BAC Information

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BAC

Clone NameB6Ng01-260A24
Chromosome15 (Build37)
Map Location 89,151,742 - 89,152,586
singlet/doubletsinglet
Overlap genenone
Upstream geneZdhhc25, Brd1, Zbed4, Alg12, Creld2, Pim3, 1700019P01Rik, Mlc1, LOC667558, Mov10l1, Panx2, Trabd, 1300018J18Rik, Hdac10, Mapk12, Mapk11, Plxnb2, LOC100043185, 1700027J05Rik, Saps2, Sbf1
Downstream geneAdm2, Miox, Tmem112b, Ncaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik, Mapk8ip2, Arsa, Shank3, Acr, Rabl2a, LOC676575, Syt10, Alg10b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260A24.g
ACCGA065083
length844
definitionB6Ng01-260A24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacctgaagtcttcctagctctgcctcttgaatagctgggatta
caatcctgcaccaccatcccagcaatcagcctttttttttaacgctaatt
tttattttttcatgctttgatatgtctccttttgacttattttttgttaa
tctttagcatatagaattatggattttattatgacatgttcataaacata
ttgttgggttttgcttgtattcataccataggtccttggttaatctatat
tccagtgatttttttttttcagatttttccacaattaaaacccctaccat
tggaagctcacacacatgcggtatataccaaattgttcttcacaatgatt
gtgccaatccaccatccaccgtggattctgtgacattagttcttaacatc
tttgtcagcctgacaaaactattcaaaacaaaaaaacctatcagaagcac
tttttattttttttctgactgcaggaacatctcttcaactctctgtgttt
cctcttctatttcactatgtccctttgtggggcttccccgggacttggtc
actctgtccttcctgctgaacatacacgggtgctcagtaagcatttgccg
gatgcgtatatacaagtcttcagtgcaaaccatgctgaagatgttacttt
accctctgagaaaaatattagcagagtcacccaattgcttgttcttatca
gttgtgggaagggtggtttcgtcagacttacagaagagcagtgtgctaag
catggtggtgcacaccagcatcaggaaacagaggtaggattgttagttag
tttaagaccagtttgggctacatagcaaaaccctgctcctctcc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_89151742_89152586
seq2: B6Ng01-260A24.g_67_910 (reverse)

seq1  GGAGAGGAGCAGGGTTTTGCTATGTAGCCCAGACTGGTCTTAAAACTAAC  50
      ||||||||||||||||||||||||||||||| ||||||||| ||||||||
seq2  GGAGAGGAGCAGGGTTTTGCTATGTAGCCCAAACTGGTCTT-AAACTAAC  49

seq1  TAACAATCCTACCTCTGTTTCCTGATGCTGGTGTGCACCACCATGCTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATCCTACCTCTGTTTCCTGATGCTGGTGTGCACCACCATGCTTAG  99

seq1  CACACTGCTCTTCTGTAAGTCTGACGAAACCACCCTTCCCACAACTGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGCTCTTCTGTAAGTCTGACGAAACCACCCTTCCCACAACTGATA  149

seq1  AGAACAAGCAATTGGGTGACTCTGCTAATATTTTTCTCAGAGGGTAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAGCAATTGGGTGACTCTGCTAATATTTTTCTCAGAGGGTAAAGT  199

seq1  AACATCTTCAGCATGGTTTGCACTGAAGACTTGTATATACGCATCCGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTTCAGCATGGTTTGCACTGAAGACTTGTATATACGCATCCGGCA  249

seq1  AATGCTTACTGAGCACCCGTGTATGTTCAGCAGGAAGGACAGAGTGACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTACTGAGCACCCGTGTATGTTCAGCAGGAAGGACAGAGTGACCA  299

seq1  AGTCCCGGGGAAGCCCCACAAAGGGACATAGTGAAATAGAAGAGGAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCGGGGAAGCCCCACAAAGGGACATAGTGAAATAGAAGAGGAAACA  349

seq1  CAGAGAGTTGAAGAGATGTTCCTGCAGTCAGAAAAAAAATAAAAAGTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGTTGAAGAGATGTTCCTGCAGTCAGAAAAAAAATAAAAAGTGCT  399

seq1  TCTGATAGGTTTTTTTGTTTTGAATAGTTTTGTCAGGCTGACAAAGATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATAGGTTTTTTTGTTTTGAATAGTTTTGTCAGGCTGACAAAGATGT  449

seq1  TAAGAACTAATGTCACAGAATCCACGGTGGATGGTGGATTGGCACAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACTAATGTCACAGAATCCACGGTGGATGGTGGATTGGCACAATCA  499

seq1  TTGTGAAGAACAATTTGGTATATACCGCATGTGTGTGAGCTTCCAATGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAAGAACAATTTGGTATATACCGCATGTGTGTGAGCTTCCAATGGT  549

seq1  AGGGGTTTTAATTGTGGAAAAATCTGAAAAAAAAAAATCACTGGAATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTTTAATTGTGGAAAAATCTGAAAAAAAAAAATCACTGGAATATA  599

seq1  GATTAACCAAGGACCTATGGTATGAATACAAGCAAAACCCAACAATATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAACCAAGGACCTATGGTATGAATACAAGCAAAACCCAACAATATGT  649

seq1  TTATGAACATGTCATAATAAAATCCATAATTCTATATGCTAAAGATTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAACATGTCATAATAAAATCCATAATTCTATATGCTAAAGATTAAC  699

seq1  AAAAAATAAGTCAAAAGGAGACATATCAAAGCATGAAAAAATAAAAATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAAGTCAAAAGGAGACATATCAAAGCATGAAAAAATAAAAATTA  749

seq1  GCGTTAAAAAAAAAGGCTGATTGCTGGGATGGTGGTGCAGGATTGTAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTAAAAAAAAAGGCTGATTGCTGGGATGGTGGTGCAGGATTGTAATC  799

seq1  CCAGCTATTCAAGAGGCAGAGCTAGGAAGACTTCAGGTTGAATTC  845
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTATTCAAGAGGCAGAGCTAGGAAGACTTCAGGTTGAATTC  844