BAC Information

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BAC

Clone NameB6Ng01-264A12
Chromosome15 (Build37)
Map Location 26,123,851 - 26,204,936
singlet/doubletdoublet
Overlap genenone
Upstream gene4930445E18Rik, Basp1, EG432939, LOC100040583, Myo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622
Downstream geneAK162044, Fbxl7, LOC622531, LOC625311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264A12.bB6Ng01-264A12.g
ACCGA068046GA068047
length1,006542
definitionB6Ng01-264A12.b B6Ng01-264A12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,123,851 - 26,124,856)(26,204,395 - 26,204,936)
sequence
gaattccaaatgatttatatagacactcatgttcaagcacaatatccatt
cctactaatagcatcttattttcaggtatggaaagcaggtaggaaaagaa
agttatagcattctgacctggcaaatgtcttactagacagtcaatgttaa
aggtatatgctatttgacaaaagtgacatttgatcgctatagtctttgta
ctctaaacccaggacacaaatatttgaaaaaaacccaacaaccctctttt
ctattaatttttgagaatttcacataatgaatattgatcatattcacttc
tactcctcccagatccacacacctcttttcctttgccacgccatgttttc
ttttgaagcatggatgatctaccactatctgcctccttaaagaaaatggt
cttgacttcctccagaaacaattaattgtccataactcctcagctaggag
ttggggatcatggacctctttggaacctgtgatagaatgttcactggctt
gatcttgggcaggtagacacccacagctgtggttatattaagaaagcaat
ctgctcaagtccagactcatcctccctgacctctgacaagtacagtctcc
ccactccctgtcctgatgtgctttctgtactttgcagtggggagactctc
agtctcatcaggaaaaaaaatatcatgcaaattcagaggtagaacttgtt
acaaaatacctgacctcaaactgccaaattcataagcagtagtttgataa
tagccacaatcaagagaggtataagaaggcatgatgtctaagtttaggac
tggtattatctctatatttttataattgttttaatatgcgcagattaata
aaatttatacttgccttacaaatttttatcttttcacacaaattctatca
tgctgcaaatattcacccaaggcatcattatcttgttggaattatgactg
ttagagtttagattatttgtggcattggatactttgtgatgtgtgctgta
tgtgtg
gaattcttagtctggttatcaaaaggagttaggtgctatttactgtccac
tcaaagtgtgtgctgtttcatttaaactccttgttttcagtctctcatct
acacacaggagttctcagtcctagatttcctctgcttccccatttttcat
agaataacgtattctctctggccaaaagagtataaatccaggcagaaata
caatgtgggagcaggcttgggggtcactgcttcatataaatatttgctga
caatatttctgtgtctgtcccacacagatccattttgcagatccatttta
ctcacaactttctatctctccaaactcctactccaggtcttctgtgatga
acctcaacttgactccctccatcttacacttcactttcccctgtgtggct
aatactcttattatttgccattttcttcctgactttccaaaactgtattg
ctgttaagcttacacctagaccttttaactcgtagaatttgttaagtttc
cttcccacttgaatatagagattccctccctccctccctccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_26123851_26124856
seq2: B6Ng01-264A12.b_45_1050

seq1  GAATTCCAAATGATTTATATAGACACTCATGTTCAAGCACAATATCCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATGATTTATATAGACACTCATGTTCAAGCACAATATCCATT  50

seq1  CCTACTAATAGCATCTTATTTTCAGGTATGGAAAGCAGGTAGGAAAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTAATAGCATCTTATTTTCAGGTATGGAAAGCAGGTAGGAAAAGAA  100

seq1  AGTTATAGCATTCTGACCTGGCAAATGTCTTACTAGACAGTCAATGTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATAGCATTCTGACCTGGCAAATGTCTTACTAGACAGTCAATGTTAA  150

seq1  AGGTATATGCTATTTGACAAAAGTGACATTTGATCGCTATAGTCTTTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATATGCTATTTGACAAAAGTGACATTTGATCGCTATAGTCTTTGTA  200

seq1  CTCTAAACCCAGGACACAAATATTTGAAAAAAACCCAACAACCCTCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAACCCAGGACACAAATATTTGAAAAAAACCCAACAACCCTCTTTT  250

seq1  CTATTAATTTTTGAGAATTTCACATAATGAATATTGATCATATTCACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAATTTTTGAGAATTTCACATAATGAATATTGATCATATTCACTTC  300

seq1  TACTCCTCCCAGATCCACACACCTCTTTTCCTTTGCCACGCCATGTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCTCCCAGATCCACACACCTCTTTTCCTTTGCCACGCCATGTTTTC  350

seq1  TTTTGAAGCATGGATGATCTACCACTATCTGCCTCCTTAAAGAAAATGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAGCATGGATGATCTACCACTATCTGCCTCCTTAAAGAAAATGGT  400

seq1  CTTGACTTCCTCCAGAAACAATTAATTGTCCATAACTCCTCAGCTAGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACTTCCTCCAGAAACAATTAATTGTCCATAACTCCTCAGCTAGGAG  450

seq1  TTGGGGATCATGGACCTCTTTGGAACCTGTGATAGAATGTTCACTGGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGATCATGGACCTCTTTGGAACCTGTGATAGAATGTTCACTGGCTT  500

seq1  GATCTTGGGCAGGTAGACACCCACAGCTGTGGTTATATTAAGAAAGCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTGGGCAGGTAGACACCCACAGCTGTGGTTATATTAAGAAAGCAAT  550

seq1  CTGCTCAAGTCCAGACTCATCCTCCCTGACCTCTGACAAGTACAGTCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCAAGTCCAGACTCATCCTCCCTGACCTCTGACAAGTACAGTCTCC  600

seq1  CCACTCCCTGTCCTGATGTGCTTTCTGTACTTTGCAGTGGGGAGACTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCCTGTCCTGATGTGCTTTCTGTACTTTGCAGTGGGGAGACTCTC  650

seq1  AGTCTCATCAGGAAAAAAAATATCATGCAAATTCAGAGGTAGAACTTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCATCAGGAAAAAAAATATCATGCAAATTCAGAGGTAGAACTTGTT  700

seq1  ACAAAATACCTGACCTCAAACTGCCAAATTCATAAGCAGTAGTTTGATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATACCTGACCTCAAACTGCCAAATTCATAAGCAGTAGTTTGATAA  750

seq1  TAGCCACAATCAAGAGAGGTATAAGAAGGCATGATGTCTAAGTTTAGGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACAATCAAGAGAGGTATAAGAAGGCATGATGTCTAAGTTTAGGAC  800

seq1  TGGTATTATCTCTATATTTTTATAATTGTTTTAATATGCGCAGATTAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTATCTCTATATTTTTATAATTGTTTTAATATGCGCAGATTAATA  850

seq1  AAATTTATACTTGCCTTACAAA-TTTTATCTTTTCACACAAATTCTATCA  899
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAATTTATACTTGCCTTACAAATTTTTATCTTTTCACACAAATTCTATCA  900

seq1  TGCTGCAAATATTCACCCAAGGCATCATTATCTTGTTGGAATTATGACTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCAAATATTCACCCAAGGCATCATTATCTTGTTGGAATTATGACTG  950

seq1  TTTAGAGTTTAGATTATTTGTGGCATTGGATACTTTGGGATGGTGTG-TG  998
       |||||||||||||||||||||||||||||||||||| ||| ||||| ||
seq2  -TTAGAGTTTAGATTATTTGTGGCATTGGATACTTTGTGAT-GTGTGCTG  998

seq1  TATGTGTG  1006
      ||||||||
seq2  TATGTGTG  1006

seq1: chr15_26204395_26204936
seq2: B6Ng01-264A12.g_70_611 (reverse)

seq1  GGGAGGGAGGGAGGGAGGGAATCTCTATATTCAAGTGGGAAGGAAACTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGAGGGAGGGAGGGAATCTCTATATTCAAGTGGGAAGGAAACTTA  50

seq1  ACAAATTCTACGAGTTAAAAGGTCTAGGTGTAAGCTTAACAGCAATACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTCTACGAGTTAAAAGGTCTAGGTGTAAGCTTAACAGCAATACAG  100

seq1  TTTTGGAAAGTCAGGAAGAAAATGGCAAATAATAAGAGTATTAGCCACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAAAGTCAGGAAGAAAATGGCAAATAATAAGAGTATTAGCCACAC  150

seq1  AGGGGAAAGTGAAGTGTAAGATGGAGGGAGTCAAGTTGAGGTTCATCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAAGTGAAGTGTAAGATGGAGGGAGTCAAGTTGAGGTTCATCACA  200

seq1  GAAGACCTGGAGTAGGAGTTTGGAGAGATAGAAAGTTGTGAGTAAAATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCTGGAGTAGGAGTTTGGAGAGATAGAAAGTTGTGAGTAAAATGG  250

seq1  ATCTGCAAAATGGATCTGTGTGGGACAGACACAGAAATATTGTCAGCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCAAAATGGATCTGTGTGGGACAGACACAGAAATATTGTCAGCAAA  300

seq1  TATTTATATGAAGCAGTGACCCCCAAGCCTGCTCCCACATTGTATTTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATATGAAGCAGTGACCCCCAAGCCTGCTCCCACATTGTATTTCTG  350

seq1  CCTGGATTTATACTCTTTTGGCCAGAGAGAATACGTTATTCTATGAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATTTATACTCTTTTGGCCAGAGAGAATACGTTATTCTATGAAAAA  400

seq1  TGGGGAAGCAGAGGAAATCTAGGACTGAGAACTCCTGTGTGTAGATGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAAGCAGAGGAAATCTAGGACTGAGAACTCCTGTGTGTAGATGAGA  450

seq1  GACTGAAAACAAGGAGTTTAAATGAAACAGCACACACTTTGAGTGGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAAAACAAGGAGTTTAAATGAAACAGCACACACTTTGAGTGGACAG  500

seq1  TAAATAGCACCTAACTCCTTTTGATAACCAGACTAAGAATTC  542
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGCACCTAACTCCTTTTGATAACCAGACTAAGAATTC  542