BAC Information

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BAC

Clone NameB6Ng01-254I23
Chromosome15 (Build37)
Map Location 4,773,560 - 4,957,684
singlet/doubletdoublet
Overlap geneLOC100039214, 4930455B06Rik, C7
Upstream geneFbxo4, AW549877, LOC100039196, Oxct1, Plcxd3, C6
Downstream geneCard6, Rpl37, LOC100039281, Prkaa1, Ttc33, Ptger4, LOC100039322, LOC100039308, LOC666291, LOC666319, LOC100039358
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254I23.bB6Ng01-254I23.g
ACCGA060994GA060995
length1,183323
definitionB6Ng01-254I23.b B6Ng01-254I23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,773,560 - 4,774,755)(4,957,362 - 4,957,684)
sequence
gaattcaaaccctctttttactggttctctgcatatgtgatttgggaggt
tgtcaaagcccacataaccctcaagattcttcatttgagctaccatgaca
ctgcagtggtcagtcatgtgcccacacttacttacatgcaaagatacctt
aattcaggattaattgtattcttagtatcacaggctttattcttaaaatg
actatgtaagtcacatgtgacaagttatatttatattcagaggctgtcaa
ataataatataataataataataataataataatagtagtagtagtagta
gtagtagtaatagtaataataaactgaagtttttgcttattcacagaaga
tcttgtgcttgctgccctgggtggtatggtagaaactcaatgacactgag
gattctataccaggggaaaccaaagacacatggagaaggtacatgctctg
acataaaggccagacccagccctgatcttagtccagacatcaactatttg
aaggaagaagaccacaaatattaatgaagtccaggtatttgaaacacctg
atgttggtgtctttttctaggtagcctgaagcagaagcagctcacttcag
tgtcttcattccaaattcctaattcacagagcccacaagaggtacagagt
aacttgttttataccagtgagtttaaattggcctgctgtatagcaataga
cagacaatcaaaaatagttctgtaaggactattttttgtttttaagactc
atataatgcagtcaacataggtaagtaaagggaatagaatgtcaatctca
tgctggagtagttcagaaggaagaaaaatatatattatattagttatata
ttaataaataaaatacaaaaggtataaatgagtttctacacacacacaca
aagacaggcagcagcagcatgcagcaagcagcagcaggcagacaggcaga
cagcagacagcagacagcagacagagaactggtaagtgaatcatcctaca
tggaactatttgaattactttggaaatatttttgcagttagaaagtacct
aatagtaagttaaaaagaagaacccatgaagttttcatcataacctgact
aggatgcatattctgtgaaaattaaaccaaccctgacaagttcaatttct
gttaagccacaacgatagaactgcctagttcta
tgcctatcaccccctgccttaaaagatggatttgttcaagttggttatga
aaagatatatttttccttcatgaatattccaacttctatctctttacttg
gacataacctatatctttctccatggtcaaatagtactaatatattttat
atgtgcatttttacttcactagcagaggggatttcattcatcctttggct
caagatttttctttctttttcttcttcttcttcttcttcttcttcttctt
cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcc
tcctcctcctcctcctcctcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_4773560_4774755
seq2: B6Ng01-254I23.b_47_1229

seq1  GAATTCAAACCCTCTTTTTACTGGTTCTCTGCATATGTGATTTGGGAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACCCTCTTTTTACTGGTTCTCTGCATATGTGATTTGGGAGGT  50

seq1  TGTCAAAGCCCACATAACCCTCAAGATTCTTCATTTGAGCTACCATGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAGCCCACATAACCCTCAAGATTCTTCATTTGAGCTACCATGACA  100

seq1  CTGCAGTGGTCAGTCATGTGCCCACACTTACTTACATGCAAAGATACCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTGGTCAGTCATGTGCCCACACTTACTTACATGCAAAGATACCTT  150

seq1  AATTCAGGATTAATTGTATTCTTAGTATCACAGGCTTTATTCTTAAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGGATTAATTGTATTCTTAGTATCACAGGCTTTATTCTTAAAATG  200

seq1  ACTATGTAAGTCACATGTGACAAGTTATATTTATATTCAGAGGCTGTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTAAGTCACATGTGACAAGTTATATTTATATTCAGAGGCTGTCAA  250

seq1  ATAATAATATAATAATAATAATAATAATAATAATAGTAGTAGTAGTAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATATAATAATAATAATAATAATAATAATAGTAGTAGTAGTAGTA  300

seq1  GTAGTAGTAATAGTAATAATAAACTGAAGTTTTTGCTTATTCACAGAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAGTAATAGTAATAATAAACTGAAGTTTTTGCTTATTCACAGAAGA  350

seq1  TCTTGTGCTTGCTGCCCTGGGTGGTATGGTAGAAACTCAATGACACTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGCTTGCTGCCCTGGGTGGTATGGTAGAAACTCAATGACACTGAG  400

seq1  GATTCTATACCAGGGGAAACCAAAGACACATGGAGAAGGTACATGCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTATACCAGGGGAAACCAAAGACACATGGAGAAGGTACATGCTCTG  450

seq1  ACATAAAGGCCAGACCCAGCCCTGATCTTAGTCCAGACATCAACTATTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAGGCCAGACCCAGCCCTGATCTTAGTCCAGACATCAACTATTTG  500

seq1  AAGGAAGAAGACCACAAATATTAATGAAGTCCAGGTATTTGAAACACCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGAAGACCACAAATATTAATGAAGTCCAGGTATTTGAAACACCTG  550

seq1  ATGTTGGTGTCTTTTTCTAGGTAGCCTGAAGCAGAAGCAGCTCACTTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGTGTCTTTTTCTAGGTAGCCTGAAGCAGAAGCAGCTCACTTCAG  600

seq1  TGTCTTCATTCCAAATTCCTAATTCACAGAGCCCACAAGAGGTACAGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCATTCCAAATTCCTAATTCACAGAGCCCACAAGAGGTACAGAGT  650

seq1  AACTTGTTTTATACCAGTGAGTTTAAATTGGCCTGCTGTATAGCAATAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTTTTATACCAGTGAGTTTAAATTGGCCTGCTGTATAGCAATAGA  700

seq1  CAGACAATCAAAAATAGTTCTGTAAGGACTATTTTTTGTTTTTAAGACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAATCAAAAATAGTTCTGTAAGGACTATTTTTTGTTTTTAAGACTC  750

seq1  ATATAATGCAGTCAACATAGGTAAGTAAAGGGAATAGAATGTCAATCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATGCAGTCAACATAGGTAAGTAAAGGGAATAGAATGTCAATCTCA  800

seq1  TGCTGGAGTAGTTCAGAAGGAAGAAAAATATATATTATATTAGTTATATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAGTAGTTCAGAAGGAAGAAAAATATATATTATATTAGTTATATA  850

seq1  TTAATAAATAAAATACAAAAGGTATAAATGAGTTTCTACACACACACACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAATAAAATACAAAAGGTATAAATGAGTTTCTACACACACACACA  900

seq1  AAGACAGGCAGGCAGGCAGGCAGGCAGGCAAGCAGGCAGGCAGGCAGACA  950
      |||||||||| ||| ||| ||| ||| ||||||| ||| |||||||||||
seq2  AAGACAGGCA-GCA-GCA-GCATGCA-GCAAGCA-GCA-GCAGGCAGACA  944

seq1  GGCAGACAGGCAGACAGGCAGACAGGCAGACAGAGAACTGGTAAGTGAAT  1000
      |||||||| ||||||| ||||||| |||||||||||||||||||||||||
seq2  GGCAGACA-GCAGACA-GCAGACA-GCAGACAGAGAACTGGTAAGTGAAT  991

seq1  CAATCCTACATGGACCTATTTGAATTACTTTGGAAATATTTTTGCAAGTT  1050
      | |||||||||||| |||||||||||||||||||||||||||||| ||||
seq2  C-ATCCTACATGGAACTATTTGAATTACTTTGGAAATATTTTTGC-AGTT  1039

seq1  AGAAAGTACCTAATAGTAAGTTAAAAAAGAGAACCCATG-AGTTTTCAAT  1099
      |||||||||||||||||||||||||||  |||||||||| ||||||| ||
seq2  AGAAAGTACCTAATAGTAAGTTAAAAAGAAGAACCCATGAAGTTTTC-AT  1088

seq1  CATAACATGACTAGGATGCATA-TCTGTGAAAAATTATAACAA-CCTGAA  1147
      |||||| ||||||||||||||| |||||| ||||||| | ||| ||||| 
seq2  CATAACCTGACTAGGATGCATATTCTGTG-AAAATTAAACCAACCCTGA-  1136

seq1  CCAATGTCCAATTTCTGTTAAGCCAGACGGTATAG-ACTGCCTAGTTCTA  1196
       ||| || ||||||||||||||||| |  | |||| ||||||||||||||
seq2  -CAA-GTTCAATTTCTGTTAAGCCACAACG-ATAGAACTGCCTAGTTCTA  1183

seq1: chr15_4957362_4957684
seq2: B6Ng01-254I23.g_76_398 (reverse)

seq1  GAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGA  50

seq1  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG  100

seq1  AAGAAAAAGAAAGAAAAATCTTGAGCCAAAGGATGAATGAAATCCCCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAGAAAGAAAAATCTTGAGCCAAAGGATGAATGAAATCCCCTCT  150

seq1  GCTAGTGAAGTAAAAATGCACATATAAAATATATTAGTACTATTTGACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTGAAGTAAAAATGCACATATAAAATATATTAGTACTATTTGACCA  200

seq1  TGGAGAAAGATATAGGTTATGTCCAAGTAAAGAGATAGAAGTTGGAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAAGATATAGGTTATGTCCAAGTAAAGAGATAGAAGTTGGAATAT  250

seq1  TCATGAAGGAAAAATATATCTTTTCATAACCAACTTGAACAAATCCATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAAGGAAAAATATATCTTTTCATAACCAACTTGAACAAATCCATCT  300

seq1  TTTAAGGCAGGGGGTGATAGGCA  323
      |||||||||||||||||||||||
seq2  TTTAAGGCAGGGGGTGATAGGCA  323