BAC Information

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BAC

Clone NameB6Ng01-259L15
Chromosome15 (Build37)
Map Location 50,897,945 - 50,898,828
singlet/doubletsinglet
Overlap genenone
Upstream geneTrps1, LOC100039644
Downstream geneLOC100039662, Eif3s3, LOC100039679, D530033C11Rik, Rad21, Aard
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259L15.bB6Ng01-259L15.g
ACCGA064835GA064836
length623899
definitionB6Ng01-259L15.b B6Ng01-259L15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgttttgttttaagttgatgctatcagtctctctcttttagtt
aggatgtttggactgttcacatttaaattgatagtttgcagtaataggat
taacatcttccactgttgaaactcttttggtttcattccacatttttgtt
ttatttacttatttatttatttttgagacaaggtttttctatgtagccct
ggctgtcttagaactcattctgtagtccaggctggcctgcacagagaaat
tttaatcaatcaacatggctgctctggcaaatgatcacatttccaaagac
catggtgtatgttgtccagctggaatggagacatgctctggattacaata
tgatctgggtggaatgcaggaatgctcttagttaaacatctttaattcct
aacaatgtaggtagggttagtttatagaagaaaacagcagccatgtttga
aagtgacagctaattgaggggcaaagtgatgaatcagagaatgatctgac
agaatgaatcagagatgggatacacccaactctcaggagaacagcaaagg
aaagaaaggctacttaagggcagcacagagaactggggagaaagagattg
gaggaggagaggaagagggagag

gaattcctcatttctatgtcatcatgagaaaaaggaacatagcagaatca
atccttccctttatcagtaaataaattagtgaagagacataaatatacat
ataagtagaggttaatatgtttatattatatatttatatataatatttac
atatatttttaatgtttatattttttattaaatctaggctccttgagact
catgagttgtctacacacttgaatgggcgctgagagaagtgccctggatt
ctgtcttcaaatgatccagttcccttcctctctgcatggacaccatttct
ggttgcgcggcctagcctcacaggctccatcatgtcaggtttcctgcggc
ctacacttcagacatttcctgccagaacctgcacacctgaaaacaaaggg
gctagctcttagctttctatctcactggacttgtgcaatcatgaagccac
aaacatacaccattctggtaattaagagacatgtaaagaaagtagggtac
aaaatgaactaacctattaaaaataaccactaaccaaccatataagcaac
atatgatttggggagtaactaataagctgttaacacgcatacacacacac
acacacacacacacacacacacacacacacatataggtataggtataggt
ataggtataggtataggtataggtataggtataggtatagggaaacgtat
agtggaggtagctatttgtctagttgaaaatgagtacaaatatgcactca
gttgccagggtccagaacacagaccaatagtaaagaaaacatctttacac
ttggcttgcccaggtcttgaatggcccctgaatcttaacatttgttaatt
actcccagttttttcggtggggctgggactttagaaggttgtctgaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_50897945_50898828
seq2: B6Ng01-259L15.g_67_965

seq1  GAATTCCTCATTTCTATGTCATCATGAGAAAAAGGAACATAGCAGAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCATTTCTATGTCATCATGAGAAAAAGGAACATAGCAGAATCA  50

seq1  ATCCTTCCCTTTATCAGTAAATAAATTAGTGAAGAGACATAAATATACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCCCTTTATCAGTAAATAAATTAGTGAAGAGACATAAATATACAT  100

seq1  ATAAGTAGAGGTTAATATGTTTATATTATATATTTATATATAATATTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAGAGGTTAATATGTTTATATTATATATTTATATATAATATTTAC  150

seq1  ATATATTTTTAATGTTTATATTTTTTATTAAATCTAGGCTCCTTGAGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTTTAATGTTTATATTTTTTATTAAATCTAGGCTCCTTGAGACT  200

seq1  CATGAGTTGTCTACACACTTGAATGGGCGCTGAGAGAAGTGCCCTGGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTTGTCTACACACTTGAATGGGCGCTGAGAGAAGTGCCCTGGATT  250

seq1  CTGTCTTCAAATGATCCAGTTCCCTTCCTCTCTGCATGGACACCATTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTCAAATGATCCAGTTCCCTTCCTCTCTGCATGGACACCATTTCT  300

seq1  GGTTGCGCGGCCTAGCCTCACAGGCTCCATCATGTCAGGTTTCCTGCGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCGCGGCCTAGCCTCACAGGCTCCATCATGTCAGGTTTCCTGCGGC  350

seq1  CTACACTTCAGACATTTCCTGCCAGAACCTGCACACCTGAAAACAAAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTTCAGACATTTCCTGCCAGAACCTGCACACCTGAAAACAAAGGG  400

seq1  GCTAGCTCTTAGCTTTCTATCTCACTGGACTTGTGCAATCATGAAGCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCTCTTAGCTTTCTATCTCACTGGACTTGTGCAATCATGAAGCCAC  450

seq1  AAACATACACCATTCTGGTAATTAAGAGACATGTAAAGAAAGTAGGGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATACACCATTCTGGTAATTAAGAGACATGTAAAGAAAGTAGGGTAC  500

seq1  AAAATGAACTAACCTATTAAAAATAACCACTAACCAACCATATAAGCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAACTAACCTATTAAAAATAACCACTAACCAACCATATAAGCAAC  550

seq1  ATATGATTTGGGGAGTAACTAATAAGCTGTTAACACGCATACACACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATTTGGGGAGTAACTAATAAGCTGTTAACACGCATACACACACAC  600

seq1  ACACACACACACACACACACACACACACACATATAGGTATAGGTATAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACATATAGGTATAGGTATAGGT  650

seq1  ATAGGTATAGGTATAGGTATAGGTATAGGTATAGGTATAGGGAAACATAT  700
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATAGGTATAGGTATAGGTATAGGTATAGGTATAGGTATAGGGAAACGTAT  700

seq1  AGT-GAGGTAGCTATTTGTCTAGTTG-AAATGAGTACAAATATGCACTCA  748
      ||| |||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGTGGAGGTAGCTATTTGTCTAGTTGAAAATGAGTACAAATATGCACTCA  750

seq1  GTTGCCA-GGTCCAGAACACAGA-CAATAGT-AAGAAAACATC-TTACAC  794
      ||||||| ||||||||||||||| ||||||| ||||||||||| ||||||
seq2  GTTGCCAGGGTCCAGAACACAGACCAATAGTAAAGAAAACATCTTTACAC  800

seq1  TT-GCCTGCCCAGGTC-TGAATGG-CCCTG-ATCTTAACA-TTGTTAATT  839
      || || |||||||||| ||||||| ||||| ||||||||| |||||||||
seq2  TTGGCTTGCCCAGGTCTTGAATGGCCCCTGAATCTTAACATTTGTTAATT  850

seq1  ACT-CCAGTATTTCCG--TGGGCT-GGACTTTAGAAGGTAGTCTGAAAA  884
      ||| ||||| ||| ||   ||||| |||||||||||||| |||||||||
seq2  ACTCCCAGTTTTTTCGGTGGGGCTGGGACTTTAGAAGGTTGTCTGAAAA  899


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