BAC Information

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BAC

Clone NameB6Ng01-255G12
Chromosome15 (Build37)
Map Location 67,775,285 - 67,898,732
singlet/doubletdoublet
Overlap genenone
Upstream geneNdrg1, LOC100040667, St3gal1
Downstream geneZfat1, LOC100041000, EG665945, EG633752, Khdrbs3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255G12.bB6Ng01-255G12.g
ACCGA061620GA061621
length1,1311,168
definitionB6Ng01-255G12.b B6Ng01-255G12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,775,285 - 67,776,403)(67,897,555 - 67,898,732)
sequence
gaattcactaaaacatgcaagattcaggaaagagaggtgccgtggacctc
tgtatcttacttacagattctcactactctgaacttgttatggcccctct
tccagctggccttcagtattgctcattagccttgagcctctcttgctggt
tcatttttcacattagtcccagcgctcttcaactgtgatgaactccaggg
tgaagcctgaggccaccacatgtcattggattggagttctggggtggagg
gaattatcaagtccaggagattaccccataggaaggtttccatcccttta
cagtggacagggataggacagtatgagaagggcttataagggaagccacc
taggataacagggggagagtcttgatactggacacccaagatttgccagg
catcaagtaggttcaacaagggcccatcagtgtgcagtttttctgtgtta
aacaatattttccaaggctgccccaattctttttttacttgcattttaag
atgtttttctcctatgaagaaagaaaagcacttataacagtatttttaaa
agagattaagataaatatcatctgctgtaatcgtgctgggagggaagagt
ggggagagcacactcctttccgatgcaggaatatccttccatccacttcc
tcgtccctcctttagactacttttgtgtagctctccatgattagagtcct
ctccataatcatcaaagaagctttcagttcctgtcatttatgtatagtca
ttgctatgaggaaatatcatttcatggaccattaatgggcttaacagtcc
ttcttttcaaaggaaaacttctcacagttcatatttctcaaagcagagtc
aaaggaaaagcaatatgctatgacctctcatttctctccagctgatgttt
atttaacacctttccaaggcctggtgccctaagtatactgtccaatttta
gctcagccagcaaccccactggggttaggcatcaatacctttagaaacag
ggacataggttcagccaggtttagctactttgtaaatgttcacagtgtca
gggagccaatagtcatgattcacctccagggtggaggtaggagtcctgga
ctcttcacagaacattttcagaagaagacca
gaattctacatcttgatctaaatgtacccaggcaggagagagagagagag
agagagagagagagagagagagagagagagagagagagagagagagagag
aaacttccacacattggatggagcctgggcataggatctcaaagcccaac
tccacagcaatgacttcctccaacaagaccacacccactccaacaagacc
acactcactccaacaaggccacacttcctaatagtgccacttcccatggg
ccaaacatattcaaaccatttcagtagccaaccatgtttgccacactgtt
gccttagatgggctgcagaggtcataggtagaaataatcactactgatac
aatactgattgtcactttggggagaagggaatgagggttgatgcctgcaa
ttgaagatcacatgaggtatctctgatgctctactttgagtctgtatcag
ttacttatgtcattgctgtgccacaatgcccattaaaaagaagcccaaga
gaggaagtggcttttttggttcataatctcatgaactgaactggctgggt
ctgcagctatgggaaggtcaggctgttcacttgtatctggggggttgaaa
accagatagaaactgggctggatgaaggatttggctataaccattaatgt
ctgtaccttggcatccttcttcaatctgggtaccttctaaagggtccaca
aaatctaaaaataggactgccatctgggggccaacttattcaaacacatg
agtctgtggggagcatttttgtatccaaagcataactcagcccatcttca
actcagagcaatagcaggccttttggaatttgagccaatcaagtcagttg
ggatcaatcagtctaaatctaaaccattttgccaaataatgaatgtaata
acaaccccacatggacccagaacactttatctttaaataaggatgttgcc
taaaacatggagagaatttttctctttcaaatggggaaaggacatagaag
aagagatacccatacagaggtcaggccccaaggggaggaaagaatttcag
caaggcggcacttgacacaatggttcctggagcagtttcttctctactac
ttctggtatctgtggtgaggccaatccattaatgatgccaagttattcca
ggctcaactcgatccaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_67775285_67776403
seq2: B6Ng01-255G12.b_45_1175

seq1  GAATTCACTAAAACATGCAAGATTCAGGAAAGAGAGGTGCCGTGGACCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAAAACATGCAAGATTCAGGAAAGAGAGGTGCCGTGGACCTC  50

seq1  TGTATCTTACTTACAGATTCTCACTACTCTGAACTTGTTATGGCCCCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTTACTTACAGATTCTCACTACTCTGAACTTGTTATGGCCCCTCT  100

seq1  TCCAGCTGGCCTTCAGTATTGCTCATTAGCCTTGAGCCTCTCTTGCTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTGGCCTTCAGTATTGCTCATTAGCCTTGAGCCTCTCTTGCTGGT  150

seq1  TCATTTTTCACATTAGTCCCAGCGCTCTTCAACTGTGATGAACTCCAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTCACATTAGTCCCAGCGCTCTTCAACTGTGATGAACTCCAGGG  200

seq1  TGAAGCCTGAGGCCACCACATGTCATTGGATTGGAGTTCTGGGGTGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCTGAGGCCACCACATGTCATTGGATTGGAGTTCTGGGGTGGAGG  250

seq1  GAATTATCAAGTCCAGGAGATTACCCCATAGGAAGGTTTCCATCCCTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATCAAGTCCAGGAGATTACCCCATAGGAAGGTTTCCATCCCTTTA  300

seq1  CAGTGGACAGGGATAGGACAGTATGAGAAGGGCTTATAAGGGAAGCCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGACAGGGATAGGACAGTATGAGAAGGGCTTATAAGGGAAGCCACC  350

seq1  TAGGATAACAGGGGGAGAGTCTTGATACTGGACACCCAAGATTTGCCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATAACAGGGGGAGAGTCTTGATACTGGACACCCAAGATTTGCCAGG  400

seq1  CATCAAGTAGGTTCAACAAGGGCCCATCAGTGTGCAGTTTTTCTGTGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGTAGGTTCAACAAGGGCCCATCAGTGTGCAGTTTTTCTGTGTTA  450

seq1  AACAATATTTTCCAAGGCTGCCCCAATTCTTTTTTTACTTGCATTTTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATATTTTCCAAGGCTGCCCCAATTCTTTTTTTACTTGCATTTTAAG  500

seq1  ATGTTTTTCTCCTATGAAGAAAGAAAAGCACTTATAACAGTATTTTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTTCTCCTATGAAGAAAGAAAAGCACTTATAACAGTATTTTTAAA  550

seq1  AGAGATTAAGATAAATATCATCTGCTGTAATCGTGCTGGGAGGGAAGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTAAGATAAATATCATCTGCTGTAATCGTGCTGGGAGGGAAGAGT  600

seq1  GGGGAGAGCACACTCCTTTCCGATGCAGGAATATCCTTCCATCCACTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGAGCACACTCCTTTCCGATGCAGGAATATCCTTCCATCCACTTCC  650

seq1  TCGTCCCTCCTTTAGACTACTTTTGTGTAGCTCTCCATGATTAGAGTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCCCTCCTTTAGACTACTTTTGTGTAGCTCTCCATGATTAGAGTCCT  700

seq1  CTCCATAATCATCAAAGAAGCTTTCAGTTCCTGTCATTTATGTATAGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATAATCATCAAAGAAGCTTTCAGTTCCTGTCATTTATGTATAGTCA  750

seq1  TTGCTATGAGGAAATATCATTTCATGGACCATTAATGGGCTTAACAGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATGAGGAAATATCATTTCATGGACCATTAATGGGCTTAACAGTCC  800

seq1  TTCTTTTCAAAGGAAAACTTCTCACAGTTCATATTTCTCAAAGCAGAGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCAAAGGAAAACTTCTCACAGTTCATATTTCTCAAAGCAGAGTC  850

seq1  AAAGGAAAAGCAATATGCTATGACCTCTCATTTCTCTCCAGCTGATGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAAGCAATATGCTATGACCTCTCATTTCTCTCCAGCTGATGTTT  900

seq1  ATTTAACACC-TTCCAAGGCCTGGTGCCCTAAGTATACTGTCCAA-TTTA  948
      |||||||||| |||||||||||||||||||||||||||||||||| ||||
seq2  ATTTAACACCTTTCCAAGGCCTGGTGCCCTAAGTATACTGTCCAATTTTA  950

seq1  GCTCAGCCAGCAACCCCACTGGG--TAAGCATCAATACCCTTTAGAAACA  996
      |||||||||||||||||||||||  || ||||||||| ||||||||||||
seq2  GCTCAGCCAGCAACCCCACTGGGGTTAGGCATCAATA-CCTTTAGAAACA  999

seq1  GGGACATAGGTTCAGCCAGGTTAAGCTACTTTGTAAATG-TCACAGTGTC  1045
      |||||||||||||||||||||| |||||||||||||||| ||||||||||
seq2  GGGACATAGGTTCAGCCAGGTTTAGCTACTTTGTAAATGTTCACAGTGTC  1049

seq1  AGGAAGCC-ATAGTCATGATTCAACTCCA-GGTG--AGTAAGAGT-CTGA  1090
      ||| |||| |||||||||||||| ||||| ||||   ||| |||| ||| 
seq2  AGGGAGCCAATAGTCATGATTCACCTCCAGGGTGGAGGTAGGAGTCCTGG  1099

seq1  ACTCTTCACAG-ACATTTCCAGA--GAGACCA  1119
      ||||||||||| |||||| ||||   ||||||
seq2  ACTCTTCACAGAACATTTTCAGAAGAAGACCA  1131

seq1: chr15_67897555_67898732
seq2: B6Ng01-255G12.g_67_1234 (reverse)

seq1  TCTGGAATCTGAGTTGAAGCACTGGAATAACTTTGCATCATACACTGGAT  50
      ||||| ||| |||||| ||| |||||||||||| |||||||  | |||||
seq2  TCTGG-ATC-GAGTTG-AGC-CTGGAATAACTTGGCATCAT-TAATGGAT  45

seq1  TTGCCTCCACACAGAATCCAGAAGTAGTAGAGAAG-AACTGCTCATGAAA  99
      | |||||  ||||||  |||||||||||||||||| ||||||||  | ||
seq2  TGGCCTCACCACAGATACCAGAAGTAGTAGAGAAGAAACTGCTCCAGGAA  95

seq1  CCA-TGTGTCAAGTGCACGCCTTGCTTGAAATTCTTTCCCTCCCCTTGGG  148
      ||| |||||||||||| |||||||| ||||||||||| ||||||||||||
seq2  CCATTGTGTCAAGTGC-CGCCTTGC-TGAAATTCTTT-CCTCCCCTTGGG  142

seq1  GCCTTGACCTCTTGTATGGGTATCTTCTTCTTCTATGTCCTTTCCCCATT  198
      ||| ||||||| |||||||||||| |||||||||||||||||||||||||
seq2  GCC-TGACCTC-TGTATGGGTATC-TCTTCTTCTATGTCCTTTCCCCATT  189

seq1  TTGAAGAG-AAAATTCTCCTCATGTTTTATGCAACATCCTTATTTAAAAG  247
      |  ||||| |||||||||  ||||||||| ||||||||||||||| ||||
seq2  TGAAAGAGAAAAATTCTCTCCATGTTTTAGGCAACATCCTTATTT-AAAG  238

seq1  ATAATGTGTTCTGGGTCCATGTGGGTTTGTTATTACATTCATTATTTGGC  297
      |||| |||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATAAAGTGTTCTGGGTCCATGTGGGGTTGTTATTACATTCATTATTTGGC  288

seq1  AAAATGGTTTTAGATTTTAGACTGATTGATCCCAACTGACTTGATTGGCT  347
      ||||||| |||||| |||||||||||||||||||||||||||||||||||
seq2  AAAATGG-TTTAGA-TTTAGACTGATTGATCCCAACTGACTTGATTGGCT  336

seq1  CAAATTCCAAAAGGCCTGCTATTGCTCTGAGTTGAAGATGGGCTGAGTTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCCAAAAGGCCTGCTATTGCTCTGAGTTGAAGATGGGCTGAGTTA  386

seq1  TGCTTTGGATAC-AAAATGCTCCCCACAGACTCATGTGTTTGAATAAGTT  446
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGGATACAAAAATGCTCCCCACAGACTCATGTGTTTGAATAAGTT  436

seq1  GGCCCCCAGATGGCAGTCCTATTTTTAGATTTTGTGGACCCTTTAGAAGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCCAGATGGCAGTCCTATTTTTAGATTTTGTGGACCCTTTAGAAGG  486

seq1  TACCCAGATTGAAGAAGGATGCCAAGGTACAGACATTAATGGTTATAGCC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGATTGAAGAAGGATGCCAAGGTACAGACATTAATGGTTATAGCC  536

seq1  AAATCCTTCATCCAGCCCAGTTTCTATCTGGTTTTCAACCCCCCAGATAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTTCATCCAGCCCAGTTTCTATCTGGTTTTCAACCCCCCAGATAC  586

seq1  AAGTGAACAGCCTGACCTTCCCATAGCTGCAGACCCAGCCAGTTCAGTTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAACAGCCTGACCTTCCCATAGCTGCAGACCCAGCCAGTTCAGTTC  636

seq1  ATGAGATTATGAACCAAAAAAGCCACTTCCTCTCTTGGGCTTCTTTTTAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATTATGAACCAAAAAAGCCACTTCCTCTCTTGGGCTTCTTTTTAA  686

seq1  TGGGCATTGTGGCACAGCAATGACATAAGTAACTGATACAGACTCAAAGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATTGTGGCACAGCAATGACATAAGTAACTGATACAGACTCAAAGT  736

seq1  AGAGCATCAGAGATACCTCATGTGATCTTCAATTGCAGGCATCAACCCTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATCAGAGATACCTCATGTGATCTTCAATTGCAGGCATCAACCCTC  786

seq1  ATTCCCTTCTCCCCAAAGTGACAATCAGTATTGTATCAGTAGTGATTATT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTTCTCCCCAAAGTGACAATCAGTATTGTATCAGTAGTGATTATT  836

seq1  TCTACCTATGACCTCTGCAGCCCATCTAAGGCAACAGTGTGGCAAACATG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTATGACCTCTGCAGCCCATCTAAGGCAACAGTGTGGCAAACATG  886

seq1  GTTGGCTACTGAAATGGTTTGAATATGTTTGGCCCATGGGAAGTGGCACT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTACTGAAATGGTTTGAATATGTTTGGCCCATGGGAAGTGGCACT  936

seq1  ATTAGGAAGTGTGGCCTTGTTGGAGTGAGTGTGGTCTTGTTGGAGTGGGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGAAGTGTGGCCTTGTTGGAGTGAGTGTGGTCTTGTTGGAGTGGGT  986

seq1  GTGGTCTTGTTGGAGGAAGTCATTGCTGTGGAGTTGGGCTTTGAGATCCT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTTGTTGGAGGAAGTCATTGCTGTGGAGTTGGGCTTTGAGATCCT  1036

seq1  ATGCCCAGGCTCCATCCAATGTGTGGAAGTTTCTCTCTCTCTCTCTCTCT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCAGGCTCCATCCAATGTGTGGAAGTTTCTCTCTCTCTCTCTCTCT  1086

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTG  1136

seq1  CCTGGGTACATTTAGATCAAGATGTAGAATTC  1178
      ||||||||||||||||||||||||||||||||
seq2  CCTGGGTACATTTAGATCAAGATGTAGAATTC  1168