BAC Information

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BAC

Clone NameB6Ng01-263D04
Chromosome15 (Build37)
Map Location 22,236,076 - 22,237,147
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh12, LOC100040351
Downstream geneEG545091, Cdh18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263D04.bB6Ng01-263D04.g
ACCGA067426GA067427
length1,1571,135
definitionB6Ng01-263D04.b B6Ng01-263D04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataacgaatggctgacaagcacataaaaaattg
atcagcatccttaatcaccagggaaatgcaaatcaaaacaaccttgtgat
tccatctcacaccagtcagaaggtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcatccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctta
gaaaattggacatagtactactggaatatcccgcaatacctctcctgagc
atatatttagaacatgttccaactggtaagaaagacacatactccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggttggacctggagggcatcatcctgaatgaggtaacccaatcacaaa
aaattcaaatgatatgttctcactgataagtggatatttcctcagaaatt
tagagtacccaagatataatatactatttgcgaaacacatggaactcaag
aataaagaagagtaaagtgtggactcttttccccttcttaggtttgggaa
caaaacacccatggaaggagttacagagacaaagtttggatctgagacaa
aaggatggaccatctagagactgccatatccaaggatccattccataatc
agcctccaaatgtgacaccattgcatacactagcaagattttgctgaaag
gaccctgatatagctgtctcttgtgagactatgcctgggcttagcaaaca
cagaagtggatgctaacagtcacctcttggatggatcatagggcccccaa
tggaggagctagagaaagtaccgaaggagctaaattgaactgcaacccta
taggtagacacattattaactacagtacccagcagctcttgtctctagct
gcatatatatcaagatgctagtagccatcactggagagaggcatgacgtg
taacctttaattgccagttacaggtacgtaggtcaaaactgcattgctgc
taaggct
gaattctcacctgaggaataccgaatggcagagaagcaccttaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagaacaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggatttcaggcttgtacaaccactctggaaatcagtctggcggttcctca
ggaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatagccagaagatgtctcaaccggtaagtaggacacatgctccactat
gttcatagcagccttatttataataaccagaagctggaaagaacccagat
gccccccaacagaggaatggataagaaaatgaggtacatttacacaatgg
agtactactcagctattagaaagaatgaatttatgaaatttctagccaaa
tggatggacctgcagggcatcatcctgaatgaggtaacacattcacaaag
gaactcacacaatatgtactcactgttaagtggatattagcctgctatga
cttttacacaatatttataactactaattttggttagattcatttcacat
aattcaatatttaaatctgtatattgtaaattttttttgctaaaatccca
ttcttctttctctacactaaaggataaaatatggctttgtttgattgtct
tgaacagtactggattgcctttccacagggctctcaggcaagccacacac
ccttaatatttgcaatgggatatctttcaaaattatgaattattaatcaa
ttaataattagacataagaaaaataaaacatagtacaaaaatttacattt
acatatgtattctaaaattaaacactaacaatcccttttacatagactat
catatgagtccttcaaatgtttgcctatgaagaattactgtgtaaatagt
ttaaagctattattcaaaattaatgttagtttcctgaataataacagaat
actataccaaacatgtaatatttatgcctcctcaataagaaatgcgtacc
catccataacacccaccaacccagaaacctatcgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_22236076_22237147
seq2: B6Ng01-263D04.g_134_1200

seq1  CAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCA  50

seq1  GAATGGCTAAGAACAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCTAAGAACAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGT  100

seq1  GGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTTCAGGCTTGTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTTCAGGCTTGTACA  150

seq1  ACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGGAAATTGGACATAGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGGAAATTGGACATAGTAC  200

seq1  TACCGGAGGATCCAGCAATACCTCTCCTGGGCATATAGCCAGAAGATGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGGAGGATCCAGCAATACCTCTCCTGGGCATATAGCCAGAAGATGTC  250

seq1  TCAACCGGTAAGTAGGACACATGCTCCACTATGTTCATAGCAGCCTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCGGTAAGTAGGACACATGCTCCACTATGTTCATAGCAGCCTTATT  300

seq1  TATAATAACCAGAAGCTGGAAAGAACCCAGATGCCCCCCAACAGAGGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAACCAGAAGCTGGAAAGAACCCAGATGCCCCCCAACAGAGGAAT  350

seq1  GGATAAGAAAATGAGGTACATTTACACAATGGAGTACTACTCAGCTATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAGAAAATGAGGTACATTTACACAATGGAGTACTACTCAGCTATTA  400

seq1  GAAAGAATGAATTTATGAAATTTCTAGCCAAATGGATGGACCTGCAGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATGAATTTATGAAATTTCTAGCCAAATGGATGGACCTGCAGGGC  450

seq1  ATCATCCTGAATGAGGTAACACATTCACAAAGGAACTCACACAATATGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCTGAATGAGGTAACACATTCACAAAGGAACTCACACAATATGTA  500

seq1  CTCACTGTTAAGTGGATATTAGCCTGCTATGACTTTTACACAATATTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGTTAAGTGGATATTAGCCTGCTATGACTTTTACACAATATTTAT  550

seq1  AACTACTAATTTTGGTTAGATTCATTTCACATAATTCAATATTTAAATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACTAATTTTGGTTAGATTCATTTCACATAATTCAATATTTAAATCT  600

seq1  GTATATTGTAAATTTTTTTTGCTAAAATCCCATTCTTCTTTCTCTACACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTGTAAATTTTTTTTGCTAAAATCCCATTCTTCTTTCTCTACACT  650

seq1  AAAGGATAAAATATGGCTTTGTTTGATTGTCTTGAACAGTACTGGATTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATAAAATATGGCTTTGTTTGATTGTCTTGAACAGTACTGGATTGC  700

seq1  CTTTCCACAGGGCTCTCAGGCAAGCCACACACCCTTAATATTTGCAATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCACAGGGCTCTCAGGCAAGCCACACACCCTTAATATTTGCAATGG  750

seq1  GATATCTTTCAAAATTATGAATTATTAATCAATTAATAATTAGACATAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCTTTCAAAATTATGAATTATTAATCAATTAATAATTAGACATAAG  800

seq1  AAAAATAAAACATAGTACAAAAATTTACATTTACATATGTATTCTAAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAAACATAGTACAAAAATTTACATTTACATATGTATTCTAAAAT  850

seq1  TAAACACTAACAATCCCTTTTACATAGACTATCATATGAGTCCTTCAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACTAACAATCCCTTTTACATAGACTATCATATGAGTCCTTCAAAT  900

seq1  GTTTGCCTATG-AGAATTACTGTGTAAATAG-TTAAAGCTATTATTCCAA  948
      ||||||||||| ||||||||||||||||||| |||||||||||||| |||
seq2  GTTTGCCTATGAAGAATTACTGTGTAAATAGTTTAAAGCTATTATT-CAA  949

seq1  AATTAATGTTAGTTTCCTGAATAATAACAGAATACTATTAACAAACATGT  998
      ||||||||||||||||||||||||||||||||||||| || |||||||||
seq2  AATTAATGTTAGTTTCCTGAATAATAACAGAATACTA-TACCAAACATGT  998

seq1  AAATAATTTTATG-CTCCTTCATAAGAAATTGCGTACCCATCCCATAAAC  1047
       ||||  |||||| |||||  |||||||| ||||||||||| |||| |||
seq2  -AATA--TTTATGCCTCCTCAATAAGAAA-TGCGTACCCAT-CCAT-AAC  1042

seq1  AACCACCAAACCCAGACA-CTATCGC  1072
      | ||||| |||||||| | |||||||
seq2  ACCCACC-AACCCAGAAACCTATCGC  1067