BAC Information

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BAC

Clone NameB6Ng01-271B22
Chromosome15 (Build37)
Map Location 101,637,571 - 101,638,537
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc4a8, Scn8a, EG668225, Ankrd33, Acvrl1, Acvr1b, Grasp, Nr4a1, 9430023L20Rik, 6030408B16Rik, Krt80, Krt7, Krt85, Krt83, 1700011A15Rik, 5430421N21Rik, EG574415, Krt84, Krt82, 4732456N10Rik, Krt75, EG432985, EG432986, EG406223, EG432987, Krt6b, Krt6a, Krt5, Krt71, Krt74, Krt72, Krt73
Downstream geneKrt2, LOC100043001, Krt1, Krt77, Krt76, Krt4, Krt79, Krt78, Krt8, Krt18, LOC676882, Eif4b, Tenc1, Spryd3, Igfbp6, Soat2, Csad, Zfp740, Itgb7, Rarg, D15Mgi27, Espl1, Pfdn5, Myg1, Aaas, Sp7, Sp1, Amhr2, Prr13, Pcbp2, Map3k12, Tarbp2, Npff, Atf7, LOC100043600, Atp5g2, Calcoco1, LOC637762, LOC100043050
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271B22.bB6Ng01-271B22.g
ACCGA073287GA073288
length304967
definitionB6Ng01-271B22.b B6Ng01-271B22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
attgaaggagctagagaaagtacccaaggatctgaaggtgtttgcatccc
cataggaggaaaaacaatatgaactaaccagtacccccagagttccctgg
cactaaaccatcagtcaaagaaaacaaatggtgggactcatggctctagc
tgcatctatagcagaggatagcctagtcagtcatcaatgagaggacaggc
ccttggtcctgtgaaagttctgtgccacagtataggggaatggcaggacc
aggaattgggagtggatgggtcgatgaacgggggaggggcaggggatagg
ggat
gaattctttgttcagttctgagccccattttttaatggggttatatgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttagtaaaacacacactcttacttgtagctcccagaggagttgggaggat
cctggaaatgcacaggattaacaaactctaggtgcgccagaggctgtggc
gtgagaactgcgttctgtgggctcagtggtgggctcattttctggctctt
tgaaattcagtaggcacttagtaaaattagtcaggattggatgaaggaat
gtgagacctctggcacattttaacaatttagcaattcagagcctgggttt
acacatttataaaacaatacagggctgttagaaagataaacacagcgaca
gtgagaactgtctgctcactccttagggcctgtgtcttagcccctgcagt
aggtgctaagcagtgctcctcaccgttcttgtcagacagtattgtgggga
ctggggaggcttcacagctgagctgggattgcacacaggcacatgtagga
ttaagacaaaatgacactaattccacacaaactcttccagaagacagaaa
aatcagtactttccaacttgtttgaaggaaccacaccaagacattgtaaa
aacaaacaaccaaaaaacaaccaaccaaccaaccaaaacaacaacaaaac
aaacaaacaaacaaaaaaaccccaaaaacctagacctaaacctaaacatg
ctcacatccctcaaaaccatagactccaaagttctcaagaagatatgagc
aaattcgactcaaggatttgtaaaaagggtatgacatcatgctgtgtgaa
ggggagggagaggggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_101637571_101638537
seq2: B6Ng01-271B22.g_66_1032 (reverse)

seq1  TCCCCCTCTCCCTCCCCTTCACACAGCATGATGTCATACCCTTTTTACAA  50
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCTCTCCCTCCCCTTCACACAGCATGATGTCATACCCTTTTTACAA  50

seq1  ATCCCTGAGTCGAATTTGCTCATATCTTCTTGAGAACTTTGGAGTCTATG  100
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGAGTCGAATTTGCTCATATCTTCTTGAGAACTTTGGAGTCTATG  100

seq1  GTTTTGAGGGATGTGAGCATGTTTAGGTTTAGGTCTAGGTTTTTGGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAGGGATGTGAGCATGTTTAGGTTTAGGTCTAGGTTTTTGGGGTT  150

seq1  TTTTTGTTTGTTTGTTTGTTTTGTTGTTGTTTTGGTTGGTTGGTTGGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTGTTTGTTTGTTTTGTTGTTGTTTTGGTTGGTTGGTTGGTTG  200

seq1  TTTTTTGGTTGTTTGTTTTTACAATGTCTTGGTGTGGTTCCTTCAAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGTTGTTTGTTTTTACAATGTCTTGGTGTGGTTCCTTCAAACAA  250

seq1  GTTGGAAAGTACTGATTTTTCTGTCTTCTGGAAGAGTTTGTGTGGAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAAAGTACTGATTTTTCTGTCTTCTGGAAGAGTTTGTGTGGAATTA  300

seq1  GTGTCATTTTGTCTTAATCCTACATGTGCCTGTGTGCAATCCCAGCTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCATTTTGTCTTAATCCTACATGTGCCTGTGTGCAATCCCAGCTCAG  350

seq1  CTGTGAAGCCTCCCCAGTCCCCACAATACTGTCTGACAAGAACGGTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAGCCTCCCCAGTCCCCACAATACTGTCTGACAAGAACGGTGAGG  400

seq1  AGCACTGCTTAGCACCTACTGCAGGGGCTAAGACACAGGCCCTAAGGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGCTTAGCACCTACTGCAGGGGCTAAGACACAGGCCCTAAGGAGT  450

seq1  GAGCAGACAGTTCTCACTGTCGCTGTGTTTATCTTTCTAACAGCCCTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGACAGTTCTCACTGTCGCTGTGTTTATCTTTCTAACAGCCCTGTA  500

seq1  TTGTTTTATAAATGTGTAAACCCAGGCTCTGAATTGCTAAATTGTTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTATAAATGTGTAAACCCAGGCTCTGAATTGCTAAATTGTTAAAA  550

seq1  TGTGCCAGAGGTCTCACATTCCTTCATCCAATCCTGACTAATTTTACTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCAGAGGTCTCACATTCCTTCATCCAATCCTGACTAATTTTACTAA  600

seq1  GTGCCTACTGAATTTCAAAGAGCCAGAAAATGAGCCCACCACTGAGCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTACTGAATTTCAAAGAGCCAGAAAATGAGCCCACCACTGAGCCCA  650

seq1  CAGAACGCAGTTCTCACGCCACAGCCTCTGGCGCACCTAGAGTTTGTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACGCAGTTCTCACGCCACAGCCTCTGGCGCACCTAGAGTTTGTTAA  700

seq1  TCCTGTGCATTTCCAGGATCCTCCCAACTCCTCTGGGAGCTACAAGTAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGCATTTCCAGGATCCTCCCAACTCCTCTGGGAGCTACAAGTAAG  750

seq1  AGTGTGTGTTTTACTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTGTTTTACTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACA  800

seq1  CCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACC  850

seq1  TATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAA  900

seq1  GAAGGTGGACTTCAGAAAATCATATAACCCCATTAAAAAATGGGGCTCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGGACTTCAGAAAATCATATAACCCCATTAAAAAATGGGGCTCAG  950

seq1  AACTGAACAAAGAATTC  967
      |||||||||||||||||
seq2  AACTGAACAAAGAATTC  967