BAC Information

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BAC

Clone NameB6Ng01-255F10
Chromosome15 (Build37)
Map Location 75,119,243 - 75,120,269
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040984, Bai1, 1700016M24Rik, Arc, Jrk, 4933427E11Rik, Psca, 4930572J05Rik, Slurp1, Lypd2, 2300005B03Rik, Lynx1, Ly6d, D730001G18Rik, Ly6k, Gml, Hemt1, Cyp11b1, Cyp11b2, 2010109I03Rik, LOC625653, Ly6e, Ly6i, LOC666240, LOC100041528, Ly6a, Ly6c, LOC546642, EG625737, LOC100041546, I830127L07Rik, LOC100041070, LOC546644, LOC100041087, BC025446, LOC100041092, Ly6f
Downstream geneLOC100041652, LOC100041107, 9030619P08Rik, Ly6h, Gpihbp1, Zfp41, 2810039B14Rik, Top1mt, Rhpn1, Mafa, Zc3h3, LOC672572, Gsdmdc1, Naprt1, Eef1d, Tigd5, Pycrl, Tsta3, Zfp623, Eif2s3x-ps1, Zfp707, 2410075B13Rik, Mapk15, AA409316, K230010J24Rik, Scrib, 2410104I19Rik, Nrbp2, Eppk1, BC024139, Plec1, LOC671535, Grina, Spatc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255F10.bB6Ng01-255F10.g
ACCGA061568GA061569
length1,0701,034
definitionB6Ng01-255F10.b B6Ng01-255F10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaatagacccatgaaatattgtgcttctttcttggtggtgggag
ggaccaggtgcaataaattatctttcacctcagaaagaatatctctgcat
gttccacatcactggactcctgagaatttcactgaggtagatgacccttg
aattttggttggatttatttcccatcctctgatatgcatatgtgttacca
gtgagtccaaagtggttgctcctgctctttcacttggtccaatcagcata
atgtcatcaatatagtgcaccaaagtgatattttgtagaggagacaaagg
gtcaagatctcttcttactaagttatgatacagggcaggaaagttactat
atccttgaggctaaactgtaaaggtctaactgctggccttgccaactgaa
agctaattgcttctggtggtccttagggacaggttctgagaagaaggcat
ttgctagatcaatagctgtatatcaggtaccaggagttgtgttaatttgc
tcaagtaataaaactacatctggtacagtagattcaattgcagtcaatac
ctgatttagttttcccattctccataatccacctgtctaatgctctggcc
agataagagagatatggtgggaacatctttcaagtccttgataatggcac
taatttctgcaatttttccaggaatatgatattggttttgattcactatt
ttcttaggcagaggcaactctaaagacatccatttagtccttccaaccgt
aatagccctcactccacaggtcagggaaccaatgtgagaattctgtcaat
ttctaagtatatccattccatttatgcttcctggaagtggggaagtgacc
acaagatatattctcagacctactatgagttggtcagcagtcaaaactcc
attaatcacctgcctttcattagctcctaatttaagtgggagggcaaccc
tatcatcctccttgtcgtcctctcgtcgtcctcctcgtcatccttgtctc
tcatcgtctcatctctcgtcgtctctcgtctctcctcctcgtcgatggtc
ctcctcctcctccctcgacg
gaattcccaggtccccagaaagcccaggtttcccagtaaagtttcatagg
aatgaaagagctgattgcctttgtcatttcttaaatctggaatcctgagg
caaaaagtaaagacagtgaaacactcacatcctcaagctcatggccaccc
ccaggctccctgaatccaatggagaggaaccctcagctgacttgtagcct
ccagccagctgtataagctgggaatatgggaatgttgtacactcaactaa
ttactgttccctaagaggcttgagtgtgtgtttgagagatggcagcactc
actacaggtgtgtgcacccctggacaagtcctttgtattgtactgggttc
caatcagcagcatgcctgaacaatgggtgttgcaggccgaccagcagctc
gagaggaacggtacaactgagatggcagctcgagctgaaagagaggagct
agacggacagaagaaagaacggagccaagtcaaagtggactctgattaaa
gctcaattttactattccaacacgcagttatgaaggaggggaaggggggc
cgattcccaccaaataatcctggagtccagtagcagggtgactacatgta
tggctctggaacagcaaagcggcaggttccagcagtgggcgtggcagagc
gattgagcagcaagctccatcccgatgtaaacagtggaacctttaaggct
gggggaggggaggctacaaatggagagccaactctcccttgccattagtg
ttggtcaccatctaggggttcacatggattccaaaactattgtaaagttt
tggagtttgtgtttgcatttgcaagtgtgagcaagtgtgtgtgtttgtgt
gtgtgcatgtatgtcctagatttacacatctttgtatgaaaaatcctgtg
gagagtatcctgtctctcagagtttggatttccgtgcgatgtctgcttaa
cataaggcattgggatccaaaagtctgttcttcatatggtgcgaaattgg
gtctaatgtcacaatttatgtaaattcgggttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_75119243_75120269
seq2: B6Ng01-255F10.g_65_1098 (reverse)

seq1  GGAACCC-AATTTACATAATTTGTG-CATTAGA-CCAAATTCACACCATA  47
      ||||||| ||||||||||| ||||| ||||||| |||| ||| |||||||
seq2  GGAACCCGAATTTACATAAATTGTGACATTAGACCCAATTTCGCACCATA  50

seq1  TGAGGAACAGAC-TTTGGATCCCAATGCC-TATG-TAAGCAGGACATCGC  94
      ||| |||||||| |||||||||||||||| |||| |||||| ||||||||
seq2  TGAAGAACAGACTTTTGGATCCCAATGCCTTATGTTAAGCA-GACATCGC  99

seq1  ACTGTAAATCC-AACTCTGAGTGACAGGATACTCTCCACAGGCTTTTTCA  143
      || | |||||| ||||||||| |||||||||||||||||||| |||||||
seq2  AC-GGAAATCCAAACTCTGAGAGACAGGATACTCTCCACAGGATTTTTCA  148

seq1  TACAAAGATGTGTAAATCTA-GACATACATGCACACACACAAACACACAC  192
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TACAAAGATGTGTAAATCTAGGACATACATGCACACACACAAACACACAC  198

seq1  ACTTGCTCACACTTGCAAATGCAAACACAAACTCCAAAACTTTACAATAG  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTCACACTTGCAAATGCAAACACAAACTCCAAAACTTTACAATAG  248

seq1  -TTTGGAATCCATGTGAACCCCTAGATGGTGACCAACACTAATGGCAAGG  291
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAATCCATGTGAACCCCTAGATGGTGACCAACACTAATGGCAAGG  298

seq1  GAGAGTTGGCTCTCCATTTGTAGCCTCCCCTCCCCCAGCCTTAAAGGTTC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTGGCTCTCCATTTGTAGCCTCCCCTCCCCCAGCCTTAAAGGTTC  348

seq1  CACTGTTTACATCGGGATGGAGCTTGCTGCTCAATCGCTCTGCCACGCCC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTTTACATCGGGATGGAGCTTGCTGCTCAATCGCTCTGCCACGCCC  398

seq1  ACTGCTGGAACCTGCCGCTTTGCTGTTCCAGAGCCATACATGTAGTCACC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGGAACCTGCCGCTTTGCTGTTCCAGAGCCATACATGTAGTCACC  448

seq1  CTGCTACTGGACTCCAGGATTATTTGGTGGGAATCGGCCCCCCTTCCCCT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTACTGGACTCCAGGATTATTTGGTGGGAATCGGCCCCCCTTCCCCT  498

seq1  CCTTCATAACTGCGTGTTGGAATAGTAAAATTGAGCTTTAATCAGAGTCC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATAACTGCGTGTTGGAATAGTAAAATTGAGCTTTAATCAGAGTCC  548

seq1  ACTTTGACTTGGCTCCGTTCTTTCTTCTGTCCGTCTAGCTCCTCTCTTTC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGACTTGGCTCCGTTCTTTCTTCTGTCCGTCTAGCTCCTCTCTTTC  598

seq1  AGCTCGAGCTGCCATCTCAGTTGTACCGTTCCTCTCGAGCTGCTGGTCGG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCGAGCTGCCATCTCAGTTGTACCGTTCCTCTCGAGCTGCTGGTCGG  648

seq1  CCTGCAACACCCATTGTTCAGGCATGCTGCTGATTGGAACCCAGTACAAT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAACACCCATTGTTCAGGCATGCTGCTGATTGGAACCCAGTACAAT  698

seq1  ACAAAGGACTTGTCCAGGGGTGCACACACCTGTAGTGAGTGCTGCCATCT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGACTTGTCCAGGGGTGCACACACCTGTAGTGAGTGCTGCCATCT  748

seq1  CTCAAACACACACTCAAGCCTCTTAGGGAACAGTAATTAGTTGAGTGTAC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACACACACTCAAGCCTCTTAGGGAACAGTAATTAGTTGAGTGTAC  798

seq1  AACATTCCCATATTCCCAGCTTATACAGCTGGCTGGAGGCTACAAGTCAG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCCCATATTCCCAGCTTATACAGCTGGCTGGAGGCTACAAGTCAG  848

seq1  CTGAGGGTTCCTCTCCATTGGATTCAGGGAGCCTGGGGGTGGCCATGAGC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGTTCCTCTCCATTGGATTCAGGGAGCCTGGGGGTGGCCATGAGC  898

seq1  TTGAGGATGTGAGTGTTTCACTGTCTTTACTTTTTGCCTCAGGATTCCAG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGATGTGAGTGTTTCACTGTCTTTACTTTTTGCCTCAGGATTCCAG  948

seq1  ATTTAAGAAATGACAAAGGCAATCAGCTCTTTCATTCCTATGAAACTTTA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGAAATGACAAAGGCAATCAGCTCTTTCATTCCTATGAAACTTTA  998

seq1  CTGGGAAACCTGGGCTTTCTGGGGACCTGGGAATTC  1027
      ||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAACCTGGGCTTTCTGGGGACCTGGGAATTC  1034