatcatagttgagcaaacatttttg
tccatacttggtgttctttttccttgttcgatcttggctggtttcagtga
agcttcaacttcattgtggaaagacttggctcatgactggagtccttgaa
agcaattctggttctgtgttgaggcaaggtctctgataccataaaccata
aagagtgccatgtagtgtaggattggactgggatagagatggttttatgt
gtcctctaatctttagagatgaggtctgtaaagtgtgggagttgaggttg
aaggtggaacactgtaacttctaactccacaaactgaggtatatgtagaa
cattgtatgtgcatgccaagtgtagatggatcacatccacttacttccat
ggtcaaggagagtttgtccagggcagaggtatatcttgggaaaaaaatgg
aggtgaggctcctttgacttcaccagatggatgtatatgaaagaagttgc
tatgtggcctgttgactaggattggcttgttgagtgctcaaggtgtgttc
tagagtcagaaggcagaagtctgaatcatatctgtctgtgactggagttc
catcatcaccaccatcactacttcaaccaccacggccatcaccatcaaca
actttgtcattattgtcatcatcactatcattatcctcactaccaccatc
accaccaccaccagcagcagcagcagcagcataggcagcaatattacaat
gtgggcacatatttctccttttttgggtgattttataacaatgtattttt
gtctttcatttttaaattctttaaagcagtgggttcttaaccagtgaccc
cattaggaatcatatatcagatatctacattatactttataggcaataac
aaaagtacaggtattttatgggtggagatcatggatatgagaaactctat
taagggtaaaggtcatagcataagggagttttaagaacctacttaaaggt
ttc
gaattctcacctgaggaatgccgaatggctgggaaacacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaatattcagatgacagc
agatgctagcgaggatgtggataaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggccgtttctca
gaaaattggacatggtactaccagaggatcccacaatacctctcctgggc
atatatccagaagatgttccaactagtaagaaagaaacatgctccactat
gttcataacagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttataaaatttttaatta
aaatataatttcatcattttattcctttcctctttcaatcccttccatgt
ttcctccctctatcccgtctcctatttttccctacccttaaattgatggc
cttctttttttattattatcattatacatatgtatatataaatacataaa
tatatcaatacaatgtgctgagttcatttagtgtggtttgtagatatatg
atttcaggaatactttgtattggataaccaattaggaacatatctctggg
tgaaactaattctccatctcttagttgtttttagttccttgtctaaggtt
ggaaccctgtgaagtctccatctttaatatgagcatatgtattggtattg
ctgttgttctttcttgttcaagcagccgtgttgttgaaatagcatgaatg
tagcttatctgtcatttataagagacataatctcacagcagacatcctgg
cccctttgggttcttctgctgtgccctttgagttttagtttaggagtgtg
ttgtcttccacctatgcaatcatctatcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_64838239_64839336
seq2: B6Ng01-251N18.b_48_1150

seq1  GAATTCTTTGTCTGCAATTTCATATGTCATTTTCATTAGCCACCATTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTCTGCAATTTCATATGTCATTTTCATTAGCCACCATTAAT  50

seq1  ATGTGTTTGATAATTTGTTAAGGAGACAGTTTGTTTTTATGTTTATTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTTGATAATTTGTTAAGGAGACAGTTTGTTTTTATGTTTATTTGG  100

seq1  AGTACAAAAAGAAATACTTGTATCTTATCATAGTTGAGCAAACATTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAAAAGAAATACTTGTATCTTATCATAGTTGAGCAAACATTTTTG  150

seq1  TCCATACTTGGTGTTCTTTTTCCTTGTTCGATCTTGGCTGGTTTCAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATACTTGGTGTTCTTTTTCCTTGTTCGATCTTGGCTGGTTTCAGTGA  200

seq1  AGCTTCAACTTCATTGTGGAAAGACTTGGCTCATGACTGGAGTCCTTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCAACTTCATTGTGGAAAGACTTGGCTCATGACTGGAGTCCTTGAA  250

seq1  AGCAATTCTGGTTCTGTGTTGAGGCAAGGTCTCTGATACCATAAACCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTCTGGTTCTGTGTTGAGGCAAGGTCTCTGATACCATAAACCATA  300

seq1  AAGAGTGCCATGTAGTGTAGGATTGGACTGGGATAGAGATGGTTTTATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGCCATGTAGTGTAGGATTGGACTGGGATAGAGATGGTTTTATGT  350

seq1  GTCCTCTAATCTTTAGAGATGAGGTCTGTAAAGTGTGGGAGTTGAGGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTAATCTTTAGAGATGAGGTCTGTAAAGTGTGGGAGTTGAGGTTG  400

seq1  AAGGTGGAACACTGTAACTTCTAACTCCACAAACTGAGGTATATGTAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGAACACTGTAACTTCTAACTCCACAAACTGAGGTATATGTAGAA  450

seq1  CATTGTATGTGCATGCCAAGTGTAGATGGATCACATCCACTTACTTCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTATGTGCATGCCAAGTGTAGATGGATCACATCCACTTACTTCCAT  500

seq1  GGTCAAGGAGAGTTTGTCCAGGGCAGAGGTATATCTTGGGAAAAAAATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAGGAGAGTTTGTCCAGGGCAGAGGTATATCTTGGGAAAAAAATGG  550

seq1  AGGTGAGGCTCCTTTGACTTCACCAGATGGATGTATATGAAAGAAGTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGGCTCCTTTGACTTCACCAGATGGATGTATATGAAAGAAGTTGC  600

seq1  TATGTGGCCTGTTGACTAGGATTGGCTTGTTGAGTGCTCAAGGTGTGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGCCTGTTGACTAGGATTGGCTTGTTGAGTGCTCAAGGTGTGTTC  650

seq1  TAGAGTCAGAAGGCAGAAGTCTGAATCATATCTGTCTGTGACTGGAGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTCAGAAGGCAGAAGTCTGAATCATATCTGTCTGTGACTGGAGTTC  700

seq1  CATCATCACCACCATCACTACTTCAACCACCACGGCCATCACCATCAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCACCACCATCACTACTTCAACCACCACGGCCATCACCATCAACA  750

seq1  ACTTTGTCATTATTGTCATCATCACTATCATTATCCTCACTACCACCATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTCATTATTGTCATCATCACTATCATTATCCTCACTACCACCATC  800

seq1  ACCACCACCACCAGCAGCAGCAGCAGCAGCATA-GCAGCAATATTACAAT  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACCACCACCACCAGCAGCAGCAGCAGCAGCATAGGCAGCAATATTACAAT  850

seq1  GT-GGCACATATTTCTCCTTTTTT-GGTGATTTTATAACAATGTATTTTT  897
      || ||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTGGGCACATATTTCTCCTTTTTTGGGTGATTTTATAACAATGTATTTTT  900

seq1  GTCTTTCATTTTTAAATTCTTTAAAGCAGT-GGTTCTTAACCAGTGACCC  946
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTCTTTCATTTTTAAATTCTTTAAAGCAGTGGGTTCTTAACCAGTGACCC  950

seq1  CATTAGGAATCATATATCAGATATCTACATTATACTTTATA-GCAATAAC  995
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CATTAGGAATCATATATCAGATATCTACATTATACTTTATAGGCAATAAC  1000

seq1  AAAAGTACAGTTATTTTAT-GGTTGAGATCATGGAATATGAGAAACTCTA  1044
      |||||||||| |||||||| ||| |||||||||| |||||||||||||||
seq2  AAAAGTACAGGTATTTTATGGGTGGAGATCATGG-ATATGAGAAACTCTA  1049

seq1  TTAAAGGGTAAAAGGTCATAGCATAAGGGAGTTTT-AGAA-CTACTTTAA  1092
      || |||||| ||||||||||||||||||||||||| |||| |||||| ||
seq2  TT-AAGGGT-AAAGGTCATAGCATAAGGGAGTTTTAAGAACCTACTTAAA  1097

seq1  AGTTTC  1098
       |||||
seq2  GGTTTC  1103