BAC Information

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BAC

Clone NameB6Ng01-261J16
Chromosome15 (Build37)
Map Location 28,104,074 - 28,105,058
singlet/doubletsinglet
Overlap genenone
Upstream geneAnk, BC087945, LOC100040622, BC052328, Trio, LOC667126
Downstream geneDnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261J16.bB6Ng01-261J16.g
ACCGA066233GA066234
length4901,004
definitionB6Ng01-261J16.b B6Ng01-261J16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttaggcaaatggatgtatctggaggatatcatcctgagtgaggt
aacacaatcacaaaagaactcacttgatatgcactcactgataagtggat
attagcccagaaactttgaatacccaagatacaatttgtaaaacacaaga
aaatcaagaagaagtaagaccaatacgtggatacttcattcctccttaga
atagggaacaatatacccatggaaggagttacagagacaaagtttggagc
tgagacgaaaggatggaccatccagagactgccccaaccgaggatccgtc
ccataatcagcccccaaactcagacactattgcatacgccagcaagattt
tgctgaaaggaccctgatatagctgtctcttgtgaggctatgccagtgcc
tggcaaacacagaattggatgctcacagtcagctgttggatggaacacag
ggctcccaatggaggagctagagaaagtacccaaggagct

gaattccagagattaggcaagcttggtcacatgttttcctctgatctgtt
cggatatgtgggatgagagaggaggctgtggcactctgtaacctatgagg
ggaaattataaggaatgaaaggggagcacagaattctggcgagtttaccc
actgcggtggttggaatgagagtggtctccaatggctcaggtattggaat
gattggtcttcagttagtggaactgtttgggaatgattagggggtgtggg
ctttaaggctccaaaagcttgtgtcaggcccagtcttgctctctccctac
ctatatcctttggaacaaatgcaaactctcagctactgctccagtgagat
gctggcctgcctgctgctctgttccccactataatgacaatgacctaact
ctctgaaactgtcatcaagcctctgatgtctgctttcttttaaaagttgc
cctggtcagggcatcctcacagcaatagaagaataactaacacacacatt
gacactgcttttttgtttttttttaaatcagtgtcaacatcctgatgggt
gaggttctagaacattccctgccagggtcagggttcaggtgctgtacaac
ttaacatatattttaatttcaggaggttattgatctgacatgggcctcgt
gggggctaagactgaacctggaagagctgcatcgttcttccttgaggctc
aggggaagatctatttttctgctttttctagagtccagaagccacagcgt
ttcctggtttctccttcgaggccaagcagtctttgtgctgtctttggttt
atacttcttagtatgcccttccattggccccttcttctctctctctcttt
ttcctgtttataaagacccccacaatttcctctgagctcatctggattag
tctagagcatttcttttcatgtttgacaccagttgaatgaacaattttcc
ttccctttcaacttaaatccttctggtggtgatgggaacatagctgccag
gctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_28104074_28105058
seq2: B6Ng01-261J16.g_66_1069

seq1  GAATTCCAGAGATTAGGCAAGCTTGGTCACATGTTTTCCTCTGATCTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGATTAGGCAAGCTTGGTCACATGTTTTCCTCTGATCTGTT  50

seq1  CGGATATGTGGGATGAGAGAGGAGGCTGTGGCACTCTGTAACCTATGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATATGTGGGATGAGAGAGGAGGCTGTGGCACTCTGTAACCTATGAGG  100

seq1  GGAAATTATAAGGAATGAAAGGGGAGCACAGAATTCTGGCGAGTTTACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTATAAGGAATGAAAGGGGAGCACAGAATTCTGGCGAGTTTACCC  150

seq1  ACTGCGGTGGTTGGAATGAGAGTGGTCTCCAATGGCTCAGGTATTGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCGGTGGTTGGAATGAGAGTGGTCTCCAATGGCTCAGGTATTGGAAT  200

seq1  GATTGGTCTTCAGTTAGTGGAACTGTTTGGGAATGATTAGGGGGTGTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGTCTTCAGTTAGTGGAACTGTTTGGGAATGATTAGGGGGTGTGGG  250

seq1  CTTTAAGGCTCCAAAAGCTTGTGTCAGGCCCAGTCTTGCTCTCTCCCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGGCTCCAAAAGCTTGTGTCAGGCCCAGTCTTGCTCTCTCCCTAC  300

seq1  CTATATCCTTTGGAACAAATGCAAACTCTCAGCTACTGCTCCAGTGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCCTTTGGAACAAATGCAAACTCTCAGCTACTGCTCCAGTGAGAT  350

seq1  GCTGGCCTGCCTGCTGCTCTGTTCCCCACTATAATGACAATGACCTAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCTGCCTGCTGCTCTGTTCCCCACTATAATGACAATGACCTAACT  400

seq1  CTCTGAAACTGTCATCAAGCCTCTGATGTCTGCTTTCTTTTAAAAGTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAACTGTCATCAAGCCTCTGATGTCTGCTTTCTTTTAAAAGTTGC  450

seq1  CCTGGTCAGGGCATCCTCACAGCAATAGAAGAATAACTAACACACACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCAGGGCATCCTCACAGCAATAGAAGAATAACTAACACACACATT  500

seq1  GACACTGCTTTTTTGTTTTTTTTTAAATCAGTGTCAACATCCTGATGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGCTTTTTTGTTTTTTTTTAAATCAGTGTCAACATCCTGATGGGT  550

seq1  GAGGTTCTAGAACATTCCCTGCCAGGGTCAGGGTTCAGGTGCTGTACAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTCTAGAACATTCCCTGCCAGGGTCAGGGTTCAGGTGCTGTACAAC  600

seq1  TTAACATATATTTTAATTTCAGGAGGTTATTGATCTGACATGGGCCTCGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATATATTTTAATTTCAGGAGGTTATTGATCTGACATGGGCCTCGT  650

seq1  GGGGGCTAAGACTGAACCTGGAAGAGCTGCATCGTTCTTCCTTGAGGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCTAAGACTGAACCTGGAAGAGCTGCATCGTTCTTCCTTGAGGCTC  700

seq1  AGGGGAAGATCTA-TTTTCTGCTTTTTCTAGAGTCCAGAAGCCACAGCGT  749
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAGATCTATTTTTCTGCTTTTTCTAGAGTCCAGAAGCCACAGCGT  750

seq1  TTCCTGG-TTCTCC-TCGAGGCC-AGCAGTC-TTGTGCTGTCTTTGG-TT  794
      ||||||| |||||| |||||||| ||||||| ||||||||||||||| ||
seq2  TTCCTGGTTTCTCCTTCGAGGCCAAGCAGTCTTTGTGCTGTCTTTGGTTT  800

seq1  ATACTTCTTAGTATG-CCTTTCATTGGCCCCTTCTTCTCTCTCTCTCTTT  843
      ||||||||||||||| |||| |||||||||||||||||||||||||||||
seq2  ATACTTCTTAGTATGCCCTTCCATTGGCCCCTTCTTCTCTCTCTCTCTTT  850

seq1  TT-CTG-TTATAAAGACCCCCACAA-TTCCTCTGAGCTCATCTGGA-TAG  889
      || ||| |||||||||||||||||| |||||||||||||||||||| |||
seq2  TTCCTGTTTATAAAGACCCCCACAATTTCCTCTGAGCTCATCTGGATTAG  900

seq1  TCTAGAGCA-TTCTTTTCATG-TTGACACCAGTTG-ATGACCAATTTTCC  936
      ||||||||| ||||||||||| ||||||||||||| |||| |||||||||
seq2  TCTAGAGCATTTCTTTTCATGTTTGACACCAGTTGAATGAACAATTTTCC  950

seq1  TTCACTTTCAACTTAAAT-CTTCTG--TGTGAT-GGAACATAGCTG-CAG  981
      ||| |||||||||||||| ||||||   ||||| |||||||||||| |||
seq2  TTCCCTTTCAACTTAAATCCTTCTGGTGGTGATGGGAACATAGCTGCCAG  1000

seq1  GCTC  985
      ||||
seq2  GCTC  1004


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