BAC Information

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BAC

Clone NameB6Ng01-272P11
Chromosome15 (Build37)
Map Location 28,890,537 - 28,891,582
singlet/doubletsinglet
Overlap genenone
Upstream geneTrio, LOC667126, Dnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272P11.bB6Ng01-272P11.g
ACCGA074657GA074658
length1,046325
definitionB6Ng01-272P11.b B6Ng01-272P11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtaatcatgggtgtcacactgattcattaaggaaactaaaac
cccccaaattgtatagtatcccccaacgacaaacacgagccatattatca
ggaaaatggatagagatgactatgatcttttaagtaaattaaacctagtt
cagaagtataagtattatcaggtttatttccttataaaatttaatattta
agaagcaaatactagtaaataatgtatgaagaagaggatggggaagaaag
gatcagtgagagaagttgataaatggcatgggaattatcatgatttatta
cactgtttttaattttatacgtgtgtgttggaatatatatgaaacactgt
tgtctgtggaatccagaagagagcagagtatctgctcaaacaggagttac
tgcttatgaactatccaacttaggtgctgggaattgaacatgagtcgttt
ggataagcagtaggtgttcttcaatgttaagctaaaataaattagttttt
ttgttttaaattgcaacattccatatttatgcctgttttaaaatttatta
taccccttacagttggtgcctgctccaggccatcttgggcaggaacttgg
cagacggtcccaccatccccagaggactctccacactgcagacaccctag
caagcccaggatcttaggatcactggtgagtggaacacaacatctgttcc
aaaccaaccatgagagacctgtgccagcagaagcaaggacataggagccc
tgcctgaccacaggctcaggttccttctggtcagtgctgttataccttag
ttttgaatacagcggacagccccatgatccccagaggagacaccaattcc
aggcactatgagacgcacaagatcttaggattccaggattccagaagccc
aggagcttggtcacaccaggatctcagggtctcagaggaagcttgactgc
ccagaactcagaatctcatgttcacaggatcctggaatcacccggatcac
aagaaatctggacactggagagtcccgaatcaactgggattacagg

ccctatctcatccccctccccctgtttctatgagggtgctcccccatcca
cccacccactcctgcctccccactctggcattcccttacccagggcattg
aaccctcactggaccaagggcttctcctctcattgatgcctgacaagact
atcctctgctacatattcggctggagtcatgggtccctacatgtgtactc
tttggttggtggtttagtccctggagctctgggggggggggggggctggc
tggttgatattgttctttatatggggttagggttgcaaaccctttctgct
tcttcagtttctttctcttacttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_28890537_28891582
seq2: B6Ng01-272P11.b_45_1090

seq1  GAATTCCTGTAATCATGGGTGTCACACTGATTCATTAAGGAAACTAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTAATCATGGGTGTCACACTGATTCATTAAGGAAACTAAAAC  50

seq1  CCCCCAAATTGTATAGTATCCCCCAACGACAAACACGAGCCATATTATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAAATTGTATAGTATCCCCCAACGACAAACACGAGCCATATTATCA  100

seq1  GGAAAATGGATAGAGATGACTATGATCTTTTAAGTAAATTAAACCTAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATGGATAGAGATGACTATGATCTTTTAAGTAAATTAAACCTAGTT  150

seq1  CAGAAGTATAAGTATTATCAGGTTTATTTCCTTATAAAATTTAATATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTATAAGTATTATCAGGTTTATTTCCTTATAAAATTTAATATTTA  200

seq1  AGAAGCAAATACTAGTAAATAATGTATGAAGAAGAGGATGGGGAAGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAAATACTAGTAAATAATGTATGAAGAAGAGGATGGGGAAGAAAG  250

seq1  GATCAGTGAGAGAAGTTGATAAATGGCATGGGAATTATCATGATTTATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTGAGAGAAGTTGATAAATGGCATGGGAATTATCATGATTTATTA  300

seq1  CACTGTTTTTAATTTTATACGTGTGTGTTGGAATATATATGAAACACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTTTTTAATTTTATACGTGTGTGTTGGAATATATATGAAACACTGT  350

seq1  TGTCTGTGGAATCCAGAAGAGAGCAGAGTATCTGCTCAAACAGGAGTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTGGAATCCAGAAGAGAGCAGAGTATCTGCTCAAACAGGAGTTAC  400

seq1  TGCTTATGAACTATCCAACTTAGGTGCTGGGAATTGAACATGAGTCGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATGAACTATCCAACTTAGGTGCTGGGAATTGAACATGAGTCGTTT  450

seq1  GGATAAGCAGTAGGTGTTCTTCAATGTTAAGCTAAAATAAATTAGTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAGCAGTAGGTGTTCTTCAATGTTAAGCTAAAATAAATTAGTTTTT  500

seq1  TTGTTTTAAATTGCAACATTCCATATTTATGCCTGTTTTAAAATTTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTAAATTGCAACATTCCATATTTATGCCTGTTTTAAAATTTATTA  550

seq1  TACCCCTTACAGTTGGTGCCTGCTCCAGGCCATCTTGGGCAGGAACTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCTTACAGTTGGTGCCTGCTCCAGGCCATCTTGGGCAGGAACTTGG  600

seq1  CAGACGGTCCCACCATCCCCAGAGGACTCTCCACACTGCAGACACCCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACGGTCCCACCATCCCCAGAGGACTCTCCACACTGCAGACACCCTAG  650

seq1  CAAGCCCAGGATCTTAGGATCACTGGTGAGTGGAACACAACATCTGTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCAGGATCTTAGGATCACTGGTGAGTGGAACACAACATCTGTTCC  700

seq1  AAACCAACCATGAGAGACCTGTGCCAGCAGAAGCAAGGACATAGGAGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAACCATGAGAGACCTGTGCCAGCAGAAGCAAGGACATAGGAGCCC  750

seq1  TGCCTGACCACAGGCTCAGGTTCCTTCTGGTCAGTGCTGTTATACCTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGACCACAGGCTCAGGTTCCTTCTGGTCAGTGCTGTTATACCTTAG  800

seq1  TTTTGAATACAGCGGACAGCCCCATGATCCCCAGAGGAGACACCAATTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAATACAGCGGACAGCCCCATGATCCCCAGAGGAGACACCAATTCC  850

seq1  AGGCACTATGAGACGCACAAGATCTTAGGATTCCAGGATTCCAGAAGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTATGAGACGCACAAGATCTTAGGATTCCAGGATTCCAGAAGCCC  900

seq1  AGGAGCTTGGTCACACCAGGATCTCAGGGTCTCAGAGGAAGCTTGACTGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTTGGTCACACCAGGATCTCAGGGTCTCAGAGGAAGCTTGACTGC  950

seq1  CAAGAACTCAGAATCTCATGTTCACAGGATCCTGGAATCA-CCGGATCAC  999
      | |||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCAGAACTCAGAATCTCATGTTCACAGGATCCTGGAATCACCCGGATCAC  1000

seq1  AAAGAAATCTGGACACTGAGGAGTCCCGAATCAACTGGGATTACAGG  1046
       |||||||||||||||||  |||||||||||||||||||||||||||
seq2  -AAGAAATCTGGACACTGGAGAGTCCCGAATCAACTGGGATTACAGG  1046


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