BAC Information

Click to search

BAC

Clone NameB6Ng01-261P23
Chromosome15 (Build37)
Map Location 64,259,477 - 64,454,140
singlet/doubletdoublet
Overlap genenone
Upstream geneEG239502, EG432959, LOC672194, Mlze, AI987692, Gsdmdc2, 9930109F21Rik, LOC665769, 9030605I04Rik, 4933426G20Rik, 0910001A06Rik, Ddef1
Downstream geneAdcy8, LOC268812, LOC100040790, LOC665836
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261P23.bB6Ng01-261P23.g
ACCGA066529GA066530
length694949
definitionB6Ng01-261P23.b B6Ng01-261P23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,259,477 - 64,260,169)(64,453,191 - 64,454,140)
sequence
gaattccaaaatgtgacacaattgtagaaactatctgcagctggcaaaac
cacactttgttagagaacaagagagtctgaagcacatagccccatagccc
cacacctgagattaaaatgaaaaatattactataatatttctgtgttttt
aaaaagggagcaaaaattccagatttcttactacacctgctagtgtctcc
cagaagtgctaaacctttggctactccttttcatttcagggtattagcag
ctgtaccttctgtctcctccagttgaacatcttgcccataaagcaggctg
cctgtgctagccttccctttatctgaatgggggaggtaggcgaggggaga
agtttatggggcatcaagggtgcatcacttccctgtgaacctgatggatg
cagaacttgagacatttctcaggtgccataaagcccaaaaacaaaaggcg
aggaagcaatgtgaggccggagccatctcaaaagatgctacactgcggtc
tgtctcccaaggtgggaaccgggccacatgaagacctttccttcttggag
atggctgagatcttctgtttagatacaagtggagctctgaggaattggtc
agggttcatgctctgtactgacagtttgctatagcttgactacaagaagc
tcgcatgctgggggcttggttggctggcacctaagtactgttgg
gaattcacacacctacctctccagccagcaatagcttaaaatcaaaacta
gattctcctggggaaataaacaaaagatcgtcccatttctggcacacctg
aggacaggggcctagattggtacctgctgctcaggagtctataattgggg
agggtggtgtcaccgtgtgctgttccctggggtttcagcacaaattctca
caagcaccacaggtgccacatggatgtcttcatcagctgttctttgaagc
agatggatccactatggtgagaccccataggtaacaatacttctgtttag
tctgccaggtcctagaagtgggcatttctgctaccacagtcatggtttgc
agggagtcctttgccggaccatctaaaaagaggctattatcactgtggat
ggctccctgagaagtaggtgttccaagagccctggcttagggaccacata
cctggaccctggcaaacctttgctttggccagcactaggaccgtggctga
gtaagtcagcctcagctttggtttcctgtcctaaaatagatctgataatt
ctttgctgcttagtcacagtagtggagtgaggaaaacaggagagccacta
ctggaaatgtgaaaaagagcagagagtagtatacggcagttccgttgccc
ccctttagatccttcatacctctgcctagcatagatttcatggctgcaac
cttccttattggactgtgtatgccttccctagaagatctctccagcctgc
gattttcctgcaaaaacttgacaaggcctttcgcatgatatatggtgccc
cacaggactgaccccatgttctttctctaccatgatgacccacattcgac
tcttttcactagaacatttctgagcttattctcactgcttaaacactgat
ttcattaggctttcacactgggctcctatttttggacagaacctgaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_64259477_64260169
seq2: B6Ng01-261P23.b_43_736

seq1  GAATTCCAAAATGTGACACAATTGTAGAAACTATCTGCAGCTGGCAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAATGTGACACAATTGTAGAAACTATCTGCAGCTGGCAAAAC  50

seq1  CACACTTTGTTAGAGAACAAGAGAGTCTGAAGCACATAGCCCCATAGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTTGTTAGAGAACAAGAGAGTCTGAAGCACATAGCCCCATAGCCC  100

seq1  CACACCTGAGATTAAAATGAAAAATATTACTATAATATTTCTGTGTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTGAGATTAAAATGAAAAATATTACTATAATATTTCTGTGTTTTT  150

seq1  AAAAAGGGAGCAAAAATTCCAGATTTCTTACTACACCTGCTAGTGTCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGGAGCAAAAATTCCAGATTTCTTACTACACCTGCTAGTGTCTCC  200

seq1  CAGAAGTGCTAAACCTTTGGCTACTCCTTTTCATTTCAGGGTATTAGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTGCTAAACCTTTGGCTACTCCTTTTCATTTCAGGGTATTAGCAG  250

seq1  CTGTACCTTCTGTCTCCTCCAGTTGAACATCTTGCCCATAAAGCAGGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACCTTCTGTCTCCTCCAGTTGAACATCTTGCCCATAAAGCAGGCTG  300

seq1  CCTGTGCTAGCCTTCCCTTTATCTGAATGGGGGAGGTAGGCGAGGGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCTAGCCTTCCCTTTATCTGAATGGGGGAGGTAGGCGAGGGGAGA  350

seq1  AGTTTATGGGGCATCAAGGGTGCATCACTTCCCTGTGAACCTGATGGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATGGGGCATCAAGGGTGCATCACTTCCCTGTGAACCTGATGGATG  400

seq1  CAGAACTTGAGACATTTCTCAAGTGCCATAGAGCCCAGAAACAAAAGGCG  450
      ||||||||||||||||||||| |||||||| |||||| ||||||||||||
seq2  CAGAACTTGAGACATTTCTCAGGTGCCATAAAGCCCAAAAACAAAAGGCG  450

seq1  AGGAGGCAATGTGAGGCCAGAGCCATCTCAAAAGATGCTACACTGCAGTA  500
      |||| ||||||||||||| ||||||||||||||||||||||||||| || 
seq2  AGGAAGCAATGTGAGGCCGGAGCCATCTCAAAAGATGCTACACTGCGGTC  500

seq1  GGTCTCCCAAGGTGGGAACCGGGCCACATGAAGACCTTTCCTTCTTGGAG  550
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCCAAGGTGGGAACCGGGCCACATGAAGACCTTTCCTTCTTGGAG  550

seq1  ATGGCTGTGAGCAGCTGTAGAGATACAAGTGGAGCTCTGAGGAATTGGTC  600
      ||||||| || |  ||||  ||||||||||||||||||||||||||||||
seq2  ATGGCTGAGATCTTCTGTTTAGATACAAGTGGAGCTCTGAGGAATTGGTC  600

seq1  AGGGTTCATGCTCTGTACTGA-GGTTTGCTATAGCTTGACTAGAAGAAGC  649
      |||||||||||||||||||||  ||||||||||||||||||| |||||||
seq2  AGGGTTCATGCTCTGTACTGACAGTTTGCTATAGCTTGACTACAAGAAGC  650

seq1  TCGCATGCTGGGGGCTTGGTTGGCTGGCAGCTAATTACTGTTGG  693
      ||||||||||||||||||||||||||||| |||| |||||||||
seq2  TCGCATGCTGGGGGCTTGGTTGGCTGGCACCTAAGTACTGTTGG  694

seq1: chr15_64453191_64454140
seq2: B6Ng01-261P23.g_70_1018 (reverse)

seq1  CTTTCAACTTCTGTACAAAAAATAGGGAGCCAGTGTGAAAGGCCAATGGA  50
      ||||||  |||||| | |||||||||   |||||||||||| | |||| |
seq2  CTTTCAGGTTCTGT-CCAAAAATAGGAGCCCAGTGTGAAAGCCTAATGAA  49

seq1  AGCAGTGTTTGAGCAGTGAGAATAAGCTCGGAAATGTTCTAGTGGAAAGA  100
      | |||||||| |||||||||||||||||| |||||||||||||| |||||
seq2  ATCAGTGTTTAAGCAGTGAGAATAAGCTCAGAAATGTTCTAGTGAAAAGA  99

seq1  ATGGAATGTGGGTCACCAGGTTGGAGAAAGGAACATGGGGTCAGTCCTGT  150
       | |||||||||||| || | | |||||| ||||||||||||||||||||
seq2  GTCGAATGTGGGTCATCATGGTAGAGAAA-GAACATGGGGTCAGTCCTGT  148

seq1  GGGGCACCATATATCATG-GGAAGGCCTTGTCAAGTTTGTGCAGGAAAAT  199
      |||||||||||||||||| | ||||||||||||||||| |||||||||||
seq2  GGGGCACCATATATCATGCGAAAGGCCTTGTCAAGTTTTTGCAGGAAAAT  198

seq1  TGCAGGCTGGAGAGATCTTCTAGGGAAGGCATACACAGTCCAATAAGGAA  249
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGCTGGAGAGATCTTCTAGGGAAGGCATACACAGTCCAATAAGGAA  248

seq1  GGTTGCAGCCATGAAATCTATGCTAGGCAGAGGTATGAAGGATCTAAAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCAGCCATGAAATCTATGCTAGGCAGAGGTATGAAGGATCTAAAGG  298

seq1  GGGGCAACGGAACTGCCTTATACTACTCTCTGCTCTTTTTCACATTTCCA  349
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGGGCAACGGAACTGCCGTATACTACTCTCTGCTCTTTTTCACATTTCCA  348

seq1  GTATTGGCTCTCCTGTTTTCCTCACTCCACTACTGTGACTAAGCAGCAAA  399
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGGCTCTCCTGTTTTCCTCACTCCACTACTGTGACTAAGCAGCAAA  398

seq1  GAATTATCAGATCTATTTTAGGACAGGAAACCAAAGCTGAGGCTGACTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATCAGATCTATTTTAGGACAGGAAACCAAAGCTGAGGCTGACTTA  448

seq1  CTCAGCCACGGTCCTAGTGCTGGCCAAAGCAAAGGTTTGCCAGGGTCCAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCACGGTCCTAGTGCTGGCCAAAGCAAAGGTTTGCCAGGGTCCAG  498

seq1  GTATGTGGTCCCTAAGCCAGGGCTCTTGGAACACCTACTTCTCAGGGAGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGGTCCCTAAGCCAGGGCTCTTGGAACACCTACTTCTCAGGGAGC  548

seq1  CATCCACAGTGATAATAGCCTCTTTTTAGATGGTCCGGCAAAGGACTCCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCACAGTGATAATAGCCTCTTTTTAGATGGTCCGGCAAAGGACTCCC  598

seq1  TGCAAACCATGACTGTGGTAGCAGAAATGCCCACTTCTAGGACCTGGCAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACCATGACTGTGGTAGCAGAAATGCCCACTTCTAGGACCTGGCAG  648

seq1  ACTAAACAGAAGTATTGTTACCTATGGGGTCTCACCATAGTGGATCCATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACAGAAGTATTGTTACCTATGGGGTCTCACCATAGTGGATCCATC  698

seq1  TGCTTCAAAGAACAGCTGATGAAGACATCCATGTGGCACCTGTGGTGCTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAAAGAACAGCTGATGAAGACATCCATGTGGCACCTGTGGTGCTT  748

seq1  GTGAGAATTTGTGCTGAAACCCCAGGGAACAGCACACGGTGACACCACCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAATTTGTGCTGAAACCCCAGGGAACAGCACACGGTGACACCACCC  798

seq1  TCCCCAATTATAGACTCCTGAGCAGCAGGTACCAATCTAGGCCCCTGTCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAATTATAGACTCCTGAGCAGCAGGTACCAATCTAGGCCCCTGTCC  848

seq1  TCAGGTGTGCCAGAAATGGGACGATCTTTTGTTTATTTCCCCAGGAGAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTGTGCCAGAAATGGGACGATCTTTTGTTTATTTCCCCAGGAGAAT  898

seq1  CTAGTTTTGATTTTAAGCTATTGCTGGCTGGAGAGGTAGGTGTGTGAATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTTGATTTTAAGCTATTGCTGGCTGGAGAGGTAGGTGTGTGAATT  948

seq1  C  950
      |
seq2  C  949