BAC Information

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BAC

Clone NameB6Ng01-257G10
Chromosome15 (Build37)
Map Location 34,645,321 - 34,646,472
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675463, Mtdh, Laptm4b, Matn2, Rpl30, BC030476, Hrsp12, Pop1, Npal2
Downstream geneKcns2, Stk3, Osr2, Vps13b, EG666183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257G10.bB6Ng01-257G10.g
ACCGA063111GA063112
length1,0431,152
definitionB6Ng01-257G10.b B6Ng01-257G10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatactaaaaccatctggtcctgggctttatttggttgggaaac
ttttaatggatgcttctacttctttaggcattatgggactgtttagatgg
tttatctgatcctgatttaactttggtaatttgctatctgtctagaaaat
tgtccatttcatccagattttcaagttttgttgagtatagggttttgtag
taggatctgatgatttttaaaatttcctcagtttctgttgttattttgtt
atttggatactgtatctgtgccctctgtttagtctggctaatgggttatc
tctctttttggttttctcaacaaaacaaaacaaaagaaaacaaaacaaac
aaaagaaaacagttcctgtttttgttgattctttgtatagttctttttgt
ttctacttggtggatttcagcaagtgtttgattatttcctatcatctact
cctcttgggtgaatttgcttctttctgttctagagttttcaggtgtgctg
ttaagctgctagtggatgctctctcaagtttcttttgggggacactcaaa
ctgatgagtttttctcttagcactgctttcattgtgtcccatacttgggt
atgttgtgccttcattttcattaaattctaaaaagtctttaatttctttc
tttcttttttcgttgaccaagttatcatagagtagaacattgtttcagct
tccatgtatatgtgggctttctgttgtttttgtttactattgaaggtcag
ccttagtccatggtgatctgataggctgaatgtgattatttcaatcatct
ttatctctgttgaggccttcttttgtgactgatcatatggtcagtttttg
gagaagtacccattgaggtgcttgattaaaaaaggcatattcttttgttt
taggatgaaatgttcctatagctaacttattaaaatccatttgggtccat
taactttcttgttagttttactgggtcttctgtttagttgtggtttctgt
ggttcctgctcactgatgagagtggggatgttggaagtcttcc
gaattcctattacgtgtcaggcattgagaggatgacagtggcaagatgag
gactctgctgtcagggagtgcagaaatgtgagttgccccttccctgtctt
ctctctgaatttatagcaaaggctaagagatggtgagccagcgagtggct
atctagatgcctgcctcatagcatttctgctttgcttcaaatggtggcca
ccactttagctctcctttaaagaagacagaactaactgccttactaagtt
attgaggttacagagcctcataatctgtcatctgcagatttaaactgatg
gctggagaaccagaggcactaaagacagaaatgattttgttccagctcaa
gtagtcaggcagaaagtctgcttccagtctattctaatcagattctcagg
aaatcaggtgtgtgctgcccccaagattatggagggggcatgctttttct
ttattcagtctgctaattcaaaccctaacatcttccagatgcactactgt
agatacaccctgaaagacggtggtccactctgagcatcctcaagtccagt
caagttacacataaaattaaccaccacgtatagcaagtattatacttggt
gttaatctaggttaaatattttatatatgcacacacatatatgtacacaa
tgctggtccatgcacattaatcaatagataacatttattattgttggttc
tattatttttgtatcaatactgagataatctattgagataataatcttgg
gtcctaacaaccaagagccagagacggatactgaatcagtaatgttatgg
tgaagataaactttggtaagaaaagttttcagaaatgagaagagaatctc
tttttattgagccaggatgactgaaggtaaggaagccagtcaacttgctt
ggaaatatgagcagattcagaaaaatgagtatatgatgaagaattatttc
ataggttccaaactcctgtatataatgagtatactaacaacttttaaaaa
aataattgcttaatttcccacaataaatataattgtgttttgggtatata
taaatatcaatctatttccaggctcacttacccatcatcccctcaaccca
acctcatatggctctttaaaccactgattcaattaagcttgcagcatgtg
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_34645321_34646472
seq2: B6Ng01-257G10.g_68_1219 (reverse)

seq1  TGCACATGCTGGCCACGCTAAATGAATTCAGTGGGTTTTAAAAAGAGCAT  50
      |||||||||||  || ||| |||  | |||||||  |||||| ||  |||
seq2  TGCACATGCTG--CAAGCTTAATTGAATCAGTGG--TTTAAAGAG-CCAT  45

seq1  ATGAAGTTGGGGTTGAGGGGGAATGATGGGGTAAGTGAG-CTGG-AATAG  98
      |||| ||| |||||||||||  ||||| ||||||||||| |||| |||||
seq2  ATGAGGTT-GGGTTGAGGGG--ATGAT-GGGTAAGTGAGCCTGGAAATAG  91

seq1  ATTTGATATTTATAATATACC--AAACACAA-TATATTTA-TGTGGGAAA  144
      | ||||||||||| |||||||  |||||||| |||||||| |||||||||
seq2  A-TTGATATTTAT-ATATACCCAAAACACAATTATATTTATTGTGGGAAA  139

seq1  TTAAGCAAT--ATTTTTTAAAAGTTGTTAGTATACTCATTATATACAGGA  192
      |||||||||   ||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCAATTATTTTTTTAAAAGTTGTTAGTATACTCATTATATACAGGA  189

seq1  GTTTGGAACCTATGAAATAATTC-TCATCATATACTCATTTTTCTGAATC  241
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTTTGGAACCTATGAAATAATTCTTCATCATATACTCATTTTTCTGAATC  239

seq1  TGCTCATATTTCCAAGCAAGTTGACTGGCTTCCTTACCTTCAGTCATCCT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATATTTCCAAGCAAGTTGACTGGCTTCCTTACCTTCAGTCATCCT  289

seq1  GGCTCAATAAAAAGAGATTCTCTTCTCA-TTCTG-AAACTTTTCTTACCA  339
      |||||||||||||||||||||||||||| ||||| |||||||||||||||
seq2  GGCTCAATAAAAAGAGATTCTCTTCTCATTTCTGAAAACTTTTCTTACCA  339

seq1  AAGTTTATCTTCACCATAACATTACTGATTCAGTATCCGTCTCTGGCTCT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTATCTTCACCATAACATTACTGATTCAGTATCCGTCTCTGGCTCT  389

seq1  TGGTTGTTAGGACCCAAGATTATTATCTCAATAGATTATCTCAGTATTGA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTTAGGACCCAAGATTATTATCTCAATAGATTATCTCAGTATTGA  439

seq1  TACAAAAATAATAGAACCAACAATAATAAATGTTATCTATTGATTAATGT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAATAATAGAACCAACAATAATAAATGTTATCTATTGATTAATGT  489

seq1  GCATGGACCAGCATTGTGTACATATATGTGTGTGCATATATAAAATATTT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGACCAGCATTGTGTACATATATGTGTGTGCATATATAAAATATTT  539

seq1  AACCTAGATTAACACCAAGTATAATACTTGCTATACGTGGTGGTTAATTT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGATTAACACCAAGTATAATACTTGCTATACGTGGTGGTTAATTT  589

seq1  TATGTGTAACTTGACTGGACTTGAGGATGCTCAGAGTGGACCACCGTCTT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTAACTTGACTGGACTTGAGGATGCTCAGAGTGGACCACCGTCTT  639

seq1  TCAGGGTGTATCTACAGTAGTGCATCTGGAAGATGTTAGGGTTTGAATTA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTGTATCTACAGTAGTGCATCTGGAAGATGTTAGGGTTTGAATTA  689

seq1  GCAGACTGAATAAAGAAAAAGCATGCCCCCTCCATAATCTTGGGGGCAGC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACTGAATAAAGAAAAAGCATGCCCCCTCCATAATCTTGGGGGCAGC  739

seq1  ACACACCTGATTTCCTGAGAATCTGATTAGAATAGACTGGAAGCAGACTT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCTGATTTCCTGAGAATCTGATTAGAATAGACTGGAAGCAGACTT  789

seq1  TCTGCCTGACTACTTGAGCTGGAACAAAATCATTTCTGTCTTTAGTGCCT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTGACTACTTGAGCTGGAACAAAATCATTTCTGTCTTTAGTGCCT  839

seq1  CTGGTTCTCCAGCCATCAGTTTAAATCTGCAGATGACAGATTATGAGGCT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTCTCCAGCCATCAGTTTAAATCTGCAGATGACAGATTATGAGGCT  889

seq1  CTGTAACCTCAATAACTTAGTAAGGCAGTTAGTTCTGTCTTCTTTAAAGG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACCTCAATAACTTAGTAAGGCAGTTAGTTCTGTCTTCTTTAAAGG  939

seq1  AGAGCTAAAGTGGTGGCCACCATTTGAAGCAAAGCAGAAATGCTATGAGG  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTAAAGTGGTGGCCACCATTTGAAGCAAAGCAGAAATGCTATGAGG  989

seq1  CAGGCATCTAGATAGCCACTCGCTGGCTCACCATCTCTTAGCCTTTGCTA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATCTAGATAGCCACTCGCTGGCTCACCATCTCTTAGCCTTTGCTA  1039

seq1  TAAATTCAGAGAGAAGACAGGGAAGGGGCAACTCACATTTCTGCACTCCC  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCAGAGAGAAGACAGGGAAGGGGCAACTCACATTTCTGCACTCCC  1089

seq1  TGACAGCAGAGTCCTCATCTTGCCACTGTCATCCTCTCAATGCCTGACAC  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCAGAGTCCTCATCTTGCCACTGTCATCCTCTCAATGCCTGACAC  1139

seq1  GTAATAGGAATTC  1152
      |||||||||||||
seq2  GTAATAGGAATTC  1152