BAC Information

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BAC

Clone NameB6Ng01-256P11
Chromosome15 (Build37)
Map Location 52,228,731 - 52,229,869
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039662, Eif3s3, LOC100039679, D530033C11Rik, Rad21, Aard, LOC100039720, LOC665219, Slc30a8
Downstream geneLOC100039748, Thrap6, LOC100039745, Ext1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256P11.bB6Ng01-256P11.g
ACCGA062790GA062791
length1,1921,125
definitionB6Ng01-256P11.b B6Ng01-256P11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggttcagaagcacctgaaaaatgt
tcagcatccttaatcatcagggaaatgcaaatcaaaataaccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaacttcaggtgagagca
gatgctggcaaagctgtggagaaagaagaacactcctcaattgttggtgg
gattgcaaatttgtacaaccactctggaaatcagtctggcggttcctcag
aagattggacattgtactactggaggatcctgcaataccgtcctgggcat
atatccagaagatgttccaattggtaagaaggacacatgctccactatgt
tcatagcagccttaattataataaccagaagctggaaagaacccagatgc
ccctcaacagaggaatggatacaaaaaatgtggttcatttacacaatgga
gttctactctgctattaaaaagaatgaatttttgaaattcctaggcaaat
ggttggacctggaaggcatcatcctgagttaggtaacccaatcacaaaag
aactcaaatgatatatactcactgataagtggatattatctcagaaactt
agaatacccaagatataagatacaatttgtgaaacccatgaaactcaaga
agaatgaagaccaaagtgtggactctttgccccttcttagaattgggaac
aaaacacccatggaaggagttacaaagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccatcccataatca
gcctccaaatgctgacaccattgcatacactagcaagattttgctgaaag
gaccctgatatagctgtctcttgtgagactatgcccggggcctagcaaac
acagaagtggatgctcacagtcagctattggatggatcacagggccccca
tgggtggacctagagaaagtacccaaggagctaaagggatctgcaatggt
atagttggaacacatatgaactaccagtaccccatagcttcttgttctct
agctgcatatgtagcaaagatggcttagtcagcatcactgaaagagaagg
cctttggttcatgccaacttccatattgcctcagtacaggaacgtcaagc
ttaaaacttggcattggggtgtgtaaggggaatatccctact
gaattcaaatcagaaagacacagcccttgctctcatgaagcaagtacact
gaatatcttttgctcttgagaaactaagaacccaaccttgaatggagaca
aaaaagaaatatgaatggccatttggaattctggacataaaatatatgca
tcacctattttatgcagacatgctcgtacgtggctgcataaaatggggct
ttttattattcttttatggatcgaccatagactatgcaatacaagtggga
cataaaaagaaaaatggaaaagacgagatctgactaaataaatcccttga
aagccttttgttaaaaaaaaaaaaatactccaccatgagaataaattccc
cttaccctgttattttgctactgtttttttttctaggtcaccagaaatga
aaatatattagaaaatatattaaaagattggcacatgcatgaaaaatcct
tgcaagacctctgagttaacactatacgtttacaaaccaaaaggaaatac
ccaaaatgatccattgtaagaagggcgctaagcatccctgcgagaccaca
aggtcctttcccatttgtgtagtctgctagctgtgacagtaataagaaac
tgaagtcaaaaaaattgtgaggcagtttttactgatagctttcagattgt
aatcaaggacattgttaacacataataagtgtgagatgatcctcatgata
aagaaatgaaggatgttctacaaataaataaaatagggagctgaggcaat
gtaatatttactgtaaaagttaagcatatataggaaacaacaggctacag
atgtgttatagccctaatatgatataaaaatagctcctttttcttagaaa
tttccaagccaaaggcgatgatagatgaatgattgggaagtggaatcaga
acatccaatgataaaaatgagatatgattctgtgagatttaatttagatt
agttcacttagaaaaagtaataaatttgaatgtactcaacacagctcaca
tttgaaatgactatcagaatcccaagaaactgagttagccatatttaatc
tgcagcactcaccaaggtgccaaccttaatacaggcatctttgcaatact
tcgacgcacgggacagtagtatatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_52228731_52229869
seq2: B6Ng01-256P11.g_66_1190 (reverse)

seq1  GATATACTACTTGTCTCGTTCTTGTCCAAATTATTTGCAAAGATG-CTGT  49
      |||||||||| |||| ||| |  ||| || |   ||||||||||| ||||
seq2  GATATACTAC-TGTCCCGTGC--GTCGAAGT--ATTGCAAAGATGCCTGT  45

seq1  AATTTAGTGTGGGCAACCTGGGTGAGTGCTGCAGATAAAATTATGGCTTA  99
      |  |||  || ||| |||| |||||||||||||||| ||| ||||||| |
seq2  A--TTAAGGTTGGC-ACCTTGGTGAGTGCTGCAGATTAAA-TATGGCTAA  91

seq1  CTCAAGGTTTCCTTTGGGAATTCTGATAAGTCATTTCAAATGTGAGCTGT  149
      ||||  |||||  ||||| |||||||| ||||||||||||||||||||||
seq2  CTCA--GTTTC--TTGGG-ATTCTGAT-AGTCATTTCAAATGTGAGCTGT  135

seq1  GTTGAGTACATTTCAATTTATTACTTTTTCTAAGTGAACTAATCTAAATT  199
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  GTTGAGTACATTCAAATTTATTACTTTTTCTAAGTGAACTAATCTAAATT  185

seq1  AAAATCTCACAGAATCAATATCTCATTTTTATCATTGGATGTTCTGATTC  249
       ||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  -AAATCTCACAGAATC-ATATCTCATTTTTATCATTGGATGTTCTGATTC  233

seq1  CACTTCCCAATCATTCATCTATCATCGCCTTTGGCTTGGAAATTTCTAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCCAATCATTCATCTATCATCGCCTTTGGCTTGGAAATTTCTAAG  283

seq1  -AAAAGGAGCTA-TTTTATATCATATTAGGGCTATAACACATCTGTAGCC  347
       ||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGAGCTATTTTTATATCATATTAGGGCTATAACACATCTGTAGCC  333

seq1  TGTTGTTTCCTATATATGCTTAACTTTTACAGTAAATATTACATTGCCTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTTCCTATATATGCTTAACTTTTACAGTAAATATTACATTGCCTC  383

seq1  AGCTCCCTATTTTATTTATTTGTAGAACATCCTTCATTTCTTTATCATGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCCTATTTTATTTATTTGTAGAACATCCTTCATTTCTTTATCATGA  433

seq1  GGATCATCTCACACTTATTATGTGTTAACAATGTCCTTGATTACAATCTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCATCTCACACTTATTATGTGTTAACAATGTCCTTGATTACAATCTG  483

seq1  AAAGCTATCAGTAAAAACTGCCTCACAATTTTTTTGACTTCAGTTTCTTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTATCAGTAAAAACTGCCTCACAATTTTTTTGACTTCAGTTTCTTA  533

seq1  TTACTGTCACAGCTAGCAGACTACACAAATGGGAAAGGACCTTGTGGTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTCACAGCTAGCAGACTACACAAATGGGAAAGGACCTTGTGGTCT  583

seq1  CGCAGGGATGCTTAGCGCCCTTCTTACAATGGATCATTTTGGGTATTTCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGGATGCTTAGCGCCCTTCTTACAATGGATCATTTTGGGTATTTCC  633

seq1  TTTTGGTTTGTAAACGTATAGTGTTAACTCAGAGGTCTTGCAAGGATTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTTGTAAACGTATAGTGTTAACTCAGAGGTCTTGCAAGGATTTT  683

seq1  TCATGCATGTGCCAATCTTTTAATATATTTTCTAATATATTTTCATTTCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCATGTGCCAATCTTTTAATATATTTTCTAATATATTTTCATTTCT  733

seq1  GGTGACCTAGAAAAAAAAACAGTAGCAAAATAACAGGGTAAGGGGAATTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACCTAGAAAAAAAAACAGTAGCAAAATAACAGGGTAAGGGGAATTT  783

seq1  ATTCTCATGGTGGAGTATTTTTTTTTTTTTAACAAAAGGCTTTCAAGGGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCATGGTGGAGTATTTTTTTTTTTTTAACAAAAGGCTTTCAAGGGA  833

seq1  TTTATTTAGTCAGATCTCGTCTTTTCCATTTTTCTTTTTATGTCCCACTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAGTCAGATCTCGTCTTTTCCATTTTTCTTTTTATGTCCCACTT  883

seq1  GTATTGCATAGTCTATGGTCGATCCATAAAAGAATAATAAAAAGCCCCAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGCATAGTCTATGGTCGATCCATAAAAGAATAATAAAAAGCCCCAT  933

seq1  TTTATGCAGCCACGTACGAGCATGTCTGCATAAAATAGGTGATGCATATA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCAGCCACGTACGAGCATGTCTGCATAAAATAGGTGATGCATATA  983

seq1  TTTTATGTCCAGAATTCCAAATGGCCATTCATATTTCTTTTTTGTCTCCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTCCAGAATTCCAAATGGCCATTCATATTTCTTTTTTGTCTCCA  1033

seq1  TTCAAGGTTGGGTTCTTAGTTTCTCAAGAGCAAAAGATATTCAGTGTACT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGTTGGGTTCTTAGTTTCTCAAGAGCAAAAGATATTCAGTGTACT  1083

seq1  TGCTTCATGAGAGCAAGGGCTGTGTCTTTCTGATTTGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCATGAGAGCAAGGGCTGTGTCTTTCTGATTTGAATTC  1125