BAC Information

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BAC

Clone NameB6Ng01-257A16
Chromosome15 (Build37)
Map Location 42,126,217 - 42,127,377
singlet/doubletsinglet
Overlap genenone
Upstream geneOxr1, Abra, EG432946, LOC432947
Downstream geneLOC100039268, LOC100039197, Angpt1, Rspo2, LOC675960, Eif3s6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257A16.bB6Ng01-257A16.g
ACCGA062841GA062842
length1,1731,206
definitionB6Ng01-257A16.b B6Ng01-257A16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagttcaggaatcacactggtttcaagaacaactcgaaaaggaa
tttcaaagaggagtgaatgttgtgtctcatgtctttatgtttctgagtgt
ctttgtctttcactcctctctggtttcctccccttctgtggaccacatgg
aggaagcttggatgattaatatcccccaaggattataagtggagccattc
aagaaggaaaattgtccatttacatgatgaatcctgctccttgatgaaaa
gtctcacatgttcactagctgaagagtccaggaagacatttgccatgatt
gtgttgacagaaggggtgagtggtaacaacaacaacaaaaaatgtagttc
cttaggaaggattttgtgggtggccatgtgttgcaagatttccttcccta
gggaaacataagcaatctctaccctcttctcattaggttccaatgtcaaa
gtacaattccatcagcattcgctgtggaggatgaatgagtttatttgagt
tatttaccaaaaatagttgaagaattccaggaaggagtgtgggtgacccc
aacgcagccacattaaagagtcttcatccaccattgattatggcttccca
tagagcctctttcaactaaactctcaaaaatatgcacacttcagaggacc
tgatgctcatgtgctacttgggtagaagtgtaagcaaattgtgtgggggt
aaaaaagtagatgagggttcagtgactctattattctctccctctgagtg
aatttcaacaaacaatagcaccattcctgatgacctcttgcaaggaggca
agctgatctgatgatgatgatggttgctgattttcttggaggactatgtt
ctacaatgccatgagaatcatgaaacttgtccatctcttccgtgaggacg
gctcttacgttgaggagttatatcctcatatatgtggtcagagtgcagag
cttccatcttcttgagtacttgtgtgaagattcctgcagtagcatagatg
gaagccatcttaaccagggcctggaacctcttgcagtaatttttttaaat
gagtaccactgctattgtttcatgcaacaagtacaattgctcatggtaaa
tcatatgaaccaaaggatatccttttccttcctcctgaatgttttggata
gaacctctcagcaccacaacaca

gaattctttgtttagctctgtgccccattatttaatagggttatttgatt
ttctgaagtccaacttcttgagttctttatatatattggatattagtccc
gtatctgatttaggaatggtataaatactttcccaatctgttggtggcct
ttttgtcttattgacagtgtcatttgccttacagaagctttgcaatttta
tgaggtcccacttgttgattcttgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggctcttccccac
tttctcctatataagtttcagtgtctctggttttatgtggagttctttga
tctacttagacttgagctttgtacaaggagataacaatggatctatttac
atttttctacaagataacctctagttatcgtgtagataactagataataa
tagataatagttgtgccagcactatttgttgaaaatgctgtctttttttc
cactagatggttttagtttccttttcaaagattaagtgaccataggtgtg
tggattcatttctgggtcttcagtagtattccattgatctacctgtctgt
cattataccagtaccatgcagtttttatcacaattgctctttagtacagc
tttaggtcaggcatggtgattctgccagaggttcttttatttttgagaat
agtttttgctatccaaggttttttgttattccagatgaattttcaaattg
ccctttctaacttggtgaagaattgaattggaattttaatggggattgca
tcgaatctgtttaggagttctctggtggaatttttagggtcacttatata
tactatcatatcatctgcaattagtgatattttgacttcttttttcaatt
tgtatcccctcgatcttcttttgttgtctgattgttctggctagaacttc
aagaactaaattgaataggtaggggagaaatgagcagccttgtctagtcc
tgattagtggtgattattcaagtttctctccatttaggtttgatgtgtac
tgggttttctgtatattgctttttattacgtttaatttatgggccttgac
ttcttattcttccagactttatcatgaactgggcgttggaattgtgtcaa
tgccttttcctcagacacctaacagaaagtattcaaggtgtggtctgtgc
tctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_42126217_42127377
seq2: B6Ng01-257A16.b_43_1215 (reverse)

seq1  TGTGTTGTGGTGCTGAGAG--TCTATC--AAACA-TCAGGAGGAAAGAAA  45
      |||||||||||||||||||  ||||||  ||||| |||||||||| ||||
seq2  TGTGTTGTGGTGCTGAGAGGTTCTATCCAAAACATTCAGGAGGAAGGAAA  50

seq1  AGGATA--CTTTGG-TCATATGA-TTACCATGAGCAATTGTACTGGTTGC  91
      ||||||  |||||| |||||||| |||||||||||||||||||| |||||
seq2  AGGATATCCTTTGGTTCATATGATTTACCATGAGCAATTGTACTTGTTGC  100

seq1  ATG-AACAATAGCAGTGGTACTCATTTAAAAAAA-TACTGCAAGAGGTTC  139
      ||| |||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATGAAACAATAGCAGTGGTACTCATTTAAAAAAATTACTGCAAGAGGTTC  150

seq1  CAGG-CCTGGTTAAGATGGC-TCCATCTATGCTACCTGCAGGAATCTTCA  187
      |||| ||||||||||||||| ||||||||||||| |||||||||||||||
seq2  CAGGCCCTGGTTAAGATGGCTTCCATCTATGCTA-CTGCAGGAATCTTCA  199

seq1  CACAAGTACTCAAGAAGATGGAAGCTCTGCACTCTGACCACATATATGAG  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTACTCAAGAAGATGGAAGCTCTGCACTCTGACCACATATATGAG  249

seq1  GATATAACTCCTCAACGTAAGAGCCGTCCTCACGGAAGAGATGGACAAGT  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAACTCCTCAACGTAAGAGCCGTCCTCACGGAAGAGATGGACAAGT  299

seq1  TTCATGATTCTCATGGCATTGTAGAACATAGTCCTCCAAGAAAATCAGCA  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGATTCTCATGGCATTGTAGAACATAGTCCTCCAAGAAAATCAGCA  349

seq1  ACCATCATCATCATCAGATCAGCTTGCCTCCTTGCAAGAGGTCATCAGGA  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCATCATCATCAGATCAGCTTGCCTCCTTGCAAGAGGTCATCAGGA  399

seq1  ATGGTGCTATTGTTTGTTGAAATTCACTCAGAGGGAGAGAATAATAGAGT  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGCTATTGTTTGTTGAAATTCACTCAGAGGGAGAGAATAATAGAGT  449

seq1  CACTGAACCCTCATCTACTTTTTTACCCCCACACAATTTGCTTACACTTC  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAACCCTCATCTACTTTTTTACCCCCACACAATTTGCTTACACTTC  499

seq1  TACCCAAGTAGCACATGAGCATCAGGTCCTCTGAAGTGTGCATATTTTTG  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAAGTAGCACATGAGCATCAGGTCCTCTGAAGTGTGCATATTTTTG  549

seq1  AGAGTTTAGTTGAAAGAGGCTCTATGGGAAGCCATAATCAATGGTGGATG  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTAGTTGAAAGAGGCTCTATGGGAAGCCATAATCAATGGTGGATG  599

seq1  AAGACTCTTTAATGTGGCTGCGTTGGGGTCACCCACACTCCTTCCTGGAA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCTTTAATGTGGCTGCGTTGGGGTCACCCACACTCCTTCCTGGAA  649

seq1  TTCTTCAACTATTTTTGGTAAATAACTCAAATAAACTCATTCATCCTCCA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAACTATTTTTGGTAAATAACTCAAATAAACTCATTCATCCTCCA  699

seq1  CAGCGAATGCTGATGGAATTGTACTTTGACATTGGAACCTAATGAGAAGA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGAATGCTGATGGAATTGTACTTTGACATTGGAACCTAATGAGAAGA  749

seq1  GGGTAGAGATTGCTTATGTTTCCCTAGGGAAGGAAATCTTGCAACACATG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGAGATTGCTTATGTTTCCCTAGGGAAGGAAATCTTGCAACACATG  799

seq1  GCCACCCACAAAATCCTTCCTAAGGAACTACATTTTTTGTTGTTGTTGTT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCCACAAAATCCTTCCTAAGGAACTACATTTTTTGTTGTTGTTGTT  849

seq1  ACCACTCACCCCTTCTGTCAACACAATCATGGCAAATGTCTTCCTGGACT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTCACCCCTTCTGTCAACACAATCATGGCAAATGTCTTCCTGGACT  899

seq1  CTTCAGCTAGTGAACATGTGAGACTTTTCATCAAGGAGCAGGATTCATCA  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCTAGTGAACATGTGAGACTTTTCATCAAGGAGCAGGATTCATCA  949

seq1  TGTAAATGGACAATTTTCCTTCTTGAATGGCTCCACTTATAATCCTTGGG  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATGGACAATTTTCCTTCTTGAATGGCTCCACTTATAATCCTTGGG  999

seq1  GGATATTAATCATCCAAGCTTCCTCCATGTGGTCCACAGAAGGGGAGGAA  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTAATCATCCAAGCTTCCTCCATGTGGTCCACAGAAGGGGAGGAA  1049

seq1  ACCAGAGAGGAGTGAAAGACAAAGACACTCAGAAACATAAAGACATGAGA  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGAGGAGTGAAAGACAAAGACACTCAGAAACATAAAGACATGAGA  1099

seq1  CACAACATTCACTCCTCTTTGAAATTCCTTTTCGAGTTGTTCTTGAAACC  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACATTCACTCCTCTTTGAAATTCCTTTTCGAGTTGTTCTTGAAACC  1149

seq1  AGTGTGATTCCTGAACTTGAATTC  1161
      ||||||||||||||||||||||||
seq2  AGTGTGATTCCTGAACTTGAATTC  1173


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