BAC Information

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BAC

Clone NameB6Ng01-252I07
Chromosome15 (Build37)
Map Location 94,655,900 - 94,828,660
singlet/doubletdoublet
Overlap geneTmem117
Upstream geneD630010B17Rik, Adamts20, Pus7l, Irak4, Twf1
Downstream geneLOC100043315, Nell2, Dbx2, LOC100042684, LOC667849, EG629300, LOC667864, Tmem16f, LOC100043329
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252I07.bB6Ng01-252I07.g
ACCGA059490GA059491
length5251,086
definitionB6Ng01-252I07.b B6Ng01-252I07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,828,130 - 94,828,660)(94,655,900 - 94,656,983)
sequence
agactgagaaaggatagaaaacaaaatactgtaaccatacacaaatgaga
tgcctgcctgtgaattctaatgatgcaaagaacaaattcgtcttgaaaag
aaggtaggtgcaacttaatgctcaacttagacatcacagcacagagcgtt
taagaaggctaacattgtgaaagggattgagtagaacagtagctccagaa
acaggcatcgcttgcaacgggtttcccagtccttcacacagggacaaagc
gccattaactgtcatgtgtttcccctatacacttccttcttgaatctgag
taaaacctatgagctaagataattttcctttaattgtgtcatatatggca
aaaggatttctgtacattaattaagatcattaataccttaatcttgtatt
agccaaaagggggataacatgagttcacctcacccaatcacataggccct
ttaaaaggacagtttatccatctgtagctgcagagtggatacaacgaaac
atgcggggggcggggggtggggggg

gaattcattgtgtgttggccatctactcctgggcatggggtctagcctta
ggtgtggttaatattttcattgagacaccattggagaagattgatttttt
actttgcaattggttatcaactggagagagcttcttgcttaggaatggga
actcatggtctcttcccctctcagcactgggaccccatctggcttgaacc
tgtgcaggccccgtgcatgctgccacagtctctgagttcataaatacatc
agtcctgttatatctggaagatattgttttctaagtgctactcatctcct
ctgtctcttacggtctttctttctcttcagtgtggctccctgagcactga
ggggaaagatttgctgaagacatccctgtcagggccaagtgttccaaggt
ctctcgctctgcacactgtcagtctgcttcaaaggaagcttcgttgatga
tggctgattataaatcataatgtgaggaactttttatatttaaatacttt
atgtgtattcctgtggcctgtgtgagtgtgtacaccatgtaaatgcctgg
tgcctgtgagagtcagcagaaggtgtctatggaagtggacttgtagatgg
ttgtgatggttgtgagccacagtatacaggagctgggaactgaacctggg
ttctctcaaagagcagccagtgctcttaacctctgagccattttgaccac
ctcattttgaggagcttttaaacatttagaacaaccaggcctaccagaaa
aatcttcctagattaagaaaaataaaacacaggttaatttttaatgggcc
tttgagcttcataactgagataaatttcatttaaacaagaagacgctgct
actcacggtgttacagagataaagcagctctgccagggtgcatcctcgca
atggtaatcttcatatatcaatctttatattatcttagagaaaacaaaat
tgtattgttgataaataaggggtctgtgttagattgaaactgaatatgtg
ttagaaaaagagttaacaattttttttccatttttattagtatttagcct
catttacatttccaatgcctaataccaaaagtcccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_94828130_94828660
seq2: B6Ng01-252I07.b_43_573 (reverse)

seq1  CCCCCCCACCCCCCGCCCCCCGCATGTTTCGTTGTATCCACTCTGCAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCACCCCCCGCCCCCCGCATGTTTCGTTGTATCCACTCTGCAGCT  50

seq1  ACAGATGGATAAACTGTCCTTTTAAAGGGCCTATGTGATTGGGTGAGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGGATAAACTGTCCTTTTAAAGGGCCTATGTGATTGGGTGAGGTG  100

seq1  AACTCATGTTATCCCCCTTTTGGCTAATACAAGATTAAGGTATTAATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATGTTATCCCCCTTTTGGCTAATACAAGATTAAGGTATTAATGAT  150

seq1  CTTAATTAATGTACAGAAATCCTTTTGCCATATATGACACAATTAAAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTAATGTACAGAAATCCTTTTGCCATATATGACACAATTAAAGGA  200

seq1  AAATTATCTTAGCTCATAGGTTTTACTCAGATTCAAGAAGGAAGTGTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATCTTAGCTCATAGGTTTTACTCAGATTCAAGAAGGAAGTGTATA  250

seq1  GGGGAAACACATGACAGTTAATGGCGCTTTGTCCCTGTGTGAAGGACTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAACACATGACAGTTAATGGCGCTTTGTCCCTGTGTGAAGGACTGG  300

seq1  GAAACCCGTTGCAAGCGATGCCTGTTTCTGGAGCTACTGTTCTACTCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCGTTGCAAGCGATGCCTGTTTCTGGAGCTACTGTTCTACTCAAT  350

seq1  CCCTTTCACAATGTTAGCCTTCTTAAACGCTCTGTGCTGTGATGTCTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCACAATGTTAGCCTTCTTAAACGCTCTGTGCTGTGATGTCTAAG  400

seq1  TTGAGCATTAAGTTGCACCTACCTTCTTTTCAAGACGAATTTGTTCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCATTAAGTTGCACCTACCTTCTTTTCAAGACGAATTTGTTCTTTG  450

seq1  CATCATTAGAATTCACAGGCAGGCATCTCATTTGTGTATGGTTACAGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTAGAATTCACAGGCAGGCATCTCATTTGTGTATGGTTACAGTAT  500

seq1  TTTGTTTTCTATCCTTTCTCAGTCTGAATTC  531
      |||||||||||||||||||||||||||||||
seq2  TTTGTTTTCTATCCTTTCTCAGTCTGAATTC  531


seq1: chr15_94655900_94656983
seq2: B6Ng01-252I07.g_67_1152

seq1  GAATTCATTGTGTGTTGGCCATCTACTCCTGGGCATGGGGTCTAGCCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTGTGTTGGCCATCTACTCCTGGGCATGGGGTCTAGCCTTA  50

seq1  GGTGTGGTTAATATTTTCATTGAGACACCATTGGAGAAGATTGATTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGTTAATATTTTCATTGAGACACCATTGGAGAAGATTGATTTTTT  100

seq1  ACTTTGCAATTGGTTATCAACTGGAGAGAGCTTCTTGCTTAGGAATGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGCAATTGGTTATCAACTGGAGAGAGCTTCTTGCTTAGGAATGGGA  150

seq1  ACTCATGGTCTCTTCCCCTCTCAGCACTGGGACCCCATCTGGCTTGAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGGTCTCTTCCCCTCTCAGCACTGGGACCCCATCTGGCTTGAACC  200

seq1  TGTGCAGGCCCCGTGCATGCTGCCACAGTCTCTGAGTTCATAAATACATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGGCCCCGTGCATGCTGCCACAGTCTCTGAGTTCATAAATACATC  250

seq1  AGTCCTGTTATATCTGGAAGATATTGTTTTCTAAGTGCTACTCATCTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGTTATATCTGGAAGATATTGTTTTCTAAGTGCTACTCATCTCCT  300

seq1  CTGTCTCTTACGGTCTTTCTTTCTCTTCAGTGTGGCTCCCTGAGCACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTTACGGTCTTTCTTTCTCTTCAGTGTGGCTCCCTGAGCACTGA  350

seq1  GGGGAAAGATTTGCTGAAGACATCCCTGTCAGGGCCAAGTGTTCCAAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAGATTTGCTGAAGACATCCCTGTCAGGGCCAAGTGTTCCAAGGT  400

seq1  CTCTCGCTCTGCACACTGTCAGTCTGCTTCAAAGGAAGCTTCGTTGATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCGCTCTGCACACTGTCAGTCTGCTTCAAAGGAAGCTTCGTTGATGA  450

seq1  TGGCTGATTATAAATCATAATGTGAGGAACTTTTTATATTTAAATACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGATTATAAATCATAATGTGAGGAACTTTTTATATTTAAATACTTT  500

seq1  ATGTGTATTCCTGTGGCCTGTGTGAGTGTGTACACCATGTAAATGCCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATTCCTGTGGCCTGTGTGAGTGTGTACACCATGTAAATGCCTGG  550

seq1  TGCCTGTGAGAGTCAGCAGAAGGTGTCTATGGAAGTGGACTTGTAGATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTGAGAGTCAGCAGAAGGTGTCTATGGAAGTGGACTTGTAGATGG  600

seq1  TTGTGATGGTTGTGAGCCACAGTATACAGGAGCTGGGAACTGAACCTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATGGTTGTGAGCCACAGTATACAGGAGCTGGGAACTGAACCTGGG  650

seq1  TTCTCTCAAAGAGCAGCCAGTGCTCTTAACCTCTGAGCCATTTTGACCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCAAAGAGCAGCCAGTGCTCTTAACCTCTGAGCCATTTTGACCAC  700

seq1  CTCATTTTGAGGAGCTTTTAAACATTTAGAACAACCAGGCCTACCAGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTTGAGGAGCTTTTAAACATTTAGAACAACCAGGCCTACCAGAAA  750

seq1  AATCTTCCTAGATTAAGAAAAATAAAACACAGGTTAATTTTTAATGGGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCCTAGATTAAGAAAAATAAAACACAGGTTAATTTTTAATGGGCC  800

seq1  TTTGAGCTTCATAACTGAGATAAATTTCATTTAAACAAGAAGACGCTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCTTCATAACTGAGATAAATTTCATTTAAACAAGAAGACGCTGCT  850

seq1  ACTCACGGTGTTACAGAGATAAAGCAGCTCTGCCAGGGTGCATCCTCGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACGGTGTTACAGAGATAAAGCAGCTCTGCCAGGGTGCATCCTCGCA  900

seq1  ATGGTAATCTTCATATATCAATCTTTATATTATCTTAGAGAAAACAAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAATCTTCATATATCAATCTTTATATTATCTTAGAGAAAACAAAAT  950

seq1  TGTA-TGTTGATAAATAAGGGGTCTGTGTTAGGATTGAAAACTGAATATG  999
      |||| |||||||||||||||||||||||||| ||||| ||||||||||||
seq2  TGTATTGTTGATAAATAAGGGGTCTGTGTTA-GATTG-AAACTGAATATG  998

seq1  TGTTAGAAAAAGAGTTAACAA-TTTTTTTCCATTTTTATTAGGTATTTAG  1048
      ||||||||||||||||||||| ||||||||||||||||||| ||||||||
seq2  TGTTAGAAAAAGAGTTAACAATTTTTTTTCCATTTTTATTA-GTATTTAG  1047

seq1  -CTCATTTACATTTCCAATGC--TATACCAAAAGTCCCC  1084
       ||||||||||||||||||||   |||||||||||||||
seq2  CCTCATTTACATTTCCAATGCCTAATACCAAAAGTCCCC  1086


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