BAC Information

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BAC

Clone NameB6Ng01-265P15
Chromosome15 (Build37)
Map Location 88,996,080 - 89,147,304
singlet/doubletdoublet
Overlap genePlxnb2, LOC100043185, 1700027J05Rik, Saps2, Sbf1
Upstream geneZdhhc25, Brd1, Zbed4, Alg12, Creld2, Pim3, 1700019P01Rik, Mlc1, LOC667558, Mov10l1, Panx2, Trabd, 1300018J18Rik, Hdac10, Mapk12, Mapk11
Downstream geneAdm2, Miox, Tmem112b, Ncaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik, Mapk8ip2, Arsa, Shank3, Acr, Rabl2a, LOC676575, Syt10, Alg10b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265P15.bB6Ng01-265P15.g
ACCGA069487GA069488
length8911,098
definitionB6Ng01-265P15.b B6Ng01-265P15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,996,080 - 88,996,969)(89,146,182 - 89,147,304)
sequence
gaattccaccccgccctgcacagcactcacagcctgccacctgtcacacg
cacctctccttgggcccgccggctcatgttctgtggaaaggcatcagtga
tggccacacaggacttctcccggctccacagccagtgtccggtttcctcg
gcccgtgagcactcggacttcctggtgcatctgcaaggacagagagtact
ctcagctccggcactccttgggctctgggccgttcgggcaaggacaaact
gctcaccgtccctcgatgacacaccagccacagtagggatcttgggagtc
acgacactgagcgcaggttacatagctcaggcattcttgtactgggagcc
ggaacacctagaggtaagatagcagggccgtgggggaacaggacttacta
gacacccccaccccacccccatccctggtgttagactgttcagggacaag
tggccaggactctcctgggccagaccacctacaagtttagggcaggatca
gaaaagagagaaggaagattacagatgtagctcagtgacgtggctcttgc
ctggcaggcataagatcctacttctaattcctaatgcccaaaataaaacc
cttgggaagatagcaatggtgctatgaagactcagagacaggagcccaga
ctccgcccaaccatccaaagcaaggcccagtttcacagggcctcctgggg
ccatctttaggctgaccttgtcctgggtcatagcatacagactggacagg
tttccagacagtgccaggtcctgcttgattttcttattgatgtctactgg
gatagaaccatactctgcagaagtgccgtctggagcaaggtacacctgcc
aacaccaagacggtccatgagaacggggtggggggtggggg
gaattcaggacctccagaagagcagtcagtgctcttaacctctgagccat
ctctccagccccctgccaccatttcttacgagtatagagacgagttttag
ttgattgacagaagcagccaactcaatcaagttcaaacacaggttttaag
cagaaaggaagattttgcagctcacctggcattggcaaaggagagctagg
tttgtgtctctgtgcacagaactttcctaggacagtcttttcctcttccc
ctcttttatttatttttattttatcttatttttttcaagacagggcttcc
tggctgttctggaactagctccgtagaccaggctggcttcaaactccatc
tgcttctgactcccaagcgctttaattaaaggcgtgcgctgccaccacca
ccatgaccaccaagctcatccccctctcttaaaaaagacattttcacttt
atgtgtatgggtgttttccctgcatgtatgtccacgcaccaccacaaaca
cgttccggaggccagaagggggcgacagatccccctggacccagaattgc
aggcgagggtgctgcaaatccagcacagattcccataacctctaaactat
ctctccagaaaggcccttatatctcctgttttttggacacatggtttcct
gatgaagccaaggagactggactggaattcatgaacgacctgcttcagct
tctcaagggccgagactctttatacacgtacactgacgactggactcgtc
tctcctgagattgctttcattcattctccagatcttgcaggtggagggaa
cacgatgctaataggtggcttgtctttcagttctcacagaaaactaaact
catcaacaagcaagcctagtcctccccctttaatctcctggtcaaggacc
ttgcctctcctacagtgtccattcctgtattactgcaagaggcctggcaa
ccccctgacctccaggcgatcactcgcagaggtgactcaagctggaactt
ttttttttttttttaaatgcagtgtgatatccatcattcatgtgaatatt
ctagctgccctttggcactagactgaaaaaaaagcctgtaagtctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_88996080_88996969
seq2: B6Ng01-265P15.b_49_939

seq1  GAATTCCACCCCGCCCTGCACAGCACTCACAGCCTGCCACCTGTCACACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCCCGCCCTGCACAGCACTCACAGCCTGCCACCTGTCACACG  50

seq1  CACCTCTCCTTGGGCCCGCCGGCTCATGTTCTGTGGAAAGGCATCAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTCCTTGGGCCCGCCGGCTCATGTTCTGTGGAAAGGCATCAGTGA  100

seq1  TGGCCACACAGGACTTCTCCCGGCTCCACAGCCAGTGTCCGGTTTCCTCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACACAGGACTTCTCCCGGCTCCACAGCCAGTGTCCGGTTTCCTCG  150

seq1  GCCCGTGAGCACTCGGACTTCCTGGTGCATCTGCAAGGACAGAGAGTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGTGAGCACTCGGACTTCCTGGTGCATCTGCAAGGACAGAGAGTACT  200

seq1  CTCAGCTCCGGCACTCCTTGGGCTCTGGGCCGTTCGGGCAAGGACAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTCCGGCACTCCTTGGGCTCTGGGCCGTTCGGGCAAGGACAAACT  250

seq1  GCTCACCGTCCCTCGATGACACACCAGCCACAGTAGGGATCTTGGGAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACCGTCCCTCGATGACACACCAGCCACAGTAGGGATCTTGGGAGTC  300

seq1  ACGACACTGAGCGCAGGTTACATAGCTCAGGCATTCTTGTACTGGGAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACACTGAGCGCAGGTTACATAGCTCAGGCATTCTTGTACTGGGAGCC  350

seq1  GGAACACCTAGAGGTAAGATAGCAGGGCCGTGGGGGAACAGGACTTACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACCTAGAGGTAAGATAGCAGGGCCGTGGGGGAACAGGACTTACTA  400

seq1  GACACCCCCACCCCACCCCCATCCCTGGTGTTAGACTGTTCAGGGACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCCCCACCCCACCCCCATCCCTGGTGTTAGACTGTTCAGGGACAAG  450

seq1  TGGCCAGGACTCTCCTGGGCCAGACCACCTACAAGTTTAGGGCAGGATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGGACTCTCCTGGGCCAGACCACCTACAAGTTTAGGGCAGGATCA  500

seq1  GAAAAGAGAGAAGGAAGATTACAGATGTAGCTCAGTGACGTGGCTCTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAGAGAAGGAAGATTACAGATGTAGCTCAGTGACGTGGCTCTTGC  550

seq1  CTGGCAGGCATAAGATCCTACTTCTAATTCCTAATGCCCAAAATAAAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGGCATAAGATCCTACTTCTAATTCCTAATGCCCAAAATAAAACC  600

seq1  CTTGGGAAGATAGCAATGGTGCTATGAAGACTCAGAGACAGGAGCCCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGAAGATAGCAATGGTGCTATGAAGACTCAGAGACAGGAGCCCAGA  650

seq1  CTCCGCCCAACCATCCAAAGCAAGGCCCAGTTTCACAGGGCCTCCTGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGCCCAACCATCCAAAGCAAGGCCCAGTTTCACAGGGCCTCCTGGGG  700

seq1  CCATCTTTAGGCTGACCTTGTCCTGGGTCATAGCATACAGACTGGACAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTTAGGCTGACCTTGTCCTGGGTCATAGCATACAGACTGGACAGG  750

seq1  TTTCCAGACAGTGCCAGGTCCTGCTTGATTTTCTTATTGATGTCTACTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGACAGTGCCAGGTCCTGCTTGATTTTCTTATTGATGTCTACTGG  800

seq1  GATAGAACCATACTCTGCAGAAGTGCCGTCTGGAGCAAGGTACACCTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAACCATACTCTGCAGAAGTGCCGTCTGGAGCAAGGTACACCTGCC  850

seq1  AACACCAAGACGGTCCATGAGAACGGGGT-GGGGGTGGGGG  890
      ||||||||||||||||||||||||||||| |||||||||||
seq2  AACACCAAGACGGTCCATGAGAACGGGGTGGGGGGTGGGGG  891

seq1: chr15_89146182_89147304
seq2: B6Ng01-265P15.g_71_1168 (reverse)

seq1  GAAAGACTTTACAGGCTTTTTTTTTTTAAGTTCCTAGTGCAAAAAGGGGC  50
      ||||||| ||||||||   |||||||| |||  ||||||| |||  ||||
seq2  GAAAGAC-TTACAGGC---TTTTTTTTCAGT--CTAGTGCCAAA--GGGC  42

seq1  AGCTAGATATTTCACCATTGGATGGATG--GGATATCCAACACCTGCATT  98
      |||||||   |||||      ||| |||  |||||||  ||| |||||||
seq2  AGCTAGAATATTCAC------ATGAATGATGGATATC--ACA-CTGCATT  83

seq1  TAAAAAAAAAAAAAAAAAAGTTCCAGCTTGAGTCACCTTCCTGCGAAGTT  148
      |  |||||||||||||||||||||||||||||||||||  ||||| ||| 
seq2  T--AAAAAAAAAAAAAAAAGTTCCAGCTTGAGTCACCT--CTGCG-AGT-  127

seq1  GGATCGCCCTGGAGGTCAGGGGGTTGGCCAGGCCTCTTGCAGTAATACAG  198
       ||||| |||||||||||||||||| ||||||||||||||||||||||||
seq2  -GATCG-CCTGGAGGTCAGGGGGTT-GCCAGGCCTCTTGCAGTAATACAG  174

seq1  GAATGGACACTTGTAGGAGAGGCAAGGTCCTTGACCAGGAGATTAAAGGG  248
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAATGGACAC-TGTAGGAGAGGCAAGGTCCTTGACCAGGAGATTAAAGGG  223

seq1  GGAGGACTAGGCTTGCTTGTTGATGAGTTTAGTTTTCTGTGAGAACTGAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGACTAGGCTTGCTTGTTGATGAGTTTAGTTTTCTGTGAGAACTGAA  273

seq1  AGACAAGCCACCTATTAGCATCGTGTTCCCTCCACCTGCAAGATCTGGAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGCCACCTATTAGCATCGTGTTCCCTCCACCTGCAAGATCTGGAG  323

seq1  AATGAATGAAAGCAATCTCAGGAGAGACGAGTCCAGTCGTCAGTGTACGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATGAAAGCAATCTCAGGAGAGACGAGTCCAGTCGTCAGTGTACGT  373

seq1  GTATAAAGAGTCTCGGCCCTTGAGAAGCTGAAGCAGGTCGTTCATGAATT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAAGAGTCTCGGCCCTTGAGAAGCTGAAGCAGGTCGTTCATGAATT  423

seq1  CCAGTCCAGTCTCCTTGGCTTCATCAGGAAACCATGTGTCCAAAAAACAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCCAGTCTCCTTGGCTTCATCAGGAAACCATGTGTCCAAAAAACAG  473

seq1  GAGATATAAGGGCCTTTCTGGAGAGATAGTTTAGAGGTTATGGGAATCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATATAAGGGCCTTTCTGGAGAGATAGTTTAGAGGTTATGGGAATCTG  523

seq1  TGCTGGATTTGCAGCACCCTCGCCTGCAATTCTGGGTCCAGGGGGATCTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGATTTGCAGCACCCTCGCCTGCAATTCTGGGTCCAGGGGGATCTG  573

seq1  TCGCCCCCTTCTGGCCTCCGGAACGTGTTTGTGGTGGTGCGTGGACATAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCCCCTTCTGGCCTCCGGAACGTGTTTGTGGTGGTGCGTGGACATAC  623

seq1  ATGCAGGGAAAACACCCATACACATAAAGTGAAAATGTCTTTTTTAAGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGGAAAACACCCATACACATAAAGTGAAAATGTCTTTTTTAAGAG  673

seq1  AGGGGGATGAGCTTGGTGGTCATGGTGGTGGTGGCAGCGCACGCCTTTAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGATGAGCTTGGTGGTCATGGTGGTGGTGGCAGCGCACGCCTTTAA  723

seq1  TTAAAGCGCTTGGGAGTCAGAAGCAGATGGAGTTTGAAGCCAGCCTGGTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCGCTTGGGAGTCAGAAGCAGATGGAGTTTGAAGCCAGCCTGGTC  773

seq1  TACGGAGCTAGTTCCAGAACAGCCAGGAAGCCCTGTCTTGAAAAAAATAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGAGCTAGTTCCAGAACAGCCAGGAAGCCCTGTCTTGAAAAAAATAA  823

seq1  GATAAAATAAAAATAAATAAAAGAGGGGAAGAGGAAAAGACTGTCCTAGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAATAAAAATAAATAAAAGAGGGGAAGAGGAAAAGACTGTCCTAGG  873

seq1  AAAGTTCTGTGCACAGAGACACAAACCTAGCTCTCCTTTGCCAATGCCAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCTGTGCACAGAGACACAAACCTAGCTCTCCTTTGCCAATGCCAG  923

seq1  GTGAGCTGCAAAATCTTCCTTTCTGCTTAAAACCTGTGTTTGAACTTGAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTGCAAAATCTTCCTTTCTGCTTAAAACCTGTGTTTGAACTTGAT  973

seq1  TGAGTTGGCTGCTTCTGTCAATCAACTAAAACTCGTCTCTATACTCGTAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGGCTGCTTCTGTCAATCAACTAAAACTCGTCTCTATACTCGTAA  1023

seq1  GAAATGGTGGCAGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGTGGCAGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGA  1073

seq1  CTGCTCTTCTGGAGGTCCTGAATTC  1123
      |||||||||||||||||||||||||
seq2  CTGCTCTTCTGGAGGTCCTGAATTC  1098