BAC Information

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BAC

Clone NameB6Ng01-263J08
Chromosome15 (Build37)
Map Location 100,652,639 - 100,653,711
singlet/doubletsinglet
Overlap geneSlc4a8
Upstream geneLOC100042918, 1700030F18Rik, Gm920, D330037H05Rik, 4930478M13Rik, Dip2b, Atf1, 4930478A21Rik, EG432981, Mettl7a, ENSMUSG00000058057, LOC554292, Ubie, Yghl1-4, Slc11a2, EG432982, Letmd1, BC035295, Tcfcp2, Pou6f1, Dazap2, BC004728, Bin2, Ela1, Galnt6
Downstream geneScn8a, EG668225, Ankrd33, Acvrl1, Acvr1b, Grasp, Nr4a1, 9430023L20Rik, 6030408B16Rik, Krt80, Krt7, Krt85, Krt83, 1700011A15Rik, 5430421N21Rik, EG574415, Krt84, Krt82, 4732456N10Rik, Krt75, EG432985, EG432986, EG406223, EG432987, Krt6b, Krt6a, Krt5, Krt71, Krt74, Krt72, Krt73, Krt2, LOC100043001
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263J08.b
ACCGA067716
length1,066
definitionB6Ng01-263J08.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataaaatcattaattcatgtaaccttattatctcacgaatgtt
catcttccggttgatgttcaggaaacttgccccacagagtgggctaccac
ccagaagtggtcactcctagctacggaggcagtgagtgtcgcactatgtc
aagtacatgagggatatagcattgacaaacatgagaaggcacagcagtag
caagaagcatccctgggacgaacccccgaaggctggacatctccagggca
cacccacccttcatgtccaagcagagctgcaggctccagggcacacccac
ccatcacacccaatcatagctgcaagctccacggcacacccacccatcac
tgccaagcagagctgcaggctccagggcacaccctcccttcactgccaag
catatttgctagttccttggttcacccacccctgactcccttcctgagct
gcaggcctggctccattaagctcacttgcccactgccacaccccctgctt
ggtgttcaccgtcccttgaaggatataatcccactcggagctcctcgctg
tgccacagctaaggcggccgctgatgctcccaggagagggactggatggc
tatgttctgactggacaagttgatggactgagaatccttatgctcccatg
ctcacatgtattgatctccattcaccatgaacagaaaacacgtccacagg
ccatatataggcaaactttctactgtacatagaaatgactcttggtatct
gcctccaacagccttggtttttcaaggcagggtctcactgtgtagagcaa
gctagccttgaccttgctgtaactttcttgcctcccagccgctgggtcaa
gcatgcacaaccatacctggctttgcccttggtctctcttagcggactca
gttcttcttcagtacctttttctttgtggccagaaaggagaattcgtgaa
gtaatgcggtttggagtgcatgagaggatgccgtcttctcattcacaggc
ataattgtctagttctgtgctcagtgggatggattggatttgcgcgcggg
gagcgggtgggggggg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_100652639_100653711
seq2: B6Ng01-263J08.b_45_1110

seq1  GAATTCCATAAAATCATTAATTCATGTAAGCAGCATTATCTCAGGAATGT  50
      ||||||||||||||||||||||||||||| |   ||||||||| ||||||
seq2  GAATTCCATAAAATCATTAATTCATGTAA-CCTTATTATCTCACGAATGT  49

seq1  TCATCTTCAGGTTGATCTTCAGGAAACTTGCCCCACAGAGTGGGCTACCA  100
      |||||||| ||||||| |||||||||||||||||||||||||||||||||
seq2  TCATCTTCCGGTTGATGTTCAGGAAACTTGCCCCACAGAGTGGGCTACCA  99

seq1  CCCAGAAGTGGTCACTCCAGGCTACGGAGGCAGTGAGTGTCTCACTATGT  150
      ||||||||||||||||||  ||||||||||||||||||||| ||||||||
seq2  CCCAGAAGTGGTCACTCCTAGCTACGGAGGCAGTGAGTGTCGCACTATGT  149

seq1  CAAGTACATGAGGGATATAGCAGTGACAAACATGAGAAGGCACAGCAGTA  200
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAAGTACATGAGGGATATAGCATTGACAAACATGAGAAGGCACAGCAGTA  199

seq1  GCAAGAAGCATCCCTGGGACGAAGCCCCTAGGGCTGGACATCTCCAGGGC  250
      ||||||||||||||||||||||| |||| | |||||||||||||||||||
seq2  GCAAGAAGCATCCCTGGGACGAACCCCCGAAGGCTGGACATCTCCAGGGC  249

seq1  ACACCCACCCATCACAGCCAAGCAGAGCTGCAGGCTCCAGGGCACACCCA  300
      |||||||||| |||   |||||||||||||||||||||||||||||||||
seq2  ACACCCACCCTTCATGTCCAAGCAGAGCTGCAGGCTCCAGGGCACACCCA  299

seq1  CCCATCACAGCCAAGCAGAGCTGCAGGCTCCAGGGCACACCCACCCATCA  350
      ||||||||| |||| || ||||||| |||||| |||||||||||||||||
seq2  CCCATCACACCCAATCATAGCTGCAAGCTCCACGGCACACCCACCCATCA  349

seq1  CTGCCAAGCAGAGCTGCAGGCTCCAGGGCACACCCACCCATCACTGCCAA  400
      ||||||||||||||||||||||||||||||||||| ||| ||||||||||
seq2  CTGCCAAGCAGAGCTGCAGGCTCCAGGGCACACCCTCCCTTCACTGCCAA  399

seq1  GCAGAGCTGCAGGCTCCAGGGCACACCCACCCATCACAGCCAAGCAGAGC  450
      ||| |  |||  | |||  ||  ||||||||| | ||  ||   | ||||
seq2  GCATATTTGCTAGTTCCTTGGTTCACCCACCCCTGACTCCCTTCCTGAGC  449

seq1  TGCAGG-CTGGCTCCAGGAAGCTCACTTGCCCACTGCAGCTCCCCCTGCA  499
      |||||| |||||||||  |||||||||||||||||||  | |||||||| 
seq2  TGCAGGCCTGGCTCCATTAAGCTCACTTGCCCACTGCCACACCCCCTGCT  499

seq1  TGGCGTTCACCGTCCCTTGGAGGAAAGAATCCCACTCGGAGCTCCTCACT  549
      ||| ||||||||||||||| |||| | |||||||||||||||||||| ||
seq2  TGGTGTTCACCGTCCCTTGAAGGATATAATCCCACTCGGAGCTCCTCGCT  549

seq1  GTGCCACAGCTAAGGCGGCCGCTGATGCTCCCAGGAGAGGGACTGGATGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCACAGCTAAGGCGGCCGCTGATGCTCCCAGGAGAGGGACTGGATGG  599

seq1  CTATGTTCTGACGTGACAAGTTGAGGGACTGAGAATCCTTAAGCTCCCAT  649
      ||||||||||||  |||||||||| |||||||||||||||| ||||||||
seq2  CTATGTTCTGACTGGACAAGTTGATGGACTGAGAATCCTTATGCTCCCAT  649

seq1  GCTCACCTGTATTGATCTCCATTCACCGTAAACAGAAAAACACGTCCAGA  699
      |||||| |||||||||||||||||||| | ||||| |||||||||||| |
seq2  GCTCACATGTATTGATCTCCATTCACCATGAACAG-AAAACACGTCCACA  698

seq1  GGCCAAATAGAGGCAAACTTTCTACTGTAGATAAAAATGACTCTTGGTAT  749
      ||||| ||| ||||||||||||||||||| ||| ||||||||||||||||
seq2  GGCCATATATAGGCAAACTTTCTACTGTACATAGAAATGACTCTTGGTAT  748

seq1  CTGCCTCCAACAGCCTTGGTTTTTCAAGGCAGGGTCTCACTGTGTAGAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCAACAGCCTTGGTTTTTCAAGGCAGGGTCTCACTGTGTAGAGC  798

seq1  AAGCTAGCCTTGACCTTGCTGTAACTTTCTTGCCTCCCAGCCGCTGGGTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAGCCTTGACCTTGCTGTAACTTTCTTGCCTCCCAGCCGCTGGGTC  848

seq1  AAGCATGCACAACCATACCTGGCTTTGCCCTTGGTCTCTCTTAGGCGGAC  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAGCATGCACAACCATACCTGGCTTTGCCCTTGGTCTCTCTTA-GCGGAC  897

seq1  TCAGTTCTTCTTCAGTACCTTTTTCTTTGTGGCCAGAAAGGAGAATTCGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCTTCTTCAGTACCTTTTTCTTTGTGGCCAGAAAGGAGAATTCGT  947

seq1  GAAGTAATGCGGTTTGGAGTGCATGAGAGGAATGCCGTCTTCTCATTCAC  999
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAAGTAATGCGGTTTGGAGTGCATGAGAGG-ATGCCGTCTTCTCATTCAC  996

seq1  AGGCATAAATTGTCTTAGGTTCTGTGCTCAGTGGGAATGGATTGG-TTTG  1048
      |||||| ||||||||   ||||||||||||||||| ||||||||| ||||
seq2  AGGCAT-AATTGTCT--AGTTCTGTGCTCAGTGGG-ATGGATTGGATTTG  1042

seq1  CGCGCGGGGGAGCGGGGGGGGGGGG  1073
      ||||| |||||||||| ||||||||
seq2  CGCGC-GGGGAGCGGGTGGGGGGGG  1066