BAC Information

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BAC

Clone NameB6Ng01-259E24
Chromosome15 (Build37)
Map Location 26,248,849 - 26,334,168
singlet/doubletdoublet
Overlap genenone
Upstream gene4930445E18Rik, Basp1, EG432939, LOC100040583, Myo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622, AK162044
Downstream geneFbxl7, LOC622531, LOC625311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259E24.bB6Ng01-259E24.g
ACCGA064524GA064525
length581775
definitionB6Ng01-259E24.b B6Ng01-259E24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,333,582 - 26,334,168)(26,248,849 - 26,249,620)
sequence
ataatgatgaactgagtaggtctgagtcctaaaatccaatcacattccca
gagccttgcctctgaatacagcaccaggacctaaaaaccttcatttcaac
acgagtcttcatgtaacaatccataccaaaataatagtggtcaaaaaccc
acgtccctgcccacacctatctacttcatggggagaaggatctcagagtc
ttcttggaaggcatgagttgtgaagactttgcctagttattggataagtt
atactcctctctcctttcccaggaagttcacacatcaaaaagagacatcc
ctgagcacaatcctgctctgctcaacttaaatgccattgggaaaggctgg
caagtggagcagagctctggcccaagtgaattttgattgagattccctaa
aatttctccttttcaattctcctttttttctttgccaagatgtcaccagc
ccagtatgtgtgcatgtgcagtgtatagttacaagcatgaatatgtgttc
aaatgctgtaagtggtaaagacagggtatgcaggtatgtacctggtcctc
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

gaattctttcagttttcttagggtttctagagtagggcaggaacagtgat
gactggaacaagctttagatcaaatcacagaacacagcacaacattgctt
atttggtcagtctgtgaccattcgatgagtattggtgatatgaatgagtg
agtgggcgagcatttttgaaatgctctagaatcatggaagttctgttatt
tctgctgtgagactctgccttaaggaattacaattgttttcatttcctga
atactggttttttgctcggtggctgctcgtttttcactttcttcttagat
ctactagcagtgagattcagaatatacctagactaatgagagagagagag
agagagagagagagagagagagagagagagagagagagagagagaaaaga
gagagaagagagaacaagcttccagtgaaatatatctactcttttaaaaa
cctaaaatgtcatggaaaaagacttagttagctgctatcagtaacacact
ttctttcttgagattgtcacagtttgaagagtttcacataacatctgctt
ggggaacttaaataattttgttggaaattttactatggctgcagaggagc
ctactggatataaattttttgctgtgaaatctgccacttgactgacaata
aggctacattatttgatgtgtggtttgtatcattataatgtaacttcaaa
gatgatgatttttggctggcggaactcccaccccagcacagggagctaca
acaaagagtgaacttcttttcctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_26333582_26334168
seq2: B6Ng01-259E24.b_48_634 (reverse)

seq1  CACACACACACACACACACACACACACACACGAGGACCAGGTACATACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACGAGGACCAGGTACATACCT  50

seq1  GCATACCCTGTCTTTACCACTTACAGCATTTGAACACATATTCATGCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACCCTGTCTTTACCACTTACAGCATTTGAACACATATTCATGCTTG  100

seq1  TAACTATACACTGCACATGCACACATACTGGGCTGGTGACATCTTGGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATACACTGCACATGCACACATACTGGGCTGGTGACATCTTGGCAA  150

seq1  AGAAAAAAAGGAGAATTGAAAAGGAGAAATTTTAGGGAATCTCAATCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAAGGAGAATTGAAAAGGAGAAATTTTAGGGAATCTCAATCAAA  200

seq1  ATTCACTTGGGCCAGAGCTCTGCTCCACTTGCCAGCCTTTCCCAATGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTTGGGCCAGAGCTCTGCTCCACTTGCCAGCCTTTCCCAATGGCA  250

seq1  TTTAAGTTGAGCAGAGCAGGATTGTGCTCAGGGATGTCTCTTTTTGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTTGAGCAGAGCAGGATTGTGCTCAGGGATGTCTCTTTTTGATGT  300

seq1  GTGAACTTCCTGGGAAAGGAGAGAGGAGTATAACTTATCCAATAACTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACTTCCTGGGAAAGGAGAGAGGAGTATAACTTATCCAATAACTAGG  350

seq1  CAAAGTCTTCACAACTCATGCCTTCCAAGAAGACTCTGAGATCCTTCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCTTCACAACTCATGCCTTCCAAGAAGACTCTGAGATCCTTCTCC  400

seq1  CCATGAAGTAGATAGGTGTGGGCAGGGACGTGGGTTTTTGACCACTATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAAGTAGATAGGTGTGGGCAGGGACGTGGGTTTTTGACCACTATTA  450

seq1  TTTTGGTATGGATTGTTACATGAAGACTCGTGTTGAAATGAAGGTTTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTATGGATTGTTACATGAAGACTCGTGTTGAAATGAAGGTTTTTA  500

seq1  GGTCCTGGTGCTGTATTCAGAGGCAAGGCTCTGGGAATGTGATTGGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGGTGCTGTATTCAGAGGCAAGGCTCTGGGAATGTGATTGGATTT  550

seq1  TAGGACTCAGACCTACTCAGTTCATCATTATGAATTC  587
      |||||||||||||||||||||||||||||||||||||
seq2  TAGGACTCAGACCTACTCAGTTCATCATTATGAATTC  587


seq1: chr15_26248849_26249620
seq2: B6Ng01-259E24.g_66_840

seq1  GAATTCTTTCAGTTTTCTTAGGGTTTCTAGAGTAGGGCAGGAACAGTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGTTTTCTTAGGGTTTCTAGAGTAGGGCAGGAACAGTGAT  50

seq1  GACTGGAACAAGCTTTAGATCAAATCACAGAACACAGCACAACATTGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGAACAAGCTTTAGATCAAATCACAGAACACAGCACAACATTGCTT  100

seq1  ATTTGGTCAGTCTGTGACCATTCGATGAGTATTGGTGATATGAATGAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTCAGTCTGTGACCATTCGATGAGTATTGGTGATATGAATGAGTG  150

seq1  AGTGGGCGAGCATTTTTGAAATGCTCTAGAATCATGGAAGTTCTGTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGCGAGCATTTTTGAAATGCTCTAGAATCATGGAAGTTCTGTTATT  200

seq1  TCTGCTGTGAGACTCTGCCTTAAGGAATTACAATTGTTTTCATTTCCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGTGAGACTCTGCCTTAAGGAATTACAATTGTTTTCATTTCCTGA  250

seq1  ATACTGGTTTTTTGCTCGGTGGCTGCTCGTTTTTCACTTTCTTCTTAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGGTTTTTTGCTCGGTGGCTGCTCGTTTTTCACTTTCTTCTTAGAT  300

seq1  CTACTAGCAGTGAGATTCAGAATATACCTAGACTAATGAGAGAGAGAGAG  350
      |||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  CTACTAGCAGTGAGATTCAGAATATACCTAGACTAAT--GAGAGAGAGAG  348

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAA  398

seq1  GAGAGAGAAGAGAGAACAAGCTTCCAGTGAAATATATCTACTCTTTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAAGAGAGAACAAGCTTCCAGTGAAATATATCTACTCTTTTAAA  448

seq1  AACCTAAAATGTCATGGAAAAAGACTTAGTTAGCTGCTATCAGTAACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAAAATGTCATGGAAAAAGACTTAGTTAGCTGCTATCAGTAACACA  498

seq1  CTTTCTTTCTTGAGATTGTCACAGTTTGAAGAGTTTCACATAACATCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTGAGATTGTCACAGTTTGAAGAGTTTCACATAACATCTGC  548

seq1  TTGGGGAACTTAAATAA-TTTGTTGGAAATTTTACTATGGCTGCAGAGGA  599
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTGGGGAACTTAAATAATTTTGTTGGAAATTTTACTATGGCTGCAGAGGA  598

seq1  GCCTACTGGATATAAA-TTTTTGCTGTGAAATCTGCCACTTGACTGACAA  648
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GCCTACTGGATATAAATTTTTTGCTGTGAAATCTGCCACTTGACTGACAA  648

seq1  TAAGGCTACATTATTTGATGTGTGGTTTGTATCATTATAATGTAACTTCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCTACATTATTTGATGTGTGGTTTGTATCATTATAATGTAACTTCA  698

seq1  AAGATGATGATTTTTGGCTGGCGGAACT-CCACCCCAGCACAGGGAGCTA  747
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAGATGATGATTTTTGGCTGGCGGAACTCCCACCCCAGCACAGGGAGCTA  748

seq1  CAACAAAGAGTGAACT--CTTTCCTCC  772
      ||||||||||||||||   ||||||||
seq2  CAACAAAGAGTGAACTTCTTTTCCTCC  775


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