BAC Information

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BAC

Clone NameB6Ng01-259F22
Chromosome15 (Build37)
Map Location 64,965,690 - 64,966,854
singlet/doubletsinglet
Overlap genenone
Upstream geneDdef1, Adcy8, LOC268812
Downstream geneLOC100040790, LOC665836, C920006C10Rik, Oc90, F930104E18Rik, LOC100040835, Kcnq3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259F22.bB6Ng01-259F22.g
ACCGA064566GA064567
length1,1951,150
definitionB6Ng01-259F22.b B6Ng01-259F22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggttttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
cagatctttcacttccttcgttagagtcacgccgagatattttatattat
ttgtggctattgagaagggtgtgtttccctaatttctttctcagcctgtt
tatttctttgtgtagagaaaggccattgacttgttttgagttaatttata
tcagctacttccaccgaagctttgtttattcaagtttagaagttctctgt
tgaatttttaaggtcacttaaatatacctatcatatcaattgcaaagtga
atttagacttccctctttcaatgatatccccctggatatctctcc

gttggcatggtccatacatatatgtatgtggcagcatccactgaaatatg
ggcaagctaccaggatcagattctcctttctccagcagctaccaactgcc
aatagtacctcagctaggagcagggcttcatgagctccctcatactacat
gcttcctgaaggctagccataagcttaactcttttgttttaaatcttttc
ttaggttggaacccagcatggtcatgggcactgccagaaggaatggaaac
cttatgccaactaggaagttgatatttctttcaactttcctattgtgtca
gagaggagagcatgctcagtgatatcagacctcttatctcagcatcttca
caaacacatgtttgtgtttgctgaagatcctggtgtcccatacatatttt
ccatgtagacactttgctttaacaaactatcaaattttaataaatagaca
ataggtgcctttaatctttttttaaacaacagaaaatatttgtacatata
tatatacatatataatttacttatatacttatatgtatgtatatatattt
atatttatatatatgaaaggaaaatttatatacaaaaattaaatatccac
tcttaatataatagacaattatacagaaacattagcatggttgtgttaca
cagcatgggtgtttacatgtttgcatttacatggctagatttctgtagat
gataaacatctgcacagaaaaaaaatgtgcagagcagttcttttcatttc
tctgaacaattcctatctttccttctataagcagaagaaacaatggaatc
acttctattttggaagaactactctattttagagctttgtgatttggatt
tcaatgttataagaaattagggattatagggattaggtcaaactggcaaa
gcagtttaaaatgaaacaaggctgagtaaggattccccagcccagtgcta
gaagaatgtggttcctgttgcctatatcccaagtgtgattgccaagggac
tcagtttctggcttaaaagcttgtcttgtgcatagtatctaacatttgtg
gagatctttactctgtctctaaactggaacactcttaataaacgaaaagc
aaagagtgcctgtcctcctctatcctcaccagtctcttccctcttgtctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_64965690_64966854
seq2: B6Ng01-259F22.g_74_1223

seq1  GTTGGCATGGTCCATACATATATGTATGTGGCAGCATCCACTGAAATATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCATGGTCCATACATATATGTATGTGGCAGCATCCACTGAAATATG  50

seq1  GGCAAGCTACCAGGATCAGATTCTCCTTTCTCCAGCAGCTACCAACTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGCTACCAGGATCAGATTCTCCTTTCTCCAGCAGCTACCAACTGCC  100

seq1  AATAGTACCTCAGCTAGGAGCAGGGCTTCATGAGCTCCCTCATACTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTACCTCAGCTAGGAGCAGGGCTTCATGAGCTCCCTCATACTACAT  150

seq1  GCTTCCTGAAGGCTAGCCATAAGCTTAACTCTTTTGTTTTAAATCTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTGAAGGCTAGCCATAAGCTTAACTCTTTTGTTTTAAATCTTTTC  200

seq1  TTAGGTTGGAACCCAGCATGGTCATGGGCACTGCCAGAAGGAATGGAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTGGAACCCAGCATGGTCATGGGCACTGCCAGAAGGAATGGAAAC  250

seq1  CTTATGCCAACTAGGAAGTTGATATTTCTTTCAACTTTCCTATTGTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGCCAACTAGGAAGTTGATATTTCTTTCAACTTTCCTATTGTGTCA  300

seq1  GAGAGGAGAGCATGCTCAGTGATATCAGACCTCTTATCTCAGCATCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGAGCATGCTCAGTGATATCAGACCTCTTATCTCAGCATCTTCA  350

seq1  CAAACACATGTTTGTGTTTGCTGAAGATCCTGGTGTCCCATACATATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACATGTTTGTGTTTGCTGAAGATCCTGGTGTCCCATACATATTTT  400

seq1  CCATGTAGACACTTTGCTTTAACAAACTATCAAATTTTAATAAATAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTAGACACTTTGCTTTAACAAACTATCAAATTTTAATAAATAGACA  450

seq1  ATAGGTGCCTTTAATCTTTTTTTAAACAACAGAAAATATTTGTACATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTGCCTTTAATCTTTTTTTAAACAACAGAAAATATTTGTACATATA  500

seq1  TATATACATATATAATTTACTTATATACTTATATGTATGTATATATATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACATATATAATTTACTTATATACTTATATGTATGTATATATATTT  550

seq1  ATATTTATATATATGAAAGGAAAATTTATATACAAAAATTAAATATCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATATATATGAAAGGAAAATTTATATACAAAAATTAAATATCCAC  600

seq1  TCTTAATATAATAGACAATTATACAGAAACATTAGCATGGTTGTGTTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATATAATAGACAATTATACAGAAACATTAGCATGGTTGTGTTACA  650

seq1  CAGCATGGGTGTTTACATGTTTGCATTTACATGGCTAGATTTCTGTAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGGGTGTTTACATGTTTGCATTTACATGGCTAGATTTCTGTAGAT  700

seq1  GATAAACATCTGCACAG-AAAAAAATGTGCAGAGCAGTTCTTTTCATTTC  749
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GATAAACATCTGCACAGAAAAAAAATGTGCAGAGCAGTTCTTTTCATTTC  750

seq1  TCTGAACAATTCCTATCTTTCCTTCTATAAGCAGAAGAAACAATGGAATC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACAATTCCTATCTTTCCTTCTATAAGCAGAAGAAACAATGGAATC  800

seq1  ACTTCTATTTTGGAAGAACTACTCTATTTTAGAGCTTTGTGATTTGGATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTATTTTGGAAGAACTACTCTATTTTAGAGCTTTGTGATTTGGATT  850

seq1  TCAATGTTATAAGAAATTAGGGATTATAGGGATTAGGTCAAACTGGCAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTTATAAGAAATTAGGGATTATAGGGATTAGGTCAAACTGGCAAA  900

seq1  GCAGTTTAAAATGAAACAAAGGCTGAGTAAGGATTCCCCAGCCCAGTGCT  949
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GCAGTTTAAAATGAAAC-AAGGCTGAGTAAGGATTCCCCAGCCCAGTGCT  949

seq1  AGAAG-ATGTGGTTCCTGTTTGCCTATAT-CCAAGTGTGATTGCCAAGGG  997
      ||||| |||||||||||| |||||||||| ||||||||||||||||||||
seq2  AGAAGAATGTGGTTCCTG-TTGCCTATATCCCAAGTGTGATTGCCAAGGG  998

seq1  ACTTCAGTTTCTGGCTTAAAAGCTTGTCTTGTGCATAGTATCCTAACATT  1047
      || |||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AC-TCAGTTTCTGGCTTAAAAGCTTGTCTTGTGCATAGTAT-CTAACATT  1046

seq1  TGT-GAGATTCTTTACTCTGTCTCTAAACTGAAACACTCTTTATAAAAGG  1096
      ||| |||| |||||||||||||||||||||| ||||||||| ||||| | 
seq2  TGTGGAGA-TCTTTACTCTGTCTCTAAACTGGAACACTCTTAATAAACG-  1094

seq1  AAAAAGGCCAAAGAGTTCCCTGTTCCTTCCTTTCTTTCTCCCTCCACCCA  1146
       |||||  ||||||| | |||||  | |||| | |     ||| ||||  
seq2  -AAAAG--CAAAGAG-TGCCTGT--CCTCCTCTAT-----CCT-CACC--  1130

seq1  TCTCTCTTCCCTCTT-TCTC  1165
        ||||||||||||| ||||
seq2  AGTCTCTTCCCTCTTGTCTC  1150


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