BAC Information

Click to search

BAC

Clone NameB6Ng01-270B09
Chromosome15 (Build37)
Map Location 72,552,096 - 72,553,153
singlet/doubletsinglet
Overlap gene1810044A24Rik
Upstream geneLOC100040847, Col22a1, Kcnk9
Downstream geneLOC665621, Peg13, LOC100041120, Chrac1, Eif2c2, Ptk2, LOC666053, LOC100040929, Dennd3, Slc45a4, Gpr20, LOC100040946
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270B09.bB6Ng01-270B09.g
ACCGA072519GA072520
length1,1381,175
definitionB6Ng01-270B09.b B6Ng01-270B09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagatatcctggcctttgtaagtacagacagtaagctagctgg
gtaaaatcctgtcctgagattactattcctaccatgtctggacctaaatt
cacatgtcccaggctgatcttaaactcaggaatctgcctgtatttgtatc
tttccgacaacctggctgcctttgttctgttagatccatgaagctcttca
caccattcatattgcatccttatattttgcatagttaagaaactatacat
tcttgaactcatgttttcagagttctttcccacagccttaaggactgttc
taaaggtcacagcatttacattttgctaaggacattagacataccctcac
ctcctgaactcctgctgtctctgattattatggagttattaactttggca
gagaagagagttccctaaagaagaacataaaataaacaagcaagtcttat
gcctagcaactgttaacacttgtggaggcccaagccctgctagctctgtt
ccaggagcaggaaccatgtcatactgcctcttgtgcgtggacatgcagac
ttgactatttgtgactcccaaaggggtctttacccacaggtttggaactg
ctgctctatgagaacatgtgtgacaccttctgctgggaataggggaatgc
acggcataggtaaagtagcaacagaacagaaggtccattacaatgcccag
aagccaggagaatacatagcctaacattataaattctgtaaaagcacaat
tttcttaatagctatctaacagtcaactaatagatgtcagacattttagt
tgttttcatattataagtaacatataagcatcctgatgtccaggacttga
tcagaggtttcaaatacttttatgagaattgattaacaggagggaattgt
tctctagctccaagccttcaaggctatgtgttagatgtggatgggtggcc
ttgtggtaaggcagaaggtatgtttatccacatggaaactgagcatccat
gtagagcattgaaaggtaggggacaggagccctgagagaaagcgttgtct
catctcagcaagaatcacttgtatcttccaaatacctgatgtcatggagc
ccatctacccagagggaaaaagagtaatcgagtgagct
gaattctcttgtgtttagaaagtgttgatggacaatggaaagccttgcta
catacttcacacttacggggtttctctcctgtatttattttcttatggtt
ggaaagtgttgatggacaatggaaggccttgccacatacttcacacttgt
agagcttttctcctgtacggattatcttgtgtttagaaagtaatgatgga
aaatggaaggacttgccacatcttcacacctgtagggctttctttttaaa
tgaattctctggtgattttgaaatatttttttcttctcaaagtctttgcc
acattgtttgcatatagcaattttcccctccatgtcagagatccaagctc
agtgttgagcaggacaattgcctagcatgggtagaaatgaagtttgaaga
tggaatgcagaattttgttacccatagccagttctggtgatgtcataatc
cagtttctggctactataagtaatgctgctatgaacatagtggagcatgt
gtctgtgttatatgttagaacatttttgggggtatatacccagtagtggt
atagctgggtcttcaggtagaactatttccaattttctcaggaactgcca
gactgatttccaaagtggtcttactagcttgcagtcccaccagcaatgga
ggactgttcctctttctccatatccttgccaacatcttctgtcacctgcc
tttttgatcttagccattctgattggtgtgaggtggaatctcacggtcat
tttgatttgtatttccctgatgactaaggatgttgaacatttctttaagt
gcttctcagccatttgagattccttggttgagaattctctatttagctct
gtactccacttttttaatagggttatttgcttctctggagtctcccttct
tgggttctttgtatattttgggatattagtcctctattggatgtaggatt
gggtaattatcttttcccaatctgtgggttgccattttgttctatgacag
tgtcctttgcgtacagagctttttagtttatgagtcccattgtcattata
atctagacacagcatggtgttctgttcaggaattttcctgtgacatatgt
ttccatgcctttacactctcactcaattgattcagggtacctgctttata
gtgttaaggggtccctgtgtgaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_72552096_72553153
seq2: B6Ng01-270B09.b_150_1184

seq1  ATGTCCCAGGCTGATCTTAAACTCAGGAATCTGCCTGTATTTGTATCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCAGGCTGATCTTAAACTCAGGAATCTGCCTGTATTTGTATCTTT  50

seq1  CCGACAACCTGGCTGCCTTTGTTCTGTTAGATCCATGAAGCTCTTCACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACAACCTGGCTGCCTTTGTTCTGTTAGATCCATGAAGCTCTTCACAC  100

seq1  CATTCATATTGCATCCTTATATTTTGCATAGTTAAGAAACTATACATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATATTGCATCCTTATATTTTGCATAGTTAAGAAACTATACATTCT  150

seq1  TGAACTCATGTTTTCAGAGTTCTTTCCCACAGCCTTAAGGACTGTTCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCATGTTTTCAGAGTTCTTTCCCACAGCCTTAAGGACTGTTCTAA  200

seq1  AGGTCACAGCATTTACATTTTGCTAAGGACATTAGACATACCCTCACCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACAGCATTTACATTTTGCTAAGGACATTAGACATACCCTCACCTC  250

seq1  CTGAACTCCTGCTGTCTCTGATTATTATGGAGTTATTAACTTTGGCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTCCTGCTGTCTCTGATTATTATGGAGTTATTAACTTTGGCAGAG  300

seq1  AAGAGAGTTCCCTAAAGAAGAACATAAAATAAACAAGCAAGTCTTATGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGTTCCCTAAAGAAGAACATAAAATAAACAAGCAAGTCTTATGCC  350

seq1  TAGCAACTGTTAACACTTGTGGAGGCCCAAGCCCTGCTAGCTCTGTTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACTGTTAACACTTGTGGAGGCCCAAGCCCTGCTAGCTCTGTTCCA  400

seq1  GGAGCAGGAACCATGTCATACTGCCTCTTGTGCGTGGACATGCAGACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGGAACCATGTCATACTGCCTCTTGTGCGTGGACATGCAGACTTG  450

seq1  ACTATTTGTGACTCCCAAAGGGGTCTTTACCCACAGGTTTGGAACTGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTGTGACTCCCAAAGGGGTCTTTACCCACAGGTTTGGAACTGCTG  500

seq1  CTCTATGAGAACATGTGTGACACCTTCTGCTGGGAATAGGGGAATGCACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGAGAACATGTGTGACACCTTCTGCTGGGAATAGGGGAATGCACG  550

seq1  GCATAGGTAAAGTAGCAACAGAACAGAAGGTCCATTACAATGCCCAGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGGTAAAGTAGCAACAGAACAGAAGGTCCATTACAATGCCCAGAAG  600

seq1  CCAGGAGAATACATAGCCTAACATTATAAATTCTGTAAAAGCACAATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGAATACATAGCCTAACATTATAAATTCTGTAAAAGCACAATTTT  650

seq1  CTTAATAGCTATCTAACAGTCAACTAATAGATGTCAGACATTTTAGTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATAGCTATCTAACAGTCAACTAATAGATGTCAGACATTTTAGTTGT  700

seq1  TTTCATATTATAAGTAACATATAAGCATCCTGATGTCCAGGACTTGATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATATTATAAGTAACATATAAGCATCCTGATGTCCAGGACTTGATCA  750

seq1  GAGGTTTCAAATACTTTTATGAGAATTGATTAACAGGAGGGAATTGTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTTCAAATACTTTTATGAGAATTGATTAACAGGAGGGAATTGTTCT  800

seq1  CTAGCTCCAAGCCTTCAAGGCTATGTGTTAGATGTGGATGGGTGGCCTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCCAAGCCTTCAAGGCTATGTGTTAGATGTGGATGGGTGGCCTTG  850

seq1  TGGTAAGGCAAGAAGGTATGTTTATCCACATGGAAAACTGAGCATCCATG  900
      ||||||||| ||||||||||||||||||||||| ||||||||||||||||
seq2  TGGTAAGGC-AGAAGGTATGTTTATCCACATGG-AAACTGAGCATCCATG  898

seq1  TAGAGCATTGAAAGGTAAGGGGACAAGGAGGCCCTGGAGAGAAAGCGTTG  950
      |||||||||||||||| ||||||| |||| ||||| ||||||||||||||
seq2  TAGAGCATTGAAAGGT-AGGGGAC-AGGA-GCCCT-GAGAGAAAGCGTTG  944

seq1  TCTCATCCTCAGGCAAAGAAACCACTGTATCCTCCCCAAAATACCCTGGA  1000
      |||||| |||||   ||||| |   |||||| |||   |||||||   ||
seq2  TCTCAT-CTCAG--CAAGAATCACTTGTATCTTCC---AAATACC--TGA  986

seq1  TGGCCATGAGCCACATCTACCCAGAGGGGAAAAAAAAGAGTGGAAATAGG  1050
      || |   ||||| |||||||||||||||    |||||||||   |||  |
seq2  TGTCATGGAGCC-CATCTACCCAGAGGG----AAAAAGAGT---AAT-CG  1027

seq1  AGTGAGCT  1058
      ||||||||
seq2  AGTGAGCT  1035