BAC Information

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BAC

Clone NameB6Ng01-253P05
Chromosome15 (Build37)
Map Location 61,244,475 - 61,245,635
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC623094, EG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg, LOC100040323
Downstream geneMyc, Pvt1, LOC100040584, H2afy3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253P05.bB6Ng01-253P05.g
ACCGA060545GA060546
length1,1371,165
definitionB6Ng01-253P05.b B6Ng01-253P05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
tcaaatgctttctcagcatctaacgagatgatcatgtggttcgagatgat
catgtggtttttgtctttgagtttgcttatattctggattacattgatgg
atttccatatattgaaccatccctgcatccctggaatgaaacctacttgg
tcaggatggatgattgttttgatgtgttcttggattccggtagcaagaac
tttattgaggatttttgcatcgattttcataagggaaattggtctgaagt
tctctatctttgttgggtctttttgtggtttaggtatcagagtaattgtg
gcttcatagaatgagttgagtagagtaccttctacttctattttgtggaa
tattttgtgaagaacctggattagatctcttttgaaggtctgatagaact
ctgcactaaacccatctggtcctgggcgtttttttggttgggagactatt
aatgactgcttctatttctttaggggatatagaactgtttagatcattaa
tctgatcttgatttaactttggtacctggtatatgtctagaaacttgtcc
atttcatccaggttctccagttttgttgagtatagccttttgtagaagga
tctgatggtgtttggatttcttcaggatctgttgttatgtctcccttttc
atttctgattttgttaattagaatgctttccttgtgccctctagtgagtc
tggctaaagggtttgtctatcttgttgattttctcaaaggaccagctcct
cgtttggttgattctttgaatagtcttcttgtttccacttggttgatttc
gcccctgagtttgattatttcctgccctctactcctcttgcatgaatttg
cttccttttgtctagagcttttaggtatgttgtcagctgctaatgtgtgc
tctctctagtttctttttggagcactcagagctatgagtttctcttagaa
tgctttcatgttccataagttggtatgtgtgctcattttcattactccaa
aagtcttaattcatttcttatcctcctgaccagtatcatttgaggaaggt
gtggtcatttccaatgaaaggttgctttcataatatg
gaattcttaccaacatttttgttagtgactgcctatgaatgcacatcact
ttcctcagccactaattagctttaactgtcatttgtacgcagtgtcaaat
ttcctgagaaaggggtctcacttgagaaattactcaaaaaagattaacct
gtgagcatttctttgagggattgtcatgcttgttaattaatgtaggagga
cccagcccactatggacagcaatattccctaggcagatggacttgtgatg
aaagctagctaagaaggaacctgtgagttagcaagcagcattcgttcatg
gtgtctgctttatgtgtctgcttgaattcttgtcctgacatccttcaatg
atgaaccataatgtgtaagttttaatgcttcctttctttccccagactga
ttttgatcagaatgtttgatcagatcaacagaaaggaaacgacagaaaaa
aatcgtgagaggaacatgaaggtaacacactcatggagcaaagatgagaa
acttcagaaaacttcagcatcctgcacaaacggaagtagaaaattattct
caggtgatgatactcttattgataaataacattttccatttaaactttaa
tctagcattaacatagtcatcagataataaatatttgtatttttaatttc
acgattttgaaaaagatactaagcattctggaacaaactaaaaatcaaga
ttaaattcattagaactcatattatatacattcctgtctttgtaactttc
attttgtatgtgtaaattactcagtgaaactcacacatacataagcagag
atgatgcatccatagcagagatgactcaaatattagatttgctttctgag
tccattatgagatgataagaaattcttgaaggatagaattgttgggagat
agaaggaaaagaacttgggaatagaactttcttggaatagacactacttc
tagttctgaagtcttagatccttccaatatgtctatgaaacccagagact
atgatgttctcatcttagggattttgtgttttgtatttcaatgacctcta
cagtttttatgctctatgaagaattctccttgccgtacatgtacctgatg
gactgccagacctgagtccattataatggccatcacattggaaccgtgtg
ggagagaccattatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_61244475_61245635
seq2: B6Ng01-253P05.g_63_1227 (reverse)

seq1  AATAATGGTCTC-----CA-TGTTCAAATGTGATGG-CATAATAATGAAC  43
      ||||||||||||     ||  |||| |||||||||| ||| |||||| ||
seq2  AATAATGGTCTCTCCCACACGGTTCCAATGTGATGGCCATTATAATGGAC  50

seq1  TCAGTTCT-GCAGTCCATCCAGTACATGTTAAGGGCAA-GAGAATTCTTC  91
      |||| ||| ||||||||||  ||||||||  | ||||| |||||||||||
seq2  TCAGGTCTGGCAGTCCATCAGGTACATGT--ACGGCAAGGAGAATTCTTC  98

seq1  ATAGAGCATAAAAACTGTAGAGGTCATTTGAAATAC-AAACACAAAATCC  140
      |||||||||||||||||||||||||| ||||||||| |||||||||||||
seq2  ATAGAGCATAAAAACTGTAGAGGTCA-TTGAAATACAAAACACAAAATCC  147

seq1  TAAAGATGAGAAACAATCATAGTCCTCTGGGTTTTCATAGACATATTGGA  190
        ||||||||||   |||||||| ||||||| ||||||||||||||||||
seq2  CTAAGATGAGAA--CATCATAGT-CTCTGGG-TTTCATAGACATATTGGA  193

seq1  AGGATCTAAGACTTCAGAACTAGAAGTAGTGTCTTATTCCAAGAAAGTTC  240
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGGATCTAAGACTTCAGAACTAGAAGTAGTGTC-TATTCCAAGAAAGTTC  242

seq1  TATT-CCAAGTTCTTTTCCTTCTATCT-CCAACAATTCTATCCTTCAAGA  288
      |||| |||||||||||||||||||||| ||||||||||||||||||||||
seq2  TATTCCCAAGTTCTTTTCCTTCTATCTCCCAACAATTCTATCCTTCAAGA  292

seq1  ATTTCTTATCATCTCATAATGGACTCAGAAAGCAAATCTAATATTTGAGT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTATCATCTCATAATGGACTCAGAAAGCAAATCTAATATTTGAGT  342

seq1  CATCTCTGCTATGGATGCATCATCTCTGCTTATGTATGTGTGAGTTTCAC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGCTATGGATGCATCATCTCTGCTTATGTATGTGTGAGTTTCAC  392

seq1  TGAGTAATTTACACATACAAAATGAAAGTTACAAAGACAGGAATGTATAT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAATTTACACATACAAAATGAAAGTTACAAAGACAGGAATGTATAT  442

seq1  AATATGAGTTCTAATGAATTTAATCTTGATTTTTAGTTTGTTCCAGAATG  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAGTTCTAATGAATTTAATCTTGATTTTTAGTTTGTTCCAGAATG  492

seq1  CTTAGTATCTTTTTCAAAATCGTGAAATTAAAAATACAAATATTTATTAT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTATCTTTTTCAAAATCGTGAAATTAAAAATACAAATATTTATTAT  542

seq1  CTGATGACTATGTTAATGCTAGATTAAAGTTTAAATGGAAAATGTTATTT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGACTATGTTAATGCTAGATTAAAGTTTAAATGGAAAATGTTATTT  592

seq1  ATCAATAAGAGTATCATCACCTGAGAATAATTTTCTACTTCCGTTTGTGC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAAGAGTATCATCACCTGAGAATAATTTTCTACTTCCGTTTGTGC  642

seq1  AGGATGCTGAAGTTTTCTGAAGTTTCTCATCTTTGCTCCATGAGTGTGTT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCTGAAGTTTTCTGAAGTTTCTCATCTTTGCTCCATGAGTGTGTT  692

seq1  ACCTTCATGTTCCTCTCACGATTTTTTTCTGTCGTTTCCTTTCTGTTGAT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCATGTTCCTCTCACGATTTTTTTCTGTCGTTTCCTTTCTGTTGAT  742

seq1  CTGATCAAACATTCTGATCAAAATCAGTCTGGGGAAAGAAAGGAAGCATT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCAAACATTCTGATCAAAATCAGTCTGGGGAAAGAAAGGAAGCATT  792

seq1  AAAACTTACACATTATGGTTCATCATTGAAGGATGTCAGGACAAGAATTC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTACACATTATGGTTCATCATTGAAGGATGTCAGGACAAGAATTC  842

seq1  AAGCAGACACATAAAGCAGACACCATGAACGAATGCTGCTTGCTAACTCA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGACACATAAAGCAGACACCATGAACGAATGCTGCTTGCTAACTCA  892

seq1  CAGGTTCCTTCTTAGCTAGCTTTCATCACAAGTCCATCTGCCTAGGGAAT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCCTTCTTAGCTAGCTTTCATCACAAGTCCATCTGCCTAGGGAAT  942

seq1  ATTGCTGTCCATAGTGGGCTGGGTCCTCCTACATTAATTAACAAGCATGA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGTCCATAGTGGGCTGGGTCCTCCTACATTAATTAACAAGCATGA  992

seq1  CAATCCCTCAAAGAAATGCTCACAGGTTAATCTTTTTTGAGTAATTTCTC  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCCTCAAAGAAATGCTCACAGGTTAATCTTTTTTGAGTAATTTCTC  1042

seq1  AAGTGAGACCCCTTTCTCAGGAAATTTGACACTGCGTACAAATGACAGTT  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGACCCCTTTCTCAGGAAATTTGACACTGCGTACAAATGACAGTT  1092

seq1  AAAGCTAATTAGTGGCTGAGGAAAGTGATGTGCATTCATAGGCAGTCACT  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAATTAGTGGCTGAGGAAAGTGATGTGCATTCATAGGCAGTCACT  1142

seq1  AACAAAAATGTTGGTAAGAATTC  1161
      |||||||||||||||||||||||
seq2  AACAAAAATGTTGGTAAGAATTC  1165