BAC Information

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BAC

Clone NameB6Ng01-261A04
Chromosome15 (Build37)
Map Location 59,875,458 - 59,876,478
singlet/doubletsinglet
Overlap genenone
Upstream geneMtss1, LOC100040330, EG268809, LOC665565, Sqle, E430025E21Rik, Nsmce2, Trib1, LOC665602, EG632248, LOC665613, 4933412E24Rik
Downstream geneLOC100040266, LOC623048, LOC211832, LOC623094, EG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261A04.bB6Ng01-261A04.g
ACCGA065786GA065787
length1,0151,191
definitionB6Ng01-261A04.b B6Ng01-261A04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttggccatttctcaatatcctaaaaattcaggatttatgagttg
ttttttttttgttgttttgtgcaagctggtatcattctcttcagtgtcat
tttgtagcagagattgcaacacccttgacattgcaagagggatcttgaaa
tcagatgggaatcactgacatgccagactctcctaatttaagccctgggt
gtttgtctctcttcctgctttgctgaggatttcctgaaagatgtcaacag
tgcacttggaagtccagtcaaagagcaggcagtcactggggatggggttc
agctttccttgctcctcttaatcctgcacttagtgggaactggtttctca
ggatggcagcacaacactggtccccatgtgcaggcagtgctccaatatct
actttttttttttaaagatttgtttattttattttattttattttatttt
attttattttattttattttattttattttatttatatgagtacactgta
gctgtcttcagacacattagaagaaggtatcagatcccatgacagatggt
tgtgagccaccatgtggttgctggaacttgaactcaggacttccgggaga
gcagtcagtgttcttaaccactgagccatctttccagccccattcggaca
ccctcttaaaagaggaaaacattgctggatcctccggtagtactatgtcc
aattttctgaggaaccgccagactgatttccaaagtggttgtacaagcct
gcaatcccaccaacaatggagaagtgttcctctttctccacatccacgcc
agcatctgctgtcacctgaatttttgatcttagccattctgactggtgtg
aggtggaatctcaggttgttttgatttgcatttccctgatgattaaagga
tgttgaacattttttcaagtgcttctctgccattcggtattcctcaggtg
agaattctttgttcaggttctgagcccattttttttccattttataggta
ttaactcattacatt
gaattcttgcctgaggaataacgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaattaaaacaaccctgagat
tccatctcacaccagtcataatggctaagatcaaaaactcaggtgacagc
agatgctggagaggatgtggagaaagaggagcactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagcactgctggattatcctgcaatacctctcctgggc
atatatccagaagatgtcccaaccagtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatagaaaaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaaaatgaatttatgaaattcctaggcaa
atggttggacctggagggcattatcctgagttaggtaacccaatcacaaa
agaactcacatgatatgtactcactgataaatggatattagcccagaaac
ttagtatacccgagatataagataaaatttgcaaaacacatgaaactgaa
gaacgaagaccaaagtgtggacactttgccccttcttagaattggaaaca
atcacccaaggaaggaattacagagacaaagtttggagctgagacaaaag
gatggaccatctagagattgccatatccagggatcaatcccataatcagc
ctccaaaccctgacaccattgcatacactagcaagcgtttgctgaaagga
ccctgatatagctgtctcttgtgatactaggctgggccctagcaaacaca
taagtggattctcacagtcagctattggatggatcacagggcccccaatg
gacgagctagagaaaggacccaaggagctaaagggatctgcaaccctgca
gtgctacacatatgaactacccagtacctggagctctgtactctagctgc
atatgtatcaaaatgtctagcagcatcacttgtaaagagaaggttccatt
ggtacaggcaacttttaattgcccaggtcaggaatgcagttcaaacgtgg
catggcttggtataggtatagcgtggtgcgatctcttctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_59875458_59876478
seq2: B6Ng01-261A04.b_45_1059

seq1  GAATTCTTGGCCATTTCTCAATATCCTAAAAATTCAGGATTTATGAGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGCCATTTCTCAATATCCTAAAAATTCAGGATTTATGAGTTG  50

seq1  TTTTTTTTTTGTTGTTTTGTGCAAGCTGGTATCATTCTCTTCAGTGTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTGTTGTTTTGTGCAAGCTGGTATCATTCTCTTCAGTGTCAT  100

seq1  TTTGTAGCAGAGATTGCAACACCCTTGACATTGCAAGAGGGATCTTGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGCAGAGATTGCAACACCCTTGACATTGCAAGAGGGATCTTGAAA  150

seq1  TCAGATGGGAATCACTGACATGCCAGACTCTCCTAATTTAAGCCCTGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGGGAATCACTGACATGCCAGACTCTCCTAATTTAAGCCCTGGGT  200

seq1  GTTTGTCTCTCTTCCTGCTTTGCTGAGGATTTCCTGAAAGATGTCAACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCTCTCTTCCTGCTTTGCTGAGGATTTCCTGAAAGATGTCAACAG  250

seq1  TGCACTTGGAAGTCCAGTCAAAGAGCAGGCAGTCACTGGGGATGGGGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTTGGAAGTCCAGTCAAAGAGCAGGCAGTCACTGGGGATGGGGTTC  300

seq1  AGCTTTCCTTGCTCCTCTTAATCCTGCACTTAGTGGGAACTGGTTTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCCTTGCTCCTCTTAATCCTGCACTTAGTGGGAACTGGTTTCTCA  350

seq1  GGATGGCAGCACAACACTGGTCCCCATGTGCAGGCAGTGCTCCAATATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCAGCACAACACTGGTCCCCATGTGCAGGCAGTGCTCCAATATCT  400

seq1  ACTTTTTTTTTTTAAAGATTTGTTTATTTTATTTTATTTTATTTTATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTTTTTTAAAGATTTGTTTATTTTATTTTATTTTATTTTATTTT  450

seq1  ATTTTATTTTATTTTATTTTATTTTATTTTATTTATATGAGTACACTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTTATTTTATTTTATTTTATTTTATTTATATGAGTACACTGTA  500

seq1  GCTGTCTTCAGACACATTAGAAGAAGGTATCAGATCCCATGACAGATGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTTCAGACACATTAGAAGAAGGTATCAGATCCCATGACAGATGGT  550

seq1  TGTGAGCCACCATGTGGTTGCTGGAACTTGAACTCAGGACTTCCGGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCCACCATGTGGTTGCTGGAACTTGAACTCAGGACTTCCGGGAGA  600

seq1  GCAGTCAGTGTTCTTAACCACTGAGCCATCTTTCCAGCCCCATTCGGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAGTGTTCTTAACCACTGAGCCATCTTTCCAGCCCCATTCGGACA  650

seq1  CCCTCTTAAAAGAGGAAAACATTGCTGGATCCTCCGGTAGTACTATGTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTAAAAGAGGAAAACATTGCTGGATCCTCCGGTAGTACTATGTCC  700

seq1  AATTTTCTGAGGAACCGCCAGACTGATTTCCAAAGTGGTTGTACAAGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTGAGGAACCGCCAGACTGATTTCCAAAGTGGTTGTACAAGCCT  750

seq1  GCAATCCCACCAACAATGGAGAAGTGTTCCTCTTTCTCCACATCCACGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCCCACCAACAATGGAGAAGTGTTCCTCTTTCTCCACATCCACGCC  800

seq1  AGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTG  850

seq1  AGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATT-AAGG  899
      ||||||||||||| ||||||||||||||||||||||||||||||| ||||
seq2  AGGTGGAATCTCA-GGTTGTTTTGATTTGCATTTCCCTGATGATTAAAGG  899

seq1  ATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGT  949
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATGTTGAACATTTTTTCAAGTGCTTCTCTGCCATTCGGTATTCCTCAGGT  949

seq1  GAGAATTCTTTGTTCA-GTTCTGAGCCCCATTTTTTTTTCCATTTTTTAT  998
      |||||||||||||||| |||||||||||   |||||||||||||||    
seq2  GAGAATTCTTTGTTCAGGTTCTGAGCCC--ATTTTTTTTCCATTTT---A  994

seq1  TAGGTATTTAACTCATTTACATT  1021
      |||||| |||||||| |||||||
seq2  TAGGTA-TTAACTCA-TTACATT  1015