BAC Information

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BAC

Clone NameB6Ng01-263N12
Chromosome15 (Build37)
Map Location 69,991,728 - 69,992,922
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383050
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263N12.bB6Ng01-263N12.g
ACCGA067907GA067908
length1,1671,178
definitionB6Ng01-263N12.b B6Ng01-263N12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatctgtaaatgcacatcacaaccctgcctctacaagctccatc
tttaggcatgtctacttcacctttcctggacatctaactaggcaccagac
ctcccaaccttcttgtctagtgtgttcaaactttctattgcatgtataca
cctcatgccactttcttttcacctgttttgattattttccttggtggaaa
tatgactcttctgagccttctcgtaagtggtagagtaacctctgctcatt
ctttctactctgttattttctactttacatgtagtcatacaaccaaggtt
gtctcagaatactcaatgccacaagttattgcagttattttttattgttt
ctctgtatcattactgtgttctggaaagaatcaagaatattaatgacagg
tattggagagatggttcggtgatgaagagtaattgttgctttgcagaggt
ttaaaaattcatcctgaatgaggtatttcaatcacaaaagaacacacata
gtgtgaacttactgataagtggatattagcccaaaagtttggaataccca
agataaaattcacagaccgcataaagctcaagaaggaagacgaaagtgtg
ggtccttcggtccttcttagaaggtttaaaaaatactcatgggagtaaat
atggagacaaagtgtggagcagagcctgaaggaaaggccatccagagatg
gtctcacctggggatttatcccatatacagtcactgaacacagacactat
tgtgaatgccaagaagtgcttgctgacaggagcttgatatagctgtttcc
tgagaggctctgccagagcctgacatacagaggtggatattcacagccaa
ctattgaagtgatcatggtgtctccaatggaggagttagagaaatgactg
aagaagactaaggggtttgcaaccccataggaagaacaacaatattaaac
caatcagagctcccagcatctaaaccaaaaaccaaggagtacacatggag
ggactcatagctccagccatatatgtaacagagatggcccttgtctggtg
tcaatgggaaaagagcctgctacatgaagccttggatgctgcagattagg
atgtgagatttggtacaagagtcatggtggtgggatcacctcatgaagca
gaggtaattgggataag

aaaacatcaacaatagtcaatacaaaacaaaaccaaaaacacataactag
tcaaatctgctgaaaaaatgagcaattatgtgaacactcatttacagaag
tagcagaagcaatgaagaacaaatagaaaaaaattagtgtcattagtcat
cagcaaaatacactgagttgttctctagacccatgtagaatggtctttgt
caaggaggaaaataatcacaaatgcagagatggtttttgagcactcttac
atgttgttgatggcaatatgaactgcataacaggttctatagcaacagag
acctcacagttgaagagcagatcaaagagatgacccatatactctccttc
tggttaagtgttgaaaataatttatccagcataccaagaagacagctgca
accctgtgtttaattgcaggacctttacaagatatctaaaatataaataa
cttcagcctacactgttcaatattggatggatacaaagaaaaaaattatt
ggaaatacaattggatagactactaagttatagataaagaagattgaaat
cccatattttttagcaaaatgcaatgtttaaggggccaggatgttaagca
atataaggcaagtacagacagaaaaaacaaaacaaaacagaacacatcaa
cttttctctcatgtggagactaacatggacaatccaaatatgaaataatg
atttttagatttacagcacagatttggtaataaatcccaaaatagtcaca
acaatgcaagcacaatatatgttcactaatagtgggttgttggaaaattc
ataaaatcttttatttaaggtccatattaaggatgtatacagaccaaaaa
ttaaccaaataattatgtaattctttgatatatcctaacaagcatctgaa
agcattatgaaagtaatctttgggcataatttaaatgtaaaataatctta
aaaatatgaattttcaaatgatatcccaaaagtcctatagtaaaaatacc
taatttaaaaaaatacttctgttctgaaaaaaatatgatctcagacataa
acattagaagaaactatagaagatgaaaaacatgtcatttggatggtaaa
ccactaaactgtattccatggacagacgaatgaaattttctgaataaaca
cctctgccattgcctatatatatagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_69991728_69992922
seq2: B6Ng01-263N12.g_74_1251

seq1  AAAACATCAACAATAGTCAATACAAAACAAAACCAAAAACACATAACTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATCAACAATAGTCAATACAAAACAAAACCAAAAACACATAACTAG  50

seq1  TCAAATCTGCTGAAAAAATGAGCAATTATGTGAACACTCATTTACAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCTGCTGAAAAAATGAGCAATTATGTGAACACTCATTTACAGAAG  100

seq1  TAGCAGAAGCAATGAAGAACAAATAGAAAAAAATTAGTGTCATTAGTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGAAGCAATGAAGAACAAATAGAAAAAAATTAGTGTCATTAGTCAT  150

seq1  CAGCAAAATACACTGAGTTGTTCTCTAGACCCATGTAGAATGGTCTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAATACACTGAGTTGTTCTCTAGACCCATGTAGAATGGTCTTTGT  200

seq1  CAAGGAGGAAAATAATCACAAATGCAGAGATGGTTTTTGAGCACTCTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGGAAAATAATCACAAATGCAGAGATGGTTTTTGAGCACTCTTAC  250

seq1  ATGTTGTTGATGGCAATATGAACTGCATAACAGGTTCTATAGCAACAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTTGATGGCAATATGAACTGCATAACAGGTTCTATAGCAACAGAG  300

seq1  ACCTCACAGTTGAAGAGCAGATCAAAGAGATGACCCATATACTCTCCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACAGTTGAAGAGCAGATCAAAGAGATGACCCATATACTCTCCTTC  350

seq1  TGGTTAAGTGTTGAAAATAATTTATCCAGCATACCAAGAAGACAGCTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAAGTGTTGAAAATAATTTATCCAGCATACCAAGAAGACAGCTGCA  400

seq1  ACCCTGTGTTTAATTGCAGGACCTTTACAAGATATCTAAAATATAAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTGTTTAATTGCAGGACCTTTACAAGATATCTAAAATATAAATAA  450

seq1  CTTCAGCCTACACTGTTCAATATTGGATGGATACAAAGAAAAAAATTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCCTACACTGTTCAATATTGGATGGATACAAAGAAAAAAATTATT  500

seq1  GGAAATACAATTGGATAGACTACTAAGTTATAGATAAAGAAGATTGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATACAATTGGATAGACTACTAAGTTATAGATAAAGAAGATTGAAAT  550

seq1  CCCATATTTTTTAGCAAAATGCAATGTTTAAGGGGCCAGGATGTTAAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATTTTTTAGCAAAATGCAATGTTTAAGGGGCCAGGATGTTAAGCA  600

seq1  ATATAAGGCAAGTACAGACAGAAAAAACAAAACAAAACAGAACACATCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGGCAAGTACAGACAGAAAAAACAAAACAAAACAGAACACATCAA  650

seq1  CTTTTCTCTCATGTGGAGACTAACATGGACAATCCAAATATGAAATAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTCTCATGTGGAGACTAACATGGACAATCCAAATATGAAATAATG  700

seq1  ATTTTTAGATTTACAGCACAGATTTGGTAATAAATCCCAAAATAGTCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAGATTTACAGCACAGATTTGGTAATAAATCCCAAAATAGTCACA  750

seq1  ACAATGCAAGCACAATATATGTTCACTAATAGTGGGTTGTTGGAAAATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCAAGCACAATATATGTTCACTAATAGTGGGTTGTTGGAAAATTC  800

seq1  ATAAAATCTTTTATTTAAGGTCCATATTAAGGATGTATACAGACCAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATCTTTTATTTAAGGTCCATATTAAGGATGTATACAGACCAAAAA  850

seq1  TTAACCAAATAATTATGTAATTCTTTGATATATCCTAACAAAGCATCTGA  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTAACCAAATAATTATGTAATTCTTTGATATATCCTAAC-AAGCATCTGA  899

seq1  AAGCATTATGAAAGTAATCTTTGGGCATAATTTAAATGTAAAATAATCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTATGAAAGTAATCTTTGGGCATAATTTAAATGTAAAATAATCTT  949

seq1  AAAAATATGAATTTTCAAATGATATCCCAAAAGTCCTATAAGTAAAAATA  1000
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAAAATATGAATTTTCAAATGATATCCCAAAAGTCCTAT-AGTAAAAATA  998

seq1  CCTAATTT-AAAAAATACTTCTGTTCTGAAAAAAATATGAATTCTCAAGA  1049
      |||||||| |||||||||||||||||||||||||||||||  |||| |||
seq2  CCTAATTTAAAAAAATACTTCTGTTCTGAAAAAAATATGA--TCTC-AGA  1045

seq1  ACAATAAACATTAGAAGATACTATAAAGAAAGATAGAAAAACATGTCAAT  1099
         ||||||||||||||| ||||||    ||||| |||||||||||| ||
seq2  --CATAAACATTAGAAGAAACTATA---GAAGAT-GAAAAACATGTC-AT  1088

seq1  TTGGAATTGTAAACACACTAAAACTGTATTTCATGAGCAAAGACGAATAG  1149
      |||| || |||||| |||| |||||||||| |||  | | |||||||| |
seq2  TTGG-ATGGTAAAC-CACT-AAACTGTATTCCAT--GGACAGACGAAT-G  1132

seq1  AAATATTTTCTTTGAAATAAACA-CTCTGGCATTGC---TAT-TATAGAG  1194
      ||  |||||||    |||||||| ||||| ||||||   ||| |||||||
seq2  AA--ATTTTCT---GAATAAACACCTCTGCCATTGCCTATATATATAGAG  1177

seq1  G  1195
      |
seq2  G  1178


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