MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-256B03
Chromosome	15 (Build37)	X (Build37)
Map Location	8,466,581 - 8,467,442	131,145,051 - 131,145,423
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	Gdnf, Wdr70, LOC665556, LOC621001, Nup155, 2410089E03Rik, LOC100039599, Nipbl, EG666437
Downstream gene	LOC100039560, LOC100039633, Slc1a3, EG622770, LOC268781, LOC382969, LOC100039619, Ranbp3l, 1110020G09Rik, Skp2, Lmbrd2, LOC666503, Ugt3a1, LOC100039661, Ugt3a2, LOC383094, Capsl, Il7r
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gdnf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14573 MGI:107430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wdr70 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545085 MGI:1921020
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665556 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665556
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins pseudo : _no_value

name	LOC621001 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621001
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 767 ESTs, 2 Proteins pseudo : _no_value

name	Nup155 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170762 MGI:2181182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410089E03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73692 MGI:1920942
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 42 ESTs

name	LOC100039599 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039599
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 40 ESTs, 1 Protein pseudo : _no_value

name	Nipbl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71175 MGI:1913976
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG666437 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666437 MGI:3648999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC100039560 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039560
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100039633 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039633
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein

name	Slc1a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20512 MGI:99917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622770 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622770 MGI:3644431
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC268781 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:268781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins pseudo : _no_value

name	LOC382969 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382969
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 15 ESTs, 6 Proteins pseudo : _no_value

name	LOC100039619 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039619
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs, 1 Protein

name	Ranbp3l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223332 MGI:2444654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110020G09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68646 MGI:1915896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Skp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27401 MGI:1351663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Lmbrd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320506 MGI:2444173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666503 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ugt3a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105887 MGI:2146055
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039661 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039661
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 33 ESTs, 2 Proteins pseudo : _no_value

name	Ugt3a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223337 MGI:2145969
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383094 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	Capsl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75568 MGI:1922818
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il7r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16197 MGI:96562
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gdnf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129978 GeneID:14573 MGI:107430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glial cell line derived neurotrophic factor transcript_id : NM_010275.2

name	Wdr70 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487148 GeneID:545085 MGI:1921020
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 70 transcript_id : NM_001081402.1

name	Nup155 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31559997 GeneID:170762 MGI:2181182
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleoporin 155 transcript_id : NM_133227.2

name	Nipbl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:49169844 GeneID:71175 MGI:1913976
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Nipped-B homolog (Drosophila) transcript_id : NM_027707.2

name	Nipbl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51371927 GeneID:71175 MGI:1913976
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Nipped-B homolog (Drosophila) transcript_id : NM_201232.1

name	EG666437 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94398410 GeneID:666437 MGI:3648999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG666437 transcript_id : XM_983841.1

name	LOC100039560 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266390 GeneID:100039560
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Keratin associated protein 10-4 transcript_id : XM_001473114.1

name	LOC100039633 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266399 GeneID:100039633
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein product : similar to 2900006F19Rik protein transcript_id : XM_001473194.1

name	Slc1a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254195 GeneID:20512 MGI:99917
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 1 (glial high affinity glutamate transporter), member 3 transcript_id : NM_148938.2

name	EG622770 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149266393 GeneID:622770 MGI:3644431
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG622770 transcript_id : XM_897306.3

name	LOC100039619 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266397 GeneID:100039619
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs, 1 Protein product : similar to RAN binding protein 3-like transcript_id : XM_001473207.1

name	Ranbp3l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37574123 GeneID:223332 MGI:2444654
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAN binding protein 3-like transcript_id : NM_198024.1

name	1110020G09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144226207 GeneID:68646 MGI:1915896
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110020G09 gene transcript_id : NM_001040395.2

name	Skp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909358 GeneID:27401 MGI:1351663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S-phase kinase-associated protein 2 (p45) transcript_id : NM_013787.2

name	Skp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909362 GeneID:27401 MGI:1351663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S-phase kinase-associated protein 2 (p45) transcript_id : NM_145468.1

name	Lmbrd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31581567 GeneID:320506 MGI:2444173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LMBR1 domain containing 2 transcript_id : NM_177178.3

name	Ugt3a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402180 GeneID:105887 MGI:2146055
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP glycosyltransferases 3 family, polypeptide A1 transcript_id : NM_207216.1

name	Ugt3a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365155 GeneID:223337 MGI:2145969
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP glycosyltransferases 3 family, polypeptide A2 transcript_id : NM_144845.3

name	Capsl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312981 GeneID:75568 MGI:1922818
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcyphosine-like transcript_id : NM_029341.1

name	Il7r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45269151 GeneID:16197 MGI:96562
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 7 receptor transcript_id : NM_008372.3

name	Gdnf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7110601 CCDS:CCDS27371.1 GeneID:14573 MGI:107430
definition	GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005160 - transforming growth factor beta receptor binding [Evidence TAS] GO_process : GO:0006916 - anti-apoptosis [Evidence IMP]; GO:0001759 - induction of an organ [Evidence IGI]; GO:0001656 - metanephros development [Evidence IGI]; GO:0007399 - nervous system development [Evidence IMP]; GO:0001755 - neural crest cell migration [Evidence ISS]; GO:0031175 - neurite development [Evidence ISS]; GO:0007422 - peripheral nervous system development [Evidence IMP]; GO:0030432 - peristalsis [Evidence IMP]; GO:0001941 - postsynaptic membrane organization [Evidence IDA]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence TAS]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence TAS]; GO:0001657 - ureteric bud development [Evidence IGI] [Evidence IDA] codon_start : 1 note : glial cell line-derived neurotrophic factor product : glial cell line derived neurotrophic factor protein_id : NP_034405.1

name	Wdr70 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487149 GeneID:545085 MGI:1921020
definition	codon_start : 1 product : WD repeat domain 70 protein_id : NP_001074871.1

name	Nup155 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559998 GeneID:170762 MGI:2181182
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005643 - nuclear pore [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0005487 - nucleocytoplasmic transporter activity [Evidence IEA]; GO:0015288 - porin activity [Evidence IEA]; GO:0017056 - structural constituent of nuclear pore [Evidence IEA] GO_process : GO:0006913 - nucleocytoplasmic transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : nucleoporin 155 protein_id : NP_573490.2

name	Nipbl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49169845 GeneID:71175 MGI:1913976
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA] codon_start : 1 note : isoform A is encoded by transcript variant A product : delangin isoform A protein_id : NP_081983.2

name	Nipbl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51371928 GeneID:71175 MGI:1913976
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA] codon_start : 1 note : isoform B is encoded by transcript variant B product : delangin isoform B protein_id : NP_957684.1

name	EG666437 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94398411 GeneID:666437 MGI:3648999
definition	codon_start : 1 product : hypothetical protein protein_id : XP_988935.1

name	LOC100039560 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266391 GeneID:100039560
definition	codon_start : 1 product : similar to Keratin associated protein 10-4 protein_id : XP_001473164.1

name	LOC100039633 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266400 GeneID:100039633
definition	codon_start : 1 product : similar to 2900006F19Rik protein protein_id : XP_001473244.1

name	Slc1a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24233554 CCDS:CCDS27373.1 GeneID:20512 MGI:99917
definition	GO_component : GO:0042995 - cell projection [Evidence IDA]; GO:0043025 - cell soma [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0017153 - sodium:dicarboxylate symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : glial high affinity glutamate transporter; solute carrier family 1, member 3; glutamate/aspartate transporter product : solute carrier family 1 (glial high affinity glutamate transporter), member 3 protein_id : NP_683740.1

name	EG622770 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149266394 GeneID:622770 MGI:3644431
definition	codon_start : 1 product : hypothetical protein protein_id : XP_902399.3

name	LOC100039619 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266398 GeneID:100039619
definition	codon_start : 1 product : similar to RAN binding protein 3-like protein_id : XP_001473257.1

name	Ranbp3l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37574124 GeneID:223332 MGI:2444654
definition	GO_process : GO:0046907 - intracellular transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : RAN binding protein 3-like protein_id : NP_932141.1

name	1110020G09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94536713 GeneID:68646 MGI:1915896
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003951 - NAD+ kinase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : hypothetical protein LOC68646 protein_id : NP_001035485.1

name	Skp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7949135 GeneID:27401 MGI:1351663
definition	GO_component : GO:0000151 - ubiquitin ligase complex [Evidence TAS] GO_function : GO:0016301 - kinase activity [Evidence IEA] GO_process : GO:0000082 - G1/S transition of mitotic cell cycle [Evidence IDA]; GO:0008634 - negative regulation of survival gene product activity [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IPI]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IDA] codon_start : 1 note : isoform a is encoded by transcript variant 1; p45 product : S-phase kinase-associated protein 2 isoform a protein_id : NP_038815.1

name	Skp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70909363 GeneID:27401 MGI:1351663
definition	GO_component : GO:0000151 - ubiquitin ligase complex [Evidence TAS] GO_function : GO:0016301 - kinase activity [Evidence IEA] GO_process : GO:0000082 - G1/S transition of mitotic cell cycle [Evidence IDA]; GO:0008634 - negative regulation of survival gene product activity [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IPI]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IDA] codon_start : 1 note : isoform b is encoded by transcript variant 2; p45 product : S-phase kinase-associated protein 2 isoform b protein_id : NP_663443.1

name	Lmbrd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559855 GeneID:320506 MGI:2444173
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : LMBR1 domain containing 2 protein_id : NP_796152.2

name	Ugt3a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402181 CCDS:CCDS27374.1 GeneID:105887 MGI:2146055
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : UDP glucuronosyltransferase 3 family, polypeptide A1 product : UDP glycosyltransferases 3 family, polypeptide A1 protein_id : NP_997099.1

name	Ugt3a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450243 CCDS:CCDS27375.1 GeneID:223337 MGI:2145969
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : UDP glucuronosyltransferase 3 family, polypeptide A2 product : UDP glycosyltransferases 3 family, polypeptide A2 protein_id : NP_659094.1

name	Capsl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110835711 GeneID:75568 MGI:1922818
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 note : Calcyphosine product : calcyphosine-like protein_id : NP_083617.2

name	Il7r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45269152 CCDS:CCDS27376.1 GeneID:16197 MGI:96562
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004896 - hematopoietin/interferon-class (D200-domain) cytokine receptor activity [Evidence IEA]; GO:0004907 - interleukin receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA]; GO:0048535 - lymph node development [Evidence IMP] codon_start : 1 note : IL-7 receptor alpha chain product : interleukin 7 receptor precursor protein_id : NP_032398.3

name	LOC666503 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666503
definition	number : 5 pseudo : _no_value

name	LOC666503 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666503
definition	number : 4 pseudo : _no_value

name	LOC666503 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666503
definition	number : 3 pseudo : _no_value

name	LOC666503 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666503
definition	number : 2 pseudo : _no_value

name	LOC666503 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666503
definition	number : 1 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 1 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 2 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 3 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 4 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 5 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 6 pseudo : _no_value

name	LOC665556 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266392 GeneID:665556
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins product : similar to Btf3 protein pseudo : _no_value transcript_id : XR_031044.1

name	LOC621001 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266389 GeneID:621001
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 767 ESTs, 2 Proteins product : similar to Ribosomal protein L19 pseudo : _no_value transcript_id : XR_031037.1

name	2410089E03Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149266388 GeneID:73692 MGI:1920942
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 42 ESTs product : RIKEN cDNA 2410089E03 gene transcript_id : XR_001570.2

name	LOC100039599 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266395 GeneID:100039599
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 40 ESTs, 1 Protein product : hypothetical protein LOC100039599 pseudo : _no_value transcript_id : XR_031061.1

name	LOC268781 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266401 GeneID:268781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : similar to Myotubularin related protein 3 pseudo : _no_value transcript_id : XR_031101.1

name	LOC382969 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266396 GeneID:382969
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 15 ESTs, 6 Proteins product : similar to uracil DNA glycosylase pseudo : _no_value transcript_id : XR_031075.1

name	LOC100039661 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266403 GeneID:100039661
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 33 ESTs, 2 Proteins product : similar to UDP glycosyltransferases 3 family, polypeptide A1 pseudo : _no_value transcript_id : XR_031131.1

clone name	MSMg01-521G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394F24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-544F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300L18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-358A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264F20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-370B05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-335P19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-476E24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-269E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503F16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-212G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148E14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-370A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158I07
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-256B03.b	B6Ng01-256B03.g
ACC	GA062122	GA062123
length	1,165	437
definition	B6Ng01-256B03.b	B6Ng01-256B03.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(8,466,581 - 8,467,442)	(131,145,051 - 131,145,423)
sequence	gaattctttgtttagctctgaaccccattttttaataggtttatttgatt ttctggagtccatcttcttgagttctttgtatatattggatattagttcc ctatcagatttaggattggtaaagatcctttcctaatctgttggtggcct ttttgtcttattgacggtgtcttttgccttacagaagctttgcaatttta tgaggtcccatttgtcgattctcgatcttacagcacaagctattgctgtt ctgttcaggaatttttcccctgtgcccatatcttcgaggcttttccccac tttctcctctataagtttcagtgtttctagttttatgtggaattccttga tccacttagacttgaactttgtacaaggaggtaagaatggatcaatttgc attcttctacatgataaccgccagttgtgccggcaccattcgttgaaaat gctgtcttttttccactggatgattttagcctccttgtcaaagatcaaat gaccataggtgtgtggattcatttctgggtcttcaattctattccattca tttacctgtctgttgctgtaccagtaccacgctgtttgttgttggttttg ttttgttttgttttgttttgttttgttttgttttgttttgttttgttttg ttttgttttgtatcacaattgctctgtagtacagcttgaggtcaggcatg gtgattccaccagaggttcttttattgttgagaatagtttttgccatcct aggttttttgttattagttgcatttttaattcctctacataattttaact tttgctatataatctaagctggtattaatcttaagtacagcccatatgtg aaagcacaagaatttctccctttttctacctattaaatgatattaatggc atgtaatcattaatacgtttcacagtcttggttgctattatgaatggttg agtatcagtttgaggtatagaatattattgcctgaatcctgtatgatgcc agacgatatgattactagagggaaactagatttgtttcactgtctttata cgaattcatactttagagagagatcattttttatgacgtaagcctttata gaatctgaccaactagtagctttcaattgatgtttgctaaccaaattaaa aggtttaatatcaag	ctgagaaaataaagagtactttaagagaggggctggagagatggctcagc agttaagagcacttccagaggtcctgagttcaattctcagcaaccacgtg gtggctcacaaccatctgtaattggatctgaagccctcttctggtgtgtc agaaatagcatgctcatatacatacataaataaatcctttttttaaaaag agtaaaaggaacaaatgagcccatagtattagtataaaaatagtttttat cccagcacgcttctccaaggagactctgtcccatgctttgagaactgtta gtacaatggaaggtgaatgaaagaaagagaaaatgttaaataaactcagg aaagaggactggggaaatgactcatttggtatggttgcatgatgtgtgta tgagggcttgagttccagcctcggaacagtgcccatg
quality values	Open. Hide. 58 33 18 30 58 54 58 58 58 58 58 58 41 39 54 62 62 62 62 62 47 56 62 62 62 54 42 62 62 62 56 51 42 32 21 32 32 21 28 27 56 62 62 54 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 42 46 58 58 54 58 58 54 58 54 42 58 58 58 54 58 58 58 58 58 58 58 58 58 58 54 52 58 58 54 54 54 58 54 58 58 58 58 58 47 58 52 58 58 54 58 58 58 54 58 58 58 58 45 39 58 58 52 58 58 58 58 58 58 58 58 54 58 54 58 58 51 52 58 58 58 58 58 58 58 58 46 41 58 58 58 53 58 58 51 52 58 58 58 58 51 58 54 58 53 51 58 58 58 58 53 52 51 49 49 58 58 52 58 41 40 58 53 58 51 58 49 58 58 58 49 58 58 46 52 58 58 40 58 58 54 58 50 58 58 44 58 49 58 58 58 58 50 58 58 46 58 39 54 54 54 58 50 58 58 51 58 37 58 58 58 58 50 58 58 47 58 50 58 58 58 58 35 58 58 58 58 52 58 58 44 49 32 54 54 51 54 34 53 54 49 54 24 54 42 53 45 49 37 51 49 44 49 52 54 53 41 51 42 53 32 41 42 45 42 42 53 51 54 51 39 35 46 29 53 37 34 54 27 35 39 51 49 32 49 34 34 40 53 42 37 34 46 31 30 28 9 44 39 53 53 37 54 54 33 35 44 46 46 30 47 40 51 26 46 32 32 32 31 34 53 47 46 51 32 32 46 35 35 44 32 32 32 18 52 33 53 53 53 53 53 33 24 52 31 32 52 42 30 45 51 38 42 31 43 51 51 46 40 28 25 40 41 35 48 31 51 31 36 43 30 51 31 30 27 51 51 43 30 31 39 30 47 46 43 38 31 31 42 30 32 31 31 48 30 46 36 42 30 26 43 38 31 46 22 32 29 38 31 27 31 42 31 21 31 43 31 27 17 31 28 32 30 33 31 25 14 20 19 37 31 31 39 46 30 32 30 26 25 19 16 17 32 32 30 46 39 37 16 15 46 11 37 44 48 44 36 36 33 33 36 39 21 25 22 17 25 48 32 31 32 26 22 36 32 31 25 23 32 38 38 28 33 27 31 24 31 24 17 31 12 18 22 21 20 24 16 21 23 33 39 29 32 22 21 14 21 32 37 19 32 24 26 21 30 32 28 31 33 19 28 32 32 24 26 30 14 17 26 8 25 15 23 14 21 21 19 6 5 5 10 34 8 16 17 10 9 6 6 17 27 11 21 18 26 17 16 20 8 12 21 24 11 21 27 28 9 17 14 25 27 26 28 16 24 27 27 24 18 27 18 23 17 13 21 3 8 22 7 31 14 20 15 9 21 10 20 28 9 5 16 4 22 17 13 18 13 3 4 18 16 25 16 30 23 8 12 25 14 8 7 6 13 15 12 16 11 28 17 10 5 17 4 2 5 15 7 8 16 10 18 5 14 17 22 18 16 6 16 6 11 5 9 5 13 15 15 15 15 28 28 27 6 5 5 6 12 22 9 4 3 5 12 5 8 6 16 28 6 4 10 10 13 16 16 6 7 7 16 11 9 5 16 16 3 7 4 1 3 2 3 3 3 16 11 8 7 8 14 8 18 10 4 8 6 7 5 5 1 3 8 8 7 26 10 12 5 16 11 5 28 25 6 5 3 3 11 6 18 9 2 1 1 2 3 2 2	Open. Hide. 62 62 62 59 43 59 56 34 28 46 50 32 31 45 62 62 62 62 59 62 62 59 62 62 62 62 62 62 59 62 62 62 41 59 62 62 54 16 59 30 32 21 56 59 49 59 62 34 18 18 12 11 17 23 13 12 13 50 51 43 43 43 46 46 43 59 49 48 54 40 62 56 59 59 50 59 59 49 59 59 59 49 49 59 62 59 59 59 59 49 59 59 51 59 56 51 59 50 56 56 59 39 30 24 13 16 18 13 14 46 43 34 41 30 34 27 24 62 59 54 62 62 62 62 56 59 62 59 59 49 59 51 46 48 48 56 56 59 59 62 62 59 59 59 51 59 59 59 34 41 38 18 56 41 43 49 34 34 43 43 49 59 45 36 50 43 46 34 36 35 36 22 59 49 59 59 59 51 56 46 49 49 56 50 56 51 56 46 50 56 56 18 18 12 11 18 19 19 51 43 50 39 39 43 46 34 34 34 59 46 50 50 43 43 49 50 48 44 30 34 38 34 34 43 34 16 29 36 50 59 56 39 56 38 43 34 43 43 43 49 41 34 24 27 38 49 24 41 34 34 34 34 40 50 39 46 43 46 48 59 59 59 59 59 43 43 30 30 34 56 56 43 49 59 59 59 23 39 30 27 28 31 17 28 36 30 46 50 49 49 49 31 23 17 16 18 30 13 32 34 26 37 39 34 49 30 34 48 27 40 34 18 48 23 34 36 23 17 36 50 39 39 30 40 34 34 10 23 10 12 16 13 39 34 49 33 34 43 34 41 50 22 16 23 27 23 27 23 18 40 38 35 39 27 56 30 46 46 36 33 38 34 28 27 35 34 23 34 30 49 22 16 18 18 24 24 49 18 17 10 16 16 23 28 17 34 34 34 18 34 39 49 43 40 43 51 18 24 10 16 21 19 13 10 24 49 18 40 30 28 23 13 20 28 28 23 16 17 24 23 28 21 23 34 36 30 30 21 12 32 49 23 23 23 19 20 30

Alignment Information

BAC End 1

BAC End 2

seq1: chr15_8466581_8467442
seq2: B6Ng01-256B03.b_352_1210

seq1  CTCTATAAGTTTCAGTGTTTCTAGTTTTATGTGGAATTCCTTGATCCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATAAGTTTCAGTGTTTCTAGTTTTATGTGGAATTCCTTGATCCACT  50

seq1  TAGACTTGAACTTTGTACAAGGAGGTAAGAATGGATCAATTTGCATTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTGAACTTTGTACAAGGAGGTAAGAATGGATCAATTTGCATTCTT  100

seq1  CTACATGATAACCGCCAGTTGTGCCGGCACCATTCGTTGAAAATGCTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGATAACCGCCAGTTGTGCCGGCACCATTCGTTGAAAATGCTGTC  150

seq1  TTTTTTCCACTGGATGATTTTAGCCTCCTTGTCAAAGATCAAATGACCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCACTGGATGATTTTAGCCTCCTTGTCAAAGATCAAATGACCAT  200

seq1  AGGTGTGTGGATTCATTTCTGGGTCTTCAATTCTATTCCATTCATTTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGTGGATTCATTTCTGGGTCTTCAATTCTATTCCATTCATTTACC  250

seq1  TGTCTGTTGCTGTACCAGTACCACGCTGTTTGTTGTTGGTTTTGTTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTGCTGTACCAGTACCACGCTGTTTGTTGTTGGTTTTGTTTTGT  300

seq1  TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT  350

seq1  TTTGTATCACAATTGCTCTGTAGTACAGCTTGAGGTCAGGCATGGTGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATCACAATTGCTCTGTAGTACAGCTTGAGGTCAGGCATGGTGATT  400

seq1  CCACCAGAGGTTCTTTTATTGTTGAGAATAGTTTTTGCCATCCTAGGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGAGGTTCTTTTATTGTTGAGAATAGTTTTTGCCATCCTAGGTTT  450

seq1  TTTGTTATTAGTTGCATTTTTAATTCCTCTACATAATTTTAACTTTTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTATTAGTTGCATTTTTAATTCCTCTACATAATTTTAACTTTTGCT  500

seq1  ATATAATCTAAGCTGGTATTAATCTTAAGTACAGCCCATATGTGAAAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATCTAAGCTGGTATTAATCTTAAGTACAGCCCATATGTGAAAGCA  550

seq1  CAAGAATTTCT-CCTTTTTCTACCTATTAAATGATATTAATGGCATGTAA  599
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATTTCTCCCTTTTTCTACCTATTAAATGATATTAATGGCATGTAA  600

seq1  TCATTAATACGTTTCACAGTCTTGGTTGCTATTATGAAATGGTTGAGTAT  649
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  TCATTAATACGTTTCACAGTCTTGGTTGCTATTATG-AATGGTTGAGTA-  648

seq1  TCAAGTTGAGGTATAGAATATTATTGCCTGAATCCCTGTATGATGCCAGA  699
      |||  |||||||||||||||||||||||||||| ||||||||||||||| 
seq2  TCAGTTTGAGGTATAGAATATTATTGCCTGAAT-CCTGTATGATGCCAG-  696

seq1  ACGATAATGATTACTAGAGGGAAACCAGATTTGTTTCACTGTCTTTAAAA  749
      ||||| ||||||||||||||||||| |||||||||||||||||||| | |
seq2  ACGAT-ATGATTACTAGAGGGAAACTAGATTTGTTTCACTGTCTTT-ATA  744

seq1  CAGAATCATACTTTAGAGAAGAGATCATTTTATA-GACGTAAG-CTTTAT  797
      |  | ||||||||||||| |||||||||||| || |||||||| ||||||
seq2  CGAATTCATACTTTAGAG-AGAGATCATTTTTTATGACGTAAGCCTTTAT  793

seq1  AGAATCTGACAAACTAGTTTAGCTTTCTATTGATGTTTGGGTAACACATT  847
      |||||||||| ||||||  |||||||| |||||||||||   | || |||
seq2  AGAATCTGACCAACTAG--TAGCTTTCAATTGATGTTTGCTAACCAAATT  841

seq1  AAAAG--TTAATA-CAAG  862
      |||||  |||||| ||||
seq2  AAAAGGTTTAATATCAAG  859

seq1: chrX_131145051_131145423
seq2: B6Ng01-256B03.g_101_263 (reverse)

seq1  AAAAAAAGGATTTATTTGAGGCTGGAGAGATGGCTCAGCGGTTAAGAGCA  50
                                                        
seq2  --------------------------------------------------  0

seq1  CTGAGTGCTCTTCCGAAGGTCCTGAGTTCTTATCCCAGCAACCACATGGT  100
                                                        
seq2  --------------------------------------------------  0

seq1  GGTTCATGACCATCCGTCTATCCGTAATGGGATCTGATACACTCTTCTGG  150
                                                        
seq2  --------------------------------------------------  0

seq1  GTGTCTGAAGACAGCGAGTATACTTACATATAATAAATAAATCTTTAAAA  200
                                             ||     ||||
seq2  ---------------------------------------AA-----AAAA  6

seq1  AGTATTTATTTA---ATGTATATGAG--TGCTCTGTCTCCATGAACATCT  245
      || |||||||||   |||||||||||  |||| | ||    |||      
seq2  AGGATTTATTTATGTATGTATATGAGCATGCTATTTC----TGA------  46

seq1  GCATGCCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAGCCATC  295
       ||  |||||||||||| |||||||| ||||||||||||||||||||| |
seq2  -CACACCAGAAGAGGGCTTCAGATCCAATTACAGATGGTTGTGAGCCACC  95

seq1  ATGTGGTTGTTGGGAATTGAACTCAGGATCTCTGGATGAGCAAACCAGTG  345
      | ||||||| || ||||||||||||||| |||||||          ||||
seq2  ACGTGGTTGCTGAGAATTGAACTCAGGACCTCTGGA----------AGTG  135

seq1  CTCTTAATTACTGAGCCATCTCTCCAGC  373
      ||||||| | ||||||||||||||||||
seq2  CTCTTAACTGCTGAGCCATCTCTCCAGC  163

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information