BAC Information

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BAC

Clone NameB6Ng01-267H07
Chromosome15 (Build37)
Map Location 23,205,427 - 23,367,223
singlet/doubletdoublet
Overlap genenone
Upstream geneEG545091, Cdh18
Downstream geneLOC624863, LOC666989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267H07.bB6Ng01-267H07.g
ACCGA070570GA070571
length1,1921,121
definitionB6Ng01-267H07.b B6Ng01-267H07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,366,026 - 23,367,223)(23,205,427 - 23,206,556)
sequence
gaattctccattgtgatgtaaattgaggcagcaagtaattctatgagact
caatcgatttctatgccttgcctgagaacaagaatgctattgttctgaca
ctcttctggtctctaagaaaacccaaggacgtcatgcatttgtttgtgtg
agtcacagcaaccaaggaaatccctgcacctcgctttgggtgtgagttat
tttgtcatagtgcttgtaagattgtaggatggatgctcacttccactggt
ttgcttgcctcggcgactccagctatccttcacctgtatctcttttaatg
gaggccaacgtttattgagcctctgtctctgtctgtcttttacttactct
cctcatcctatatagcatagaggttttttacagtgtaaacacaccatctc
ctctctctctgtgtctctctgtctctgtctctgtctctctctctcacaca
cacacaaacacacacacacacaagtatacaagcacctttcataaccagta
tctcatcatatgtgtcacttctttagagtcccaaaatgatatgatctgta
ctctcttcccagataagatctctaagcttcctcagaccatgagaagacag
tgtttgcttctcactgaatgtaggactgtacctagaccattcaagacaat
tttattggcatgatgaatgaatcatacctaaatgagctcactgttccgaa
ttacattgtgatttggggaaaattcattttgtaggatgctcaaaagttat
ctattagtttttaaaaccttataaaatggttgccactgaacataaaaatg
acactgagggatttgggggataatagctagcaataatagaagtaaagctg
cttattttcttccactcagacggtaggaagaaaagaattaacttacctga
ccaggcttagaattctcacagacaacaatatcatattccctgggcaagtt
caagtggattgtcattgacatccaggaacttctaatacccacggagacat
gctcagcaaatcagattgtctgcaaaacaacacagggatgtattagtatt
tcaacacacactttagagacttggcttacaataaatctctatgctgtagc
tgcctctagctctgaatgcgtagcagtctgtggcaaagaacaactttatg
accattgttctgtttgaactcatttaacggtacggagaaatg

gaattctctgcctatactactgctttggatttcaaagtaatcttacttaa
gtctcactattcccactactgagcaaaaagctttcaaattatctgaatgc
tttctgaaataaacaagtactgaacttttattcttagatcattttctttg
tatcaaaatcatgattcctatttttagattcctagttttagagaactaca
gagtaaaatattattctaatgatttaatatattaatgtgacaagatacta
actagatactgaattagtcttgcataaagttatacatatttttctgtttt
gggtaatataagggaatacgttcgttcacactttaagagttcaacacaag
tttcttataacaaacaatatgactacagtaaaaagaattgaatatttaat
acacaaccctaaatgggaaacaatattttaaaaattcatttcttttatat
aggtaaattaacatcaactatgtgaaatattgaattgacattgatctata
gctaattgtccttaaaaataaatggggtaatttagtttcattttgttttt
gaaacatcagtacaccacctgtagcaactgctaaatactgaggacatata
tatgaaaagaatgataggttttatatatgagagagtgtttgttttgaaac
tcaacatattttctgattttgtcaagaaaaaagtagtttattttatatat
aagctgctggttccagtttttaaaataagtcaggtataaataactcatat
aagaatcatctcagctgatctcttcattcaaataataattgttgttttcc
caggatgtcaacaattctgtattaaatgttaaaattgttctgctaataag
ataaaaccagcaattgcttttttggtatatgttcctcttcagaaccattt
acattttccaaaaatgaaatacaggatagcgaagcacattcaaattggtt
ggaattaagaatggtcatattccttcagaagaaagaataaaaactatctg
atcctcatcagaaatactttaaaatagcaagtctatcagtttattgatac
agcaggggcagtgcagtgatcactggaacaatattatcatgctcacgaca
ggatcaatctaaaaatacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_23366026_23367223
seq2: B6Ng01-267H07.b_41_1232 (reverse)

seq1  CATTTCTCTGTA-CGTT-AATGAGTTCTAACAGGAACAATGTTCATAAAG  48
      |||||||| ||| |||| ||||||||| |||| |||||||| ||||||||
seq2  CATTTCTCCGTACCGTTAAATGAGTTCAAACA-GAACAATGGTCATAAAG  49

seq1  TTGTCTTTTGCCAACAGACCTGCTACGGCATTCAGAGCTAGAGGCAAGCT  98
      ||||  |||||| ||||| ||||||| |||||||||||||||||| ||||
seq2  TTGTTCTTTGCC-ACAGA-CTGCTAC-GCATTCAGAGCTAGAGGC-AGCT  95

seq1  ACAGCATTAAGGAGATTTATTGTAAGCCAAGTCTCTAAAGTGTGTGTTGA  148
      |||||||    |||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAT---AGAGATTTATTGTAAGCCAAGTCTCTAAAGTGTGTGTTGA  142

seq1  AATACTAAATACATCCCTGTG-TGTTTTGCAGACAATCCTGATTTGCTGA  197
      |||||| |||||||||||||| ||||||||||||||| ||||||||||||
seq2  AATACT-AATACATCCCTGTGTTGTTTTGCAGACAAT-CTGATTTGCTGA  190

seq1  GCCATGTCTCCGTGGGTATTAG-AGTT-CTGGATGTCAATGACAATCCAC  245
      | |||||||||||||||||||| |||| ||||||||||||||||||||||
seq2  G-CATGTCTCCGTGGGTATTAGAAGTTCCTGGATGTCAATGACAATCCAC  239

seq1  CTGAACTTG-CCAGGGAATATGATATTGTTGTCTGTGAGAATTCTAAGCC  294
       |||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTTGCCCAGGGAATATGATATTGTTGTCTGTGAGAATTCTAAGCC  289

seq1  TGGTCAGGTAAGTTAATTCTTTTCTTCCTACCGTCTGAGTGGAAGAAAAA  344
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGGTCAGGTAAGTTAATTCTTTTCTTCCTACCGTCTGAGTGGAAG-AAAA  338

seq1  TAAGCAGCTTTACTTCTATTATTGCTAGCTATTATCCCCCAAATCCCTCA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGCTTTACTTCTATTATTGCTAGCTATTATCCCCCAAATCCCTCA  388

seq1  GTGTCATTTTTATGTTCAGTGGCAACCATTTTATAAGGTTTTAAAAACTA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCATTTTTATGTTCAGTGGCAACCATTTTATAAGGTTTTAAAAACTA  438

seq1  ATAGATAACTTTTGAGCATCCTACAAAATGAATTTTCCCCAAATCACAAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAACTTTTGAGCATCCTACAAAATGAATTTTCCCCAAATCACAAT  488

seq1  GTAATTCGGAACAGTGAGCTCATTTAGGTATGATTCATTCATCATGCCAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCGGAACAGTGAGCTCATTTAGGTATGATTCATTCATCATGCCAA  538

seq1  TAAAATTGTCTTGAATGGTCTAGGTACAGTCCTACATTCAGTGAGAAGCA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTGTCTTGAATGGTCTAGGTACAGTCCTACATTCAGTGAGAAGCA  588

seq1  AACACTGTCTTCTCATGGTCTGAGGAAGCTTAGAGATCTTATCTGGGAAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGTCTTCTCATGGTCTGAGGAAGCTTAGAGATCTTATCTGGGAAG  638

seq1  AGAGTACAGATCATATCATTTTGGGACTCTAAAGAAGTGACACATATGAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTACAGATCATATCATTTTGGGACTCTAAAGAAGTGACACATATGAT  688

seq1  GAGATACTGGTTATGAAAGGTGCTTGTATACTTGTGTGTGTGTGTGTTTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACTGGTTATGAAAGGTGCTTGTATACTTGTGTGTGTGTGTGTTTG  738

seq1  TGTGTGTGTGAGAGAGAGAGACAGAGACAGAGACAGAGAGACACAGAGAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGAGAGAGAGAGACAGAGACAGAGACAGAGAGACACAGAGAG  788

seq1  AGAGGAGATGGTGTGTTTACACTGTAAAAAACCTCTATGCTATATAGGAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGATGGTGTGTTTACACTGTAAAAAACCTCTATGCTATATAGGAT  838

seq1  GAGGAGAGTAAGTAAAAGACAGACAGAGACAGAGGCTCAATAAACGTTGG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGAGTAAGTAAAAGACAGACAGAGACAGAGGCTCAATAAACGTTGG  888

seq1  CCTCCATTAAAAGAGATACAGGTGAAGGATAGCTGGAGTCGCCGAGGCAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATTAAAAGAGATACAGGTGAAGGATAGCTGGAGTCGCCGAGGCAA  938

seq1  GCAAACCAGTGGAAGTGAGCATCCATCCTACAATCTTACAAGCACTATGA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACCAGTGGAAGTGAGCATCCATCCTACAATCTTACAAGCACTATGA  988

seq1  CAAAATAACTCACACCCAAAGCGAGGTGCAGGGATTTCCTTGGTTGCTGT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAACTCACACCCAAAGCGAGGTGCAGGGATTTCCTTGGTTGCTGT  1038

seq1  GACTCACACAAACAAATGCATGACGTCCTTGGGTTTTCTTAGAGACCAGA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCACACAAACAAATGCATGACGTCCTTGGGTTTTCTTAGAGACCAGA  1088

seq1  AGAGTGTCAGAACAATAGCATTCTTGTTCTCAGGCAAGGCATAGAAATCG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTCAGAACAATAGCATTCTTGTTCTCAGGCAAGGCATAGAAATCG  1138

seq1  ATTGAGTCTCATAGAATTACTTGCTGCCTCAATTTACATCACAATGGAGA  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTCTCATAGAATTACTTGCTGCCTCAATTTACATCACAATGGAGA  1188

seq1  ATTC  1198
      ||||
seq2  ATTC  1192


seq1: chr15_23205427_23206556
seq2: B6Ng01-267H07.g_67_1187

seq1  GAATTCTCTGCCTATACTACTGCTTTGGATTTCAAAGTAATCTTACTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCCTATACTACTGCTTTGGATTTCAAAGTAATCTTACTTAA  50

seq1  GTCTCACTATTCCCACTACTGAGCAAAAAGCTTTCAAATTATCTGAATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACTATTCCCACTACTGAGCAAAAAGCTTTCAAATTATCTGAATGC  100

seq1  TTTCTGAAATAAACAAGTACTGAACTTTTATTCTTAGATCATTTTCTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAAATAAACAAGTACTGAACTTTTATTCTTAGATCATTTTCTTTG  150

seq1  TATCAAAATCATGATTCCTATTTTTAGATTCCTAGTTTTAGAGAACTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAATCATGATTCCTATTTTTAGATTCCTAGTTTTAGAGAACTACA  200

seq1  GAGTAAAATATTATTCTAATGATTTAATATATTAATGTGACAAGATACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAAATATTATTCTAATGATTTAATATATTAATGTGACAAGATACTA  250

seq1  ACTAGATACTGAATTAGTCTTGCATAAAGTTATACATATTTTTCTGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGATACTGAATTAGTCTTGCATAAAGTTATACATATTTTTCTGTTTT  300

seq1  GGGTAATATAAGGGAATACGTTCGTTCACACTTTAAGAGTTCAACACAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAATATAAGGGAATACGTTCGTTCACACTTTAAGAGTTCAACACAAG  350

seq1  TTTCTTATAACAAACAATATGACTACAGTAAAAAGAATTGAATATTTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTATAACAAACAATATGACTACAGTAAAAAGAATTGAATATTTAAT  400

seq1  ACACAACCCTAAATGGGAAACAATATTTTAAAAATTCATTTCTTTTATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACCCTAAATGGGAAACAATATTTTAAAAATTCATTTCTTTTATAT  450

seq1  AGGTAAATTAACATCAACTATGTGAAATATTGAATTGACATTGATCTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAATTAACATCAACTATGTGAAATATTGAATTGACATTGATCTATA  500

seq1  GCTAATTGTCCTTAAAAATAAATGGGGTAATTTAGTTTCATTTTGTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTGTCCTTAAAAATAAATGGGGTAATTTAGTTTCATTTTGTTTTT  550

seq1  GAAACATCAGTACACCACCTGTAGCAACTGCTAAATACTGAGGACATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATCAGTACACCACCTGTAGCAACTGCTAAATACTGAGGACATATA  600

seq1  TATGAAAAGAATGATAGGTTTTATATATGAGAGAGTGTTTGTTTTGAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAAGAATGATAGGTTTTATATATGAGAGAGTGTTTGTTTTGAAAC  650

seq1  TCAACATATTTTCTGATTTTGTCAAGAAAAAAGTAGTTTATTTTATATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATATTTTCTGATTTTGTCAAGAAAAAAGTAGTTTATTTTATATAT  700

seq1  AAGCTGCTGGTTCCAGTTTTTAAAATAAGTCAGGTATAAATAACTCATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCTGGTTCCAGTTTTTAAAATAAGTCAGGTATAAATAACTCATAT  750

seq1  AAGAATCATCTCAGCTGATCTCTTCATTCAAATAATAATTGTTGTTTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCATCTCAGCTGATCTCTTCATTCAAATAATAATTGTTGTTTTCC  800

seq1  CAGGATGTCAACAATTCTGTATTAAATGTTAAAATTGTTCTGCTAATAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGTCAACAATTCTGTATTAAATGTTAAAATTGTTCTGCTAATAAG  850

seq1  ATAAAACCAGCAATTGCTTTTTTGGTATATGTTCCTCTTCAGAACCATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACCAGCAATTGCTTTTTTGGTATATGTTCCTCTTCAGAACCATTT  900

seq1  ACATTTTCCAAAAATGAAATACAGGATAGCGAAGCACATTCAAATTGG-T  949
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACATTTTCCAAAAATGAAATACAGGATAGCGAAGCACATTCAAATTGGTT  950

seq1  GGAATTAAGAATGGTCATATTCCTTCAGAAGAAAAGAATAAAAACTAATC  999
      ||||||||||||||||||||||||||||||| |||||||||||||| |||
seq2  GGAATTAAGAATGGTCATATTCCTTCAGAAG-AAAGAATAAAAACT-ATC  998

seq1  TTGATCCTCATCAGAAATAACTTTAAAAATAGCAAGTCTATCCAGTTTTA  1049
       ||||||||||||||||| ||||| |||||||||||||||| ||| ||||
seq2  -TGATCCTCATCAGAAAT-ACTTT-AAAATAGCAAGTCTAT-CAG-TTTA  1043

seq1  TTGATACCAGCAGGGGCAGTGCAGTGGTATCAACCTGG-ACAATA-TATC  1097
      |||||| |||||||||||||||||||  ||||  |||| |||||| ||||
seq2  TTGATA-CAGCAGGGGCAGTGCAGTG--ATCA--CTGGAACAATATTATC  1088

seq1  ATGCTCACAACAAGATCCATCTAAAAATACTTT  1130
      |||||||| ||| |||| |||||||||||||||
seq2  ATGCTCACGACAGGATCAATCTAAAAATACTTT  1121


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