BAC Information

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BAC

Clone NameB6Ng01-258E12
Chromosome15 (Build37)
Map Location 101,257,952 - 101,258,765
singlet/doubletsinglet
Overlap geneKrt7
Upstream geneEG432982, Letmd1, BC035295, Tcfcp2, Pou6f1, Dazap2, BC004728, Bin2, Ela1, Galnt6, Slc4a8, Scn8a, EG668225, Ankrd33, Acvrl1, Acvr1b, Grasp, Nr4a1, 9430023L20Rik, 6030408B16Rik, Krt80
Downstream geneKrt85, Krt83, 1700011A15Rik, 5430421N21Rik, EG574415, Krt84, Krt82, 4732456N10Rik, Krt75, EG432985, EG432986, EG406223, EG432987, Krt6b, Krt6a, Krt5, Krt71, Krt74, Krt72, Krt73, Krt2, LOC100043001, Krt1, Krt77, Krt76, Krt4, Krt79, Krt78, Krt8, Krt18, LOC676882, Eif4b, Tenc1, Spryd3, Igfbp6, Soat2, Csad, Zfp740, Itgb7, Rarg, D15Mgi27, Espl1, Pfdn5, Myg1, Aaas, Sp7, Sp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258E12.bB6Ng01-258E12.g
ACCGA063761GA063762
length814997
definitionB6Ng01-258E12.b B6Ng01-258E12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccactgggggcaatggtggcaagcttatcttcggaggaaccatgg
gaagcaatgctctgagcttcagtgggggacccggagccctcagggcctat
tccatcaagaccacatctactacccgcaggggcacccacaattgagcaca
tacaaccaagctgtgggcttggagagaccccccatacccttttgtccatc
tcatgtccctgtcccgagcctggaagatagtctgaaactgctgttggctt
taataaagggcctctctgagagagctgcatcggctagctaggagtggtac
tcacagggaacagagcgggtagtgtgctcaggactggggttcagactgac
atgggtatggctttaaggtgctggacccccatccatggtgccaccttggc
tcttatccaggctggagctggttccagtgcctctcctgagatcatttaat
atggccactggatacaggaggttgtggtaacaggtggatgttgaagacct
ttttcctttcagggagggtctacttgcacctccacaccctctgttgacag
cctatggtcttgaagtgagatcacacacattcagctctccaaggccctgg
gctttggtggcccagcaaactccccaagacacccacagtcagcccttcct
gaggtctgggactttgtgttctgatacttacaagaggtcctgtcctttgc
ctcgagattctttggggatgatggtcgtggagggagatatgactataaga
gaggttccctagagcctaggctgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgttgaggaaagt
gaattctctactgaggaatgctgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaagcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaatttcaggtgctggc
gagaatgtggagaaagaggaacactcctccactgctggtgggattgcaag
cttgtacaaccactctggaagtcagtctgaaggttctcagaaaattggac
ataatactaccggaagatccaacaaatatctctcctgggcatatatatat
acccaggagaagttccaactggtaataagaacacatgctccactatgttt
catagaagccttatttataatagccagaagctgaaaagaacccagatgtc
cctcaacagaagaatggatacagaaaatgtggtacacaatggagtactac
tcagctattaaaaacaatggatttatgaaattcttggacaaatggatgta
tctggaggatatcatccttagtgaggtaacccaatcacaaaagaagtcat
tagatatgcactcactgataagtggatattagcccagaatcatagaacac
ccaagatacaatttgcaaaacacaagaaaatcaagaagagggaagaccaa
tgagtggatacttcattcctccttagaatagggaacaaaatacccatgaa
aggagttacagagacaaagtttggagctaagatgaaaggatggactatct
agagactaccccatccggggatccatcccataatcagccaccaaacccag
acaccattgcatatgccagaaagattttgctgaaggaaccctgttatagc
tgtctcatatgaggctgtgccagtgcctggcaaatacagaagtggatgct
cacagtcatcttataagatggaacacagggcccccatggagaagctagag
aagcacccaaggagctgaaaggggtcttgcaaccctataggtggaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_101257952_101258765
seq2: B6Ng01-258E12.b_45_858

seq1  GAATTCCACTGGGGGCAATGGTGGCAAGCTTATCTTCGGAGGAACCATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTGGGGGCAATGGTGGCAAGCTTATCTTCGGAGGAACCATGG  50

seq1  GAAGCAATGCTCTGAGCTTCAGTGGGGGACCCGGAGCCCTCAGGGCCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAATGCTCTGAGCTTCAGTGGGGGACCCGGAGCCCTCAGGGCCTAT  100

seq1  TCCATCAAGACCACATCTACTACCCGCAGGGGCACCCACAATTGAGCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCAAGACCACATCTACTACCCGCAGGGGCACCCACAATTGAGCACA  150

seq1  TACAACCAAGCTGTGGGCTTGGAGAGACCCCCCATACCCTTTTGTCCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCAAGCTGTGGGCTTGGAGAGACCCCCCATACCCTTTTGTCCATC  200

seq1  TCATGTCCCTGTCCCGAGCCTGGAAGATAGTCTGAAACTGCTGTTGGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCCCTGTCCCGAGCCTGGAAGATAGTCTGAAACTGCTGTTGGCTT  250

seq1  TAATAAAGGGCCTCTCTGAGAGAGCTGCATCGGCTAGCTAGGAGTGGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAGGGCCTCTCTGAGAGAGCTGCATCGGCTAGCTAGGAGTGGTAC  300

seq1  TCACAGGGAACAGAGCGGGTAGTGTGCTCAGGACTGGGGTTCAGACTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGGAACAGAGCGGGTAGTGTGCTCAGGACTGGGGTTCAGACTGAC  350

seq1  ATGGGTATGGCTTTAAGGTGCTGGACCCCCATCCATGGTGCCACCTTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTATGGCTTTAAGGTGCTGGACCCCCATCCATGGTGCCACCTTGGC  400

seq1  TCTTATCCAGGCTGGAGCTGGTTCCAGTGCCTCTCCTGAGATCATTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCCAGGCTGGAGCTGGTTCCAGTGCCTCTCCTGAGATCATTTAAT  450

seq1  ATGGCCACTGGATACAGGAGGTTGTGGTAACAGGTGGATGTTGAAGACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCACTGGATACAGGAGGTTGTGGTAACAGGTGGATGTTGAAGACCT  500

seq1  TTTTCCTTTCAGGGAGGGTCTACTTGCACCTCCACACCCTCTGTTGACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTTCAGGGAGGGTCTACTTGCACCTCCACACCCTCTGTTGACAG  550

seq1  CCTATGGTCTTGAAGTGAGATCACACACATTCAGCTCTCCAAGGCCCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGGTCTTGAAGTGAGATCACACACATTCAGCTCTCCAAGGCCCTGG  600

seq1  GCTTTGGTGGCCCAGCAAACTCCCCAAGACACCCACAGTCAGCCCTTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGTGGCCCAGCAAACTCCCCAAGACACCCACAGTCAGCCCTTCCT  650

seq1  GAGGTCTGGGACTTTGTGTTCTGATACTTACAAGAGGTCCTGTCCTTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTGGGACTTTGTGTTCTGATACTTACAAGAGGTCCTGTCCTTTGC  700

seq1  CTCGAGATTCTTTGGGGATGATGGTCGTGGAGGGAGATATGACTATAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAGATTCTTTGGGGATGATGGTCGTGGAGGGAGATATGACTATAAGA  750

seq1  GAGGTTCCCTAGAGCCTAGGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTCCCTAGAGCCTAGGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  800

seq1  GTGTTGAGGAAGGT  814
      ||||||||||| ||
seq2  GTGTTGAGGAAAGT  814