BAC Information

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BAC

Clone NameB6Ng01-270C01
Chromosome15 (Build37)
Map Location 60,220,162 - 60,221,129
singlet/doubletsinglet
Overlap genenone
Upstream geneNsmce2, Trib1, LOC665602, EG632248, LOC665613, 4933412E24Rik, LOC100040266, LOC623048
Downstream geneLOC211832, LOC623094, EG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg, LOC100040323
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270C01.b
ACCGA072551
length979
definitionB6Ng01-270C01.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccgattgcttcttctgctactgatgacatcttctcaggctcaagg
tatgccaaacggattcatctcaaacttcttgtatgcgaatgactgtgagt
tagagttccgccttggggttcttaatgtctcatgggaagttcttattctt
gcttgtcaagtctcttctttcttttaacttgattttgaactttgaacttg
tcatggtcagagatggcttgggaaacaaacacgatctttcctgaagagat
ccttctgctctccttgaatatgcagtccttatctttccaggacacatgca
ttagtgccattaattttttcattttgttaggaaatcggcattttgcatct
gatactgcctttcccattgtttttacatgtaagatttgggaatttgcatt
gttcatatggttaggcaggaatgaaggaatggcagatacaaatttaaaga
cgaaagagagactgtagttgactcatacttctgcagaggaactaaaagga
tctgaaactcaataaggattggaaacaaaatgataatctttctctataat
gacctaggaagtgggcatattgcacacttataactgcagggctcagacaa
gatgaacgaagtataactttgaggctaggttgtgctacaaagctacatca
tgaaaactgtaagaatgaaagaaggaacaaagaaaagaatgaaaaatgga
gactggcgtggtgtcctgtgcacagactctcatgtacattgatatatcaa
attgttgttctattgtacagactgagtggcttccctgaccatctctgatg
tatagtgttctcatttggttataaaagataaaagaaccattctggacgcc
gcccttttctctgttgcttccttctctgggcgagctgaagtttgatgtca
caccatacccctgcactgttttgacggcttgcgccttttaacgtcttgca
cacagtatactgcctgaactaatgacata
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_60220162_60221129
seq2: B6Ng01-270C01.b_59_1021

seq1  TTCTGCTACTGATAACATCATCTCCAGGCTCAAGGTATGCCAAAGGGATT  50
      ||||||||||||| ||||| ||| |||||||||||||||||||| |||||
seq2  TTCTGCTACTGATGACATCTTCT-CAGGCTCAAGGTATGCCAAACGGATT  49

seq1  CATCTCAAACTTCTTGTATGCCAATGACTGTGAGTTAGAGTTCCGCCTTG  100
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CATCTCAAACTTCTTGTATGCGAATGACTGTGAGTTAGAGTTCCGCCTTG  99

seq1  GGGTTCTTAATGTCTCATGGGAAGTTCTTATTCTTGCTTGTCTAGTCTCT  150
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGGTTCTTAATGTCTCATGGGAAGTTCTTATTCTTGCTTGTCAAGTCTCT  149

seq1  TCTTTCTTTTAACTTGATTTTGAACTTTGAACTTGTCATGGTCAGAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTTAACTTGATTTTGAACTTTGAACTTGTCATGGTCAGAGATG  199

seq1  GCTTGGGAAACAAACAAGATCTTTCCTGAAGAGATCCTTCTGCTCTCATT  250
      |||||||||||||||| |||||||||||||||||||||||||||||| ||
seq2  GCTTGGGAAACAAACACGATCTTTCCTGAAGAGATCCTTCTGCTCTCCTT  249

seq1  GAATATGCAGTCCTTATCTTTCCAGGAGACATGCATTAGTGCCATTAAGT  300
      ||||||||||||||||||||||||||| |||||||||||||||||||| |
seq2  GAATATGCAGTCCTTATCTTTCCAGGACACATGCATTAGTGCCATTAATT  299

seq1  TTTTCATTTTGTTATGAAATCAGCATTTTGCAGCTGATACTGCCTTTCCC  350
      |||||||||||||| |||||| |||||||||| |||||||||||||||||
seq2  TTTTCATTTTGTTAGGAAATCGGCATTTTGCATCTGATACTGCCTTTCCC  349

seq1  ATTGTTTTTACATGTAAGATTTGGGAATTTGCATTGTTCATATGGTTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTTACATGTAAGATTTGGGAATTTGCATTGTTCATATGGTTAGG  399

seq1  CAGGAATGAAGGAATGGCAGATACAAATTTAAAGAGGAAAGAGAGACTGT  450
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAGGAATGAAGGAATGGCAGATACAAATTTAAAGACGAAAGAGAGACTGT  449

seq1  AGTTGACTCATACTTCTGCAGAGGAACTAAAAGGATCTGAAACTCAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGACTCATACTTCTGCAGAGGAACTAAAAGGATCTGAAACTCAATAA  499

seq1  GGATTGGAAACAAAATGATAATCTTTCTCTAGAATGACCTAGGAAGTGGG  550
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GGATTGGAAACAAAATGATAATCTTTCTCTATAATGACCTAGGAAGTGGG  549

seq1  CATATTGCACACTTATAACTGCAGGGCTCAGTACAAGATGAAGGAAGTAT  600
      ||||||||||||||||||||||||||||||| |||||||||| |||||||
seq2  CATATTGCACACTTATAACTGCAGGGCTCAG-ACAAGATGAACGAAGTAT  598

seq1  AAGTTTGAGGCTAGGTTGTGCTACAAAGCTACAGCATGAAAAGTGTAAGA  650
      || |||||||||||||||||||||||||||||| |||||||| |||||||
seq2  AACTTTGAGGCTAGGTTGTGCTACAAAGCTACATCATGAAAACTGTAAGA  648

seq1  AGGAAGGAAGGAAGAAAGAAAAGAATGAAAAATGGAGACTGGCGTGGTGT  700
      | ||| ||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGAAGGAACAAAGAAAAGAATGAAAAATGGAGACTGGCGTGGTGT  698

seq1  CCTGGGCACAGACTCTCATGTACATTGATTTATCAAATTGTTGTTAGTAT  750
      |||| |||||||||||||||||||||||| |||||||||||||||  |||
seq2  CCTGTGCACAGACTCTCATGTACATTGATATATCAAATTGTTGTT-CTAT  747

seq1  TGTACAGACTGAGTGGCTTCCCTGACCATCTTTGATGTTTAGTGTTCTCA  800
      ||||||||||||||||||||||||||||||| |||||| |||||||||||
seq2  TGTACAGACTGAGTGGCTTCCCTGACCATCTCTGATGTATAGTGTTCTCA  797

seq1  TTTGGTTATAAAAGAAAAAAGAACCATTCTGGAGGCCGCCCTTTTCTCTG  850
      ||||||||||||||| ||||||||||||||||| ||||||||||||||||
seq2  TTTGGTTATAAAAGATAAAAGAACCATTCTGGACGCCGCCCTTTTCTCTG  847

seq1  TTGCTTCCTTCTCTGGGCGGAGCTAAGGTTTGATGTAACACCATTCCCCT  900
      |||||||||||||||||| ||||| | ||||||||| ||||||| |||||
seq2  TTGCTTCCTTCTCTGGGC-GAGCTGAAGTTTGATGTCACACCATACCCCT  896

seq1  GCCCTTGTTTTGATGGCCTGGGCTTTTTAAAGTTTTGCACGGAGTATACT  950
      || | |||||||| ||| || || |||||| || ||||||  ||||||||
seq2  GCAC-TGTTTTGACGGCTTGCGCCTTTTAACGTCTTGCACACAGTATACT  945

seq1  GCCTGTGCTAATGCCATA  968
      |||||  |||||| ||||
seq2  GCCTGAACTAATGACATA  963