BAC Information

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BAC

Clone NameB6Ng01-272K07
Chromosome15 (Build37)
Map Location 27,471,221 - 27,472,384
singlet/doubletsinglet
Overlap geneAnk
Upstream geneFbxl7, LOC622531, LOC625311
Downstream geneBC087945, LOC100040622, BC052328, Trio, LOC667126, Dnahc5, EG382974, LOC100040675
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272K07.bB6Ng01-272K07.g
ACCGA074418GA074419
length1,0041,147
definitionB6Ng01-272K07.b B6Ng01-272K07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcatctgattcagagctaccaagagctggctccccgagcccat
ccagcgatgagcacaggctccttttcctagagacctccgctaattgatct
ttcttcttttccctttttcctctttttcttctaatctctctccaggtatt
cctacctaaccttaacttttcctcgggttcaagacccttggaaaggcctg
tatacttattttgtgtaccatatttcctctttgttcctactctctctccc
cactttacttctgatagcttgtcctgaatttcatctagaatccgccctgc
cttaaccacttgataacatgtgaaaaggaacaaaagggctcctaacacca
gaaaaaattcaaggccaaatataccttgtaaagccatttcccactttact
tctgatagactgtcttgaatttcgttagaaagttcaagaccaggcttacc
tcgtaaagctatactcactggtactctcgttccccagctgaaaagttctg
aattcatgcagttgaatccttcttaacagtctgctttacgggaaccttta
ttaccgcgacccgcagttctggttctggaatgagggatcttccttgcgcc
agtcccgagttttttctcgtcccggaattcggcaccaattgttattagac
gcgttctcacgcccggccaggaagaacacagcaaaccaaaatcttctgcg
gcaaaactttattgcttacatcttcaggagcaagagtgtaagaagcaaaa
gagagagaaaacgaaaccccgtccctattaaggagaattatccttcgcct
aggacgtgtcactccctgattggctgcagcccatcggccgagttgacgtc
acggggaaggcagagcacatggagtggagaaccaccctcggcacatgcgc
agattatttgtttaccacttagaacacagctgtcagtgccatcttgtaac
ggcgaatgtgggcgcggctcccaacacctatattcaaaattacgtgtgtg
tgtg

gaattcatttcttcttccttgtacttgaactttcccgaaagaactgtttg
gaaaacagtgataactttttttttcttttttttttttttttttttttaga
aacaaacttttccttccgtcaaaatgaatcaaatcaaaaaccttacttaa
ggccatagggaaaactaaaaaccaagcgactgacgccctggggatggatc
ttgggtttgatacgagggctcccactatgcttttgagcttagcaacttga
tcacctatgcagttagtccagtgggaatccgaggtggataccggcgctgt
ccaccagtctcacagatccccaggtggcaggaacgcaagaactgataggc
tctcgttatgaggactagctccttgcctctgtggccacttctggtacaat
tccccacaggatttagaagtagactccagcagacaccagtctttgcttcc
cctgcctcacccccatcctgcttgctccacccctcttcagaaagcgtatg
ctcacgaattcacagtgttcacttcaggtcttgtgaacagttttgaatag
cttcttagcctcccagagctgtataatccacagtaccaatgtcacaccat
ggaatgcctgctcaggtctcataactggtatagttgaaaccctcccccca
tctttcctctaatctatggttttggatttttaaataaacatgtatttatt
tagtatgtgtgtatacatgtgtgtacacacatgacaggtcatggatctgg
aggtaagagggcaacctgcagaagtgaggtctcttctaccatgtaggttc
ccgggactgaaccaaacttgccaggcttggtggcaaacaccttgtcccgc
tgggttgtctcaccagcccgtggactgttttgtctctagagcataaaagc
atgttaaaatttaatgacattatctagcacaagcttcaaacacacttagt
agcatacctatgtaatgtagaacagactattcttacatgttttcctcaac
aaacattagatttttttttgttcacaaagacatcaccaacacatcacagc
agcccatcagccgtgctgcactctaatttccacaacattctgagcctgat
tctaccttggacctgagcagtgaaggccaagcctaatgatggctgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_27471221_27472384
seq2: B6Ng01-272K07.g_66_1212 (reverse)

seq1  GACAGCCATCATTAGCTCTGCCCTTCCAACCTGCTTCAGCTCCAGGTTTA  50
      |||||||||||||||   || |||||    |||| |||| |||| | |  
seq2  GACAGCCATCATTAGGCTTGGCCTTC---ACTGC-TCAGGTCCAAGGT--  44

seq1  AGACTCA-GCTCAGGAAATGTTGGTGGAAATAGAAGTGCAGCCACGGCTG  99
      ||| ||| ||||||  |||||| ||||||||   ||||||| ||||||||
seq2  AGAATCAGGCTCAG--AATGTT-GTGGAAATTAGAGTGCAG-CACGGCTG  90

seq1  ATGGGCTGCTGTGATTGTTTGTTGGTTTGTTTGTTTTTTTTTTTTAACAA  149
      |||||||||||||||   ||| || | | ||||          | |||||
seq2  ATGGGCTGCTGTGATGTGTTGGTGATGTCTTTG----------TGAACAA  130

seq1  AAAAAAATCTAATGTTTGTTGA-GAAAACATGTA--GATAGTCTGTTCCT  196
      |||||||||||||||||||||| |||||||||||   |||||||||| ||
seq2  AAAAAAATCTAATGTTTGTTGAGGAAAACATGTAAGAATAGTCTGTT-CT  179

seq1  ACATTACATAGGTATGCTACTAAGTGTGTTTGAAGCTTGTGCTAGATAAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTACATAGGTATGCTACTAAGTGTGTTTGAAGCTTGTGCTAGATAAT  229

seq1  GTCATTTAAATTTTAACATGCTTTTATGCTCTAGAGAC-AAACAGTCCAC  295
      |||| ||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTCA-TTAAATTTTAACATGCTTTTATGCTCTAGAGACAAAACAGTCCAC  278

seq1  GGGCTGGTGAGACAACCCAGCCGGACAAGGTGTTTGCCACCAAGCCTGGC  345
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGGCTGGTGAGACAACCCAGCGGGACAAGGTGTTTGCCACCAAGCCTGGC  328

seq1  AAGTTTGGTTCAGTCCCGGGAACCTACATGGTAGAAGAGACCTCACTTCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGGTTCAGTCCCGGGAACCTACATGGTAGAAGAGACCTCACTTCT  378

seq1  GCAGGTTGCCCTCTTACCTCCAGATCCATGACCTGTCATGTGTGTACACA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTTGCCCTCTTACCTCCAGATCCATGACCTGTCATGTGTGTACACA  428

seq1  CATGTATACACACATACTAAATAAATACATGTTTATTTAAAAATCCAAAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATACACACATACTAAATAAATACATGTTTATTTAAAAATCCAAAA  478

seq1  CCATAGATTAGAGGAAAGATGGGGGGAGGGTTTCAACTATACCAGTTATG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGATTAGAGGAAAGATGGGGGGAGGGTTTCAACTATACCAGTTATG  528

seq1  AGACCTGAGCAGGCATTCCATGGTGTGACATTGGTACTGTGGATTATACA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGAGCAGGCATTCCATGGTGTGACATTGGTACTGTGGATTATACA  578

seq1  GCTCTGGGAGGCTAAGAAGCTATTCAAAACTGTTCACAAGACCTGAAGTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGGAGGCTAAGAAGCTATTCAAAACTGTTCACAAGACCTGAAGTG  628

seq1  AACACTGTGAATTCGTGAGCATACGCTTTCTGAAGAGGGGTGGAGCAAGC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGTGAATTCGTGAGCATACGCTTTCTGAAGAGGGGTGGAGCAAGC  678

seq1  AGGATGGGGGTGAGGCAGGGGAAGCAAAGACTGGTGTCTGCTGGAGTCTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGGGGGTGAGGCAGGGGAAGCAAAGACTGGTGTCTGCTGGAGTCTA  728

seq1  CTTCTAAATCCTGTGGGGAATTGTACCAGAAGTGGCCACAGAGGCAAGGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAAATCCTGTGGGGAATTGTACCAGAAGTGGCCACAGAGGCAAGGA  778

seq1  GCTAGTCCTCATAACGAGAGCCTATCAGTTCTTGCGTTCCTGCCACCTGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTCCTCATAACGAGAGCCTATCAGTTCTTGCGTTCCTGCCACCTGG  828

seq1  GGATCTGTGAGACTGGTGGACAGCGCCGGTATCCACCTCGGATTCCCACT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTGTGAGACTGGTGGACAGCGCCGGTATCCACCTCGGATTCCCACT  878

seq1  GGACTAACTGCATAGGTGATCAAGTTGCTAAGCTCAAAAGCATAGTGGGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAACTGCATAGGTGATCAAGTTGCTAAGCTCAAAAGCATAGTGGGA  928

seq1  GCCCTCGTATCAAACCCAAGATCCATCCCCAGGGCGTCAGTCGCTTGGTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCGTATCAAACCCAAGATCCATCCCCAGGGCGTCAGTCGCTTGGTT  978

seq1  TTTAGTTTTCCCTATGGCCTTAAGTAAGGTTTTTGATTTGATTCATTTTG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTTCCCTATGGCCTTAAGTAAGGTTTTTGATTTGATTCATTTTG  1028

seq1  ACGGAAGGAAAAGTTTGTTTCTAAAAAAAAAAAAAAAAAAAAAAGAAAAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAAGGAAAAGTTTGTTTCTAAAAAAAAAAAAAAAAAAAAAAGAAAAA  1078

seq1  AAAAGTTATCACTGTTTTCCAAACAGTTCTTTCGGGAAAGTTCAAGTACA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTATCACTGTTTTCCAAACAGTTCTTTCGGGAAAGTTCAAGTACA  1128

seq1  AGGAAGAAGAAATGAATTC  1164
      |||||||||||||||||||
seq2  AGGAAGAAGAAATGAATTC  1147


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