BAC Information

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BAC

Clone NameB6Ng01-251P10
Chromosome15 (Build37)
Map Location 93,307,566 - 93,439,067
singlet/doubletdoublet
Overlap genePphln1, Prickle1
Upstream genePdzrn4, LOC100042552, LOC100043283, Glt8d3, Yaf2, Zcrb1, LOC627623
Downstream geneZfp42-ps1, LOC100042627, LOC100042631, D630010B17Rik, Adamts20, Pus7l, Irak4, Twf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251P10.bB6Ng01-251P10.g
ACCGA059089GA059090
length932434
definitionB6Ng01-251P10.b B6Ng01-251P10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,438,136 - 93,439,067)(93,307,566 - 93,308,005)
sequence
gaattctcagctcctcctgcaccatgcctgcctggatgctgccacactcc
caccttgatgataatggactgaacctctgaacctgaaagccagccccaat
taaatgttgtccttataagagttgccttggtcatggtgtctgctcacaga
agtaaaaccctaaaacataggccatccaaaagcatttgataaatgaatga
acgactaaaggaaaggagttcttagataaagagcacatttgaatttcatg
aactcagacgagcaatgtgccgctgtacctcctgccttggggttttgaca
cccagagctatattgaatacagtcaggactcagtcacgtctccttccctg
ggaaaaacagctccagaacccaaaatctttttacaaaaatactctgagaa
aatagtggagaagcatcaagaattagataaacagtatttatcgccatgca
agtttattacaaaaaaataattaacattaaatgagagaagaaatgtcttc
atcttaagtgaagagcaaatttcatttgtccggtatgatcattttgtgaa
aattcaaaggacagtttttttgtgctttttaaatatttctctaagattct
tatgataagggcccaggaggaggctcacaataggtaaaactgattgctga
acaagccagacatcccaagttcaatccctgaaacataagtaaaaagttgg
atgtgggggtccttcttctgtaattccagcacccctaagaggacatggaa
gatggagatataattagtatatattacagagtccatgcttctgggccagc
tagccaggctcaggcttccaagaaacaagagatgttgcctcaaagtggaa
ggcaagaaccaactcctggaaactgacctccatacgtgtatgtgtgtgtg
tgtctgtgtgtgtgtgagtgtgagtgtgtgtg
caggggaaatgacatctccctactagaataactcagaacccaagaagact
gtacggctccatttctggtagtgagggaccagcagaatggaaggattctg
tttcatcctgacttattcaaattattatagaccccacagttgatgatggt
cagatgggaaaatgaagagcgagaagcagggctagtgtaagtatatttac
tgaaacttgtagaaaacaattagtacatctcccaccatggttatataagc
atgcttgggttggagtttgatttaagaacaatgtgtgatgcacagaatag
cttatggatgaatttggagcacaggcacattgtgatccgttggtattgga
cagattagtttagctatggagatatttgcctcctttttccttagagagcc
ccgattacacctgggtggggtgggggagagtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_93438136_93439067
seq2: B6Ng01-251P10.b_47_978 (reverse)

seq1  CACACACACTCACACTCACACACACACAGACACACACACACATACACGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACTCACACTCACACACACACAGACACACACACACATACACGTA  50

seq1  TGGAGGTCAGTTTCCAGGAGTTGGTTCTTGCCTTCCACTTTGAGGCAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTCAGTTTCCAGGAGTTGGTTCTTGCCTTCCACTTTGAGGCAACA  100

seq1  TCTCTTGTTTCTTGGAAGCCTGAGCCTGGCTAGCTGGCCCAGAAGCATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGTTTCTTGGAAGCCTGAGCCTGGCTAGCTGGCCCAGAAGCATGG  150

seq1  ACTCTGTAATATATACTAATTATATCTCCATCTTCCATGTCCTCTTAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTAATATATACTAATTATATCTCCATCTTCCATGTCCTCTTAGGG  200

seq1  GTGCTGGAATTACAGAAGAAGGACCCCCACATCCAACTTTTTACTTATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGAATTACAGAAGAAGGACCCCCACATCCAACTTTTTACTTATGT  250

seq1  TTCAGGGATTGAACTTGGGATGTCTGGCTTGTTCAGCAATCAGTTTTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGGATTGAACTTGGGATGTCTGGCTTGTTCAGCAATCAGTTTTACC  300

seq1  TATTGTGAGCCTCCTCCTGGGCCCTTATCATAAGAATCTTAGAGAAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGAGCCTCCTCCTGGGCCCTTATCATAAGAATCTTAGAGAAATAT  350

seq1  TTAAAAAGCACAAAAAAACTGTCCTTTGAATTTTCACAAAATGATCATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGCACAAAAAAACTGTCCTTTGAATTTTCACAAAATGATCATAC  400

seq1  CGGACAAATGAAATTTGCTCTTCACTTAAGATGAAGACATTTCTTCTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACAAATGAAATTTGCTCTTCACTTAAGATGAAGACATTTCTTCTCTC  450

seq1  ATTTAATGTTAATTATTTTTTTGTAATAAACTTGCATGGCGATAAATACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATGTTAATTATTTTTTTGTAATAAACTTGCATGGCGATAAATACT  500

seq1  GTTTATCTAATTCTTGATGCTTCTCCACTATTTTCTCAGAGTATTTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATCTAATTCTTGATGCTTCTCCACTATTTTCTCAGAGTATTTTTGT  550

seq1  AAAAAGATTTTGGGTTCTGGAGCTGTTTTTCCCAGGGAAGGAGACGTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATTTTGGGTTCTGGAGCTGTTTTTCCCAGGGAAGGAGACGTGAC  600

seq1  TGAGTCCTGACTGTATTCAATATAGCTCTGGGTGTCAAAACCCCAAGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCCTGACTGTATTCAATATAGCTCTGGGTGTCAAAACCCCAAGGCA  650

seq1  GGAGGTACAGCGGCACATTGCTCGTCTGAGTTCATGAAATTCAAATGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTACAGCGGCACATTGCTCGTCTGAGTTCATGAAATTCAAATGTGC  700

seq1  TCTTTATCTAAGAACTCCTTTCCTTTAGTCGTTCATTCATTTATCAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATCTAAGAACTCCTTTCCTTTAGTCGTTCATTCATTTATCAAATG  750

seq1  CTTTTGGATGGCCTATGTTTTAGGGTTTTACTTCTGTGAGCAGACACCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGATGGCCTATGTTTTAGGGTTTTACTTCTGTGAGCAGACACCAT  800

seq1  GACCAAGGCAACTCTTATAAGGACAACATTTAATTGGGGCTGGCTTTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGGCAACTCTTATAAGGACAACATTTAATTGGGGCTGGCTTTCAG  850

seq1  GTTCAGAGGTTCAGTCCATTATCATCAAGGTGGGAGTGTGGCAGCATCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGAGGTTCAGTCCATTATCATCAAGGTGGGAGTGTGGCAGCATCCA  900

seq1  GGCAGGCATGGTGCAGGAGGAGCTGAGAATTC  932
      ||||||||||||||||||||||||||||||||
seq2  GGCAGGCATGGTGCAGGAGGAGCTGAGAATTC  932

seq1: chr15_93307566_93308005
seq2: B6Ng01-251P10.g_67_506

seq1  GAATTCCAGGGGAAATGACATCTCCCTACTAGAATAACTCAGAACCCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGGAAATGACATCTCCCTACTAGAATAACTCAGAACCCAAG  50

seq1  AAGACTGTACGGCTCCATTTCTGGTAGTGAGGGACCAGCAGAATGGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGTACGGCTCCATTTCTGGTAGTGAGGGACCAGCAGAATGGAAGG  100

seq1  ATTCTGTTTCATCCTGACTTATTCAAATTATTATAGACCCCACAGTTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTTTCATCCTGACTTATTCAAATTATTATAGACCCCACAGTTGAT  150

seq1  GATGGTCAGATGGGAAAATGAAGAGCGAGAAGCAGGGCTAGTGTAAGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTCAGATGGGAAAATGAAGAGCGAGAAGCAGGGCTAGTGTAAGTAT  200

seq1  ATTTACTGAAACTTGTAGAAAACAATTAGTACATCTCCCACCATGGTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTGAAACTTGTAGAAAACAATTAGTACATCTCCCACCATGGTTAT  250

seq1  ATAAGCATGCTTGGGTTGGAGTTTGATTTAAGAACAATGTGTGATGCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCATGCTTGGGTTGGAGTTTGATTTAAGAACAATGTGTGATGCACA  300

seq1  GAATAGCTTATGGATGAATTTGGAGCACAGGCACATTGTGATCCGTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCTTATGGATGAATTTGGAGCACAGGCACATTGTGATCCGTTGGT  350

seq1  ATTGGACAGATTAGTTTAGCTATGGAGATATTTGCCTCCTTTTTCCTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGACAGATTAGTTTAGCTATGGAGATATTTGCCTCCTTTTTCCTTAG  400

seq1  AGAGCCCCGATTACACCTGGGTGGGGTGGGGGAGAGTGGA  440
      ||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCCCGATTACACCTGGGTGGGGTGGGGGAGAGTGGA  440