BAC Information

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BAC

Clone NameB6Ng01-255L16
Chromosome15 (Build37)
Map Location 92,134,475 - 92,135,451
singlet/doubletsinglet
Overlap geneCntn1
Upstream geneSlc2a13, Lrrk2, Muc19, Smgc, LOC100042529
Downstream genePdzrn4, LOC100042552, LOC100043283, Glt8d3, Yaf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255L16.bB6Ng01-255L16.g
ACCGA061866GA061867
length979426
definitionB6Ng01-255L16.b B6Ng01-255L16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaacaacaaatagctttatcattcagttaaatggaagagtctta
tgagaacacagtcacacagggaaacatgttcttggtaaaaggacacttat
ttcataaattagatatagttgaagatgccggagtacagaagaataaccat
ccaggagatgatgctgttcctgctgatcacagaactcctgtctgccccca
acccccatggcatctactccctgttaactcctccctctgctacagaagga
gtatagctcccatacatcattttctcagcccgtggaatctgccattccaa
gaaccggcagtacaccatgtgccatctccccacttcctctccctttccct
tgcaagctgtcacgatcagttccactcacttatctcattgtctactgctc
ctcaactcctgaagactgagttgtacaagggcaggaattctatgaatttc
cttttctttttatcctcaacacctagagcagggctgaaaggatacaggct
ggctggctgtactgcagaactgaatggccatagaatgaatccagactcta
gaatatctaggttgtcatcagaagaggctttcgggaggtgtaggagtgca
ggtgcctgcggggaagggtggtgccgctcctgtgagtaagaggttggctc
tggcacctgcctcctgagcattgcagcaatgtttcatttcctggaacttg
ctcagggtgtctccagaagacatatgtcattttcaaggagatttgtgccg
gaactgacaacccggaattaaaggtagccctaatattttctatttgccct
tctgaaggtctaatttttatgatgtttgcactttgggatagcacaccaca
cacaataaggtatcaagccttacttcatttcagccactgctttaatctat
tttaatctgttacagtagtcactcaaagggcttgaccctaagaggcaaac
ttttcatttacttttttatggactgaaag

cagagttcaattcccagcaactgcatggtggctcacaaccatctgtaatg
ggatccaatgtagttttcaggtatatctgaagacagggacagtgtactca
catataaaataatcaaataaatcttggggcctagcaaacacataagtgga
tgctcacagtcagctattggatggatcacagggcccccaatggaggagct
agagaaagtatccaaggagctaaagagatctgcaaccctgtaggtgcaac
attatgaactaaccagtatccctgagctcttgactctagctgcatatgta
tcaaaagatggcctagtcggccatcactggaaagagaggcccattggaca
ggcaaactttatatgccccagtacaggggaacgccagggccaaaaagtgg
gagtgggtggatagggaagtgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_92134475_92135451
seq2: B6Ng01-255L16.b_47_1025 (reverse)

seq1  CTTTCAGT-CAT-AAAAAGTAAATGAAAAGTTTGCCTCTTAGGGTCAAGC  48
      |||||||| ||| |||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGTCCATAAAAAAGTAAATGAAAAGTTTGCCTCTTAGGGTCAAGC  50

seq1  CCTTTGAGTGACTACTGTAACAGATTAAAATAGATTAAAGCAGTGGCTGA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGAGTGACTACTGTAACAGATTAAAATAGATTAAAGCAGTGGCTGA  100

seq1  AATGAAGTAAGGCTTGATACCTTATTGTGTGTGGTGTGCTATCCCAAAGT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGTAAGGCTTGATACCTTATTGTGTGTGGTGTGCTATCCCAAAGT  150

seq1  GCAAACATCATAAAAATTAGACCTTCAGAAGGGCAAATAGAAAATATTAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACATCATAAAAATTAGACCTTCAGAAGGGCAAATAGAAAATATTAG  200

seq1  GGCTACCTTTAATTCCGGGTTGTCAGTTCCGGCACAAATCTCCTTGAAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACCTTTAATTCCGGGTTGTCAGTTCCGGCACAAATCTCCTTGAAAA  250

seq1  TGACATATGTCTTCTGGAGACACCCTGAGCAAGTTCCAGGAAATGAAACA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATATGTCTTCTGGAGACACCCTGAGCAAGTTCCAGGAAATGAAACA  300

seq1  TTGCTGCAATGCTCAGGAGGCAGGTGCCAGAGCCAACCTCTTACTCACAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCAATGCTCAGGAGGCAGGTGCCAGAGCCAACCTCTTACTCACAG  350

seq1  GAGCGGCACCACCCTTCCCCGCAGGCACCTGCACTCCTACACCTCCCGAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGGCACCACCCTTCCCCGCAGGCACCTGCACTCCTACACCTCCCGAA  400

seq1  AGCCTCTTCTGATGACAACCTAGATATTCTAGAGTCTGGATTCATTCTAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTTCTGATGACAACCTAGATATTCTAGAGTCTGGATTCATTCTAT  450

seq1  GGCCATTCAGTTCTGCAGTACAGCCAGCCAGCCTGTATCCTTTCAGCCCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATTCAGTTCTGCAGTACAGCCAGCCAGCCTGTATCCTTTCAGCCCT  500

seq1  GCTCTAGGTGTTGAGGATAAAAAGAAAAGGAAATTCATAGAATTCCTGCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAGGTGTTGAGGATAAAAAGAAAAGGAAATTCATAGAATTCCTGCC  550

seq1  CTTGTACAACTCAGTCTTCAGGAGTTGAGGAGCAGTAGACAATGAGATAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTACAACTCAGTCTTCAGGAGTTGAGGAGCAGTAGACAATGAGATAA  600

seq1  GTGAGTGGAACTGATCGTGACAGCTTGCAAGGGAAAGGGAGAGGAAGTGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTGGAACTGATCGTGACAGCTTGCAAGGGAAAGGGAGAGGAAGTGG  650

seq1  GGAGATGGCACATGGTGTACTGCCGGTTCTTGGAATGGCAGATTCCACGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATGGCACATGGTGTACTGCCGGTTCTTGGAATGGCAGATTCCACGG  700

seq1  GCTGAGAAAATGATGTATGGGAGCTATACTCCTTCTGTAGCAGAGGGAGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAAAATGATGTATGGGAGCTATACTCCTTCTGTAGCAGAGGGAGG  750

seq1  AGTTAACAGGGAGTAGATGCCATGGGGGTTGGGGGCAGACAGGAGTTCTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACAGGGAGTAGATGCCATGGGGGTTGGGGGCAGACAGGAGTTCTG  800

seq1  TGATCAGCAGGAACAGCATCATCTCCTGGATGGTTATTCTTCTGTACTCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGCAGGAACAGCATCATCTCCTGGATGGTTATTCTTCTGTACTCC  850

seq1  GGCATCTTCAACTATATCTAATTTATGAAATAAGTGTCCTTTTACCAAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTTCAACTATATCTAATTTATGAAATAAGTGTCCTTTTACCAAGA  900

seq1  ACATGTTTCCCTGTGTGACTGTGTTCTCATAAGACTCTTCCATTTAACTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTTCCCTGTGTGACTGTGTTCTCATAAGACTCTTCCATTTAACTG  950

seq1  AATGATAAAGCTATTTGTTGTTTGAATTC  977
      |||||||||||||||||||||||||||||
seq2  AATGATAAAGCTATTTGTTGTTTGAATTC  979


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