BAC Information

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BAC

Clone NameB6Ng01-253H19
Chromosome15 (Build37)
Map Location 19,193,480 - 19,194,571
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666839, Cdh10, EG666857
Downstream geneEG666875, LOC621884, LOC100040265
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253H19.bB6Ng01-253H19.g
ACCGA060204GA060205
length1,1961,084
definitionB6Ng01-253H19.b B6Ng01-253H19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagaccaaaaattcagatgacagc
agatgctggtgaggatgtggagaaaggggaacactcctccatgttggtgg
gattgcaagcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaattggacatagtactaccggaggatcccgcaatacctctcttgggca
tatatccagaagatgtcccaaccggtaagaaggacacatgctccactatg
ttcacagcagccttgtttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
aatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaat
ggatggacctggagggtatcatcctgagtgaggtacccaatcacaaagga
actcgcacaatatgtactcactgataatggatattagccacaaacttagg
atacccaagatataagatacaacttgccaaacacatgaaattcaagaaga
aagaagaccaaagtgtggacactttaccctttcttataaatgggaacaaa
atacccatggaaggagttacagagacaaaatttggagctgtgaggaaagg
atggaccatctagtgattgccatatgcagggatccatcccataatcagct
tccaaatgctgacaccattgcatacactagcaagattttgctgaaaggac
ccagatatatctgtctcttgtgagactatgccgggtcctagcaaacacag
aagtggatgatcacagtcagctattggatgggtcacacggcccccaatgg
aggagctagagaaattacccaaggagctaaggaactgcaaccctatagtg
gacaacaatatgaactaaccagtacctggagctcttgtctttagctgcat
atgtatcaaagaatagcctagtcgccatcactgcaagagagaccattgac
gtgccaactttatatgcccagtacagggaattgcaggctaaaagggggat
tgatgagtatggggaatgcggggtcttctcatcgcgcgattcatcg
gaattcactctgaagagcaggctggcttcgaactcagaaatttgcctgcc
tctgcctcccaagtgctgggattaaaggtgtgcgccaccaccacccggcc
tgaatttcttaatttggaatactgtggagagcattctctacaaccctgga
atgtgcccgtgttcaccttctcttttagagcctatctttgaattgaaaga
ctccgagaggagtccctcgctcaggcctcaggacaatagcggacacccaa
gaactcacgacagaccgagcttgttgcaaaccacatgaggctttattggg
gaaagccagagctctggggacgactcatatcccacgcaggggtagaggag
tcgtcctcgaggggaaagagttcccagtttttataggccctcagggggga
aaggagaagggggagattaggcgatttccagatctaaacaatgtctattc
tcaagaaatgggtatgggaggggtacaaggaaagagtctaatgaaggtgc
agcaatgggcacacacctggtcagaacattggcagacacacaggttcaag
gagtggccagagcattgtgcacctctatttttctaaatcagtgaagctag
ttctgctaacactgacgtctatcttgccaatatcagggcttctgtgtcct
tttacattctgccaggatctttcagaataacatcatgtggagatgagctc
cagtgtgcaaatttctatagaaatacaattattcaaatcttagaaaaagg
cctatgatgctaatttcatcaaaaggtcctgaaaacatctataaaaatgc
tttgagcaaataactaaacaaaaactggaaaaaaatagataaataaagac
agaagtgagactacaaagctgaaaagacacatgtttttacctgatacatc
tcctaagatgtgtgtgtatgtgtgtacagacataaaataatagatgatag
aggaagtattgcatgcatgcatagatgctgtttatacatacatgagtgga
tatatatatatatataatcattatatatatatatattaataatgtaatca
cataacggattacttccgtaggtatacgcttgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_19193480_19194571
seq2: B6Ng01-253H19.g_64_1147 (reverse)

seq1  TGCAAGCGTATACCTAAGTGAAGTTATTCCCTTTAATGTGATTTTACATT  50
      |||||||||||||||| | ||||| ||  || || ||||||  |||||||
seq2  TGCAAGCGTATACCTACG-GAAGTAAT--CCGTT-ATGTGA--TTACATT  44

seq1  ATATATATATATATATATATATGTATATATATATATATATATCCACTCAT  100
      ||  ||||||||||||||| |||  |||||||||||||||||||||||||
seq2  ATTAATATATATATATATA-ATGATTATATATATATATATATCCACTCAT  93

seq1  GTATGTATAAAACAGCATCTATGCATGCATGCAATACTTCCTCTATCATC  150
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTAT-AAACAGCATCTATGCATGCATGCAATACTTCCTCTATCATC  142

seq1  TATTATTTTATGTCTGTACACACATACACACACATCTTAGGAGATGTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTTATGTCTGTACACACATACACACACATCTTAGGAGATGTATC  192

seq1  AGGTAAAAACATGTGTCTTTTCAGCTTTGTAGTCTCACTTCTGTCTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAAACATGTGTCTTTTCAGCTTTGTAGTCTCACTTCTGTCTTTAT  242

seq1  TTATCTATTTTTTTCCAGTTTTTGTTTAGTTATTTGCTCAAAGCATTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTATTTTTTTCCAGTTTTTGTTTAGTTATTTGCTCAAAGCATTTTT  292

seq1  ATAGATGTTTTCAGGACCTTTTGATGAAATTAGCATCATAGGCCTTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGTTTTCAGGACCTTTTGATGAAATTAGCATCATAGGCCTTTTTC  342

seq1  TAAGATTTGAATAATTGTATTTCTATAGAAATTTGCACACTGGAGCTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTTGAATAATTGTATTTCTATAGAAATTTGCACACTGGAGCTCAT  392

seq1  CTCCACATGATGTTATTCTGAAAGATCCTGGCAGAATGTAAAAGGACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACATGATGTTATTCTGAAAGATCCTGGCAGAATGTAAAAGGACACA  442

seq1  GAAGCCCTGATATTGGCAAGATAGACGTCAGTGTTAGCAGAACTAGCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCCTGATATTGGCAAGATAGACGTCAGTGTTAGCAGAACTAGCTTC  492

seq1  ACTGATTTAGAAAAATAGAGGTGCACAATGCTCTGGCCACTCCTTGAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATTTAGAAAAATAGAGGTGCACAATGCTCTGGCCACTCCTTGAACC  542

seq1  TGTGTGTCTGCCAATGTTCTGACCAGGTGTGTGCCCATTGCTGCACCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTCTGCCAATGTTCTGACCAGGTGTGTGCCCATTGCTGCACCTTC  592

seq1  ATTAGACTCTTTCCTTGTACCCCTCCCATACCCATTTCTTGAGAATAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGACTCTTTCCTTGTACCCCTCCCATACCCATTTCTTGAGAATAGAC  642

seq1  ATTGTTTAGATCTGGAAATCGCCTAATCTCCCCCTTCTCCTTTCCCCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTAGATCTGGAAATCGCCTAATCTCCCCCTTCTCCTTTCCCCCCT  692

seq1  GAGGGCCTATAAAAACTGGGAACTCTTTCCCCTCGAGGACGACTCCTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCCTATAAAAACTGGGAACTCTTTCCCCTCGAGGACGACTCCTCTA  742

seq1  CCCCTGCGTGGGATATGAGTCGTCCCCAGAGCTCTGGCTTTCCCCAATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCGTGGGATATGAGTCGTCCCCAGAGCTCTGGCTTTCCCCAATAA  792

seq1  AGCCTCATGTGGTTTGCAACAAGCTCGGTCTGTCGTGAGTTCTTGGGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCATGTGGTTTGCAACAAGCTCGGTCTGTCGTGAGTTCTTGGGTGT  842

seq1  CCGCTATTGTCCTGAGGCCTGAGCGAGGGACTCCTCTCGGAGTCTTTCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTATTGTCCTGAGGCCTGAGCGAGGGACTCCTCTCGGAGTCTTTCAA  892

seq1  TTCAAAGATAGGCTCTAAAAGAGAAGGTGAACACGGGCACATTCCAGGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGATAGGCTCTAAAAGAGAAGGTGAACACGGGCACATTCCAGGGT  942

seq1  TGTAGAGAATGCTCTCCACAGTATTCCAAATTAAGAAATTCAGGCCGGGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGAATGCTCTCCACAGTATTCCAAATTAAGAAATTCAGGCCGGGT  992

seq1  GGTGGTGGCGCACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGGCGCACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCA  1042

seq1  AATTTCTGAGTTCGAAGCCAGCCTGCTCTTCAGAGTGAATTC  1092
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTGAGTTCGAAGCCAGCCTGCTCTTCAGAGTGAATTC  1084