BAC Information

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BAC

Clone NameB6Ng01-273O12
Chromosome15 (Build37)
Map Location 57,094,709 - 57,095,466
singlet/doubletsinglet
Overlap geneBC026439
Upstream geneHas2, EG594843, LOC435442, LOC100040067, LOC100039984
Downstream geneZhx2, Derl1, Wdr67, BC030396, 9130401M01Rik, Zhx1, Atad2, LOC665244, 2410187C16Rik, Fbxo32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273O12.bB6Ng01-273O12.g
ACCGA075354GA075355
length1,186759
definitionB6Ng01-273O12.b B6Ng01-273O12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatacggaatggctgagaagtacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
gcattgtaagcttgtacaactactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatccagcaatatctctcctgggc
acatatccagaagatgttctaactggtaagaaggacacatgctccactat
gttcatagcagccttatatataataggcagaagctggaaagagcccagat
gtccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaaaatgaatttatggaattcctaggcaag
tggacggacctggagggcatcatcctgagtgagttaacccaatcacaaaa
gaactcacttgatatgtactcactgataagtggatattagcccagaaact
tagaatacccaagatacaagatacaatctgcgaaacaaatgaacctcaag
aagaatgaagaccaaaatgtggacactttgccctttcttagaattgagat
caatacacccatggaatgagttacagagacaaaatttggagctgagatga
aaagatggaccatctagagactgacataccccgggattcatcccataatc
agcctccaaatgctgacaccattgcatacactagcaagattttgctgaat
ggatccagatacagctgtctcttgtgagactatgccagggcctagcaaac
acagaagtggatgctcacagtcagctattggatgaatcacagggtcccca
atggaggagctagagaaagtatccaggagctaaagggattctgcaaccct
ataggaggaccacaatatgaactaccagtagcccccacccaaagagctca
tgtttctagctgcattatgtattcagaaaatggcctagtccgccatcatt
gacggaaagttcttcatagtcttgcaacctttatatgccttcagtacagg
ggaaactccagggtccagaaagttattggtcaggta
gaattcttcgttattatgaaaaaatatactgctgtcaatgctgtgaaaag
caaactgtttgttctttttaatatgcagggaaggaatgtgcattttgttg
agaaaatagtaactatttaaatttttgaatatctggtccagaaaagatat
atatataaattaataaagtcatgattttgaatttgtgttttctatactat
tgtatctatgcctctacatctagcatttgcaagaatagccatggattttg
atgaaattctacatcatgtaggtgacagtggaagatttcagatttgtatg
atcatccttctcaacattttatccttggtgttatcccctcatgatgtcct
ggagaattttacagcagccatccctgctcatcactgtagtataaaccttg
acaattcaagatctgaagttagtactgacatgaacttaactactgaagat
ttgatgaaggtctccatcccaatgggcccaaatcagaaacccgagcaatg
ccgacgctttaggtacacccaatggcaatttttagattccaacatatcaa
cttttaacagcactgagctagagactgagccgtgtctagatggatggaca
tatgaccacagtgtttttacttctaccattgtcactgaggtacgatgttt
aaatatagtgatgtctagtgaattgactatagaaccttgacatctagtaa
tgagatgtaagatagttttcacaaaacattgagactaaggaaggggaata
agtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_57094709_57095466
seq2: B6Ng01-273O12.g_68_826 (reverse)

seq1  ACACACACTTA-TCCCCTTCCTTAGTCTCAATGTTTTGTGAAAACTATCT  49
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACACACACTTATTCCCCTTCCTTAGTCTCAATGTTTTGTGAAAACTATCT  50

seq1  TACATCTCATTACTAGATGTCAAGGTTCTATAGTCAATTCACTAGACATC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTCATTACTAGATGTCAAGGTTCTATAGTCAATTCACTAGACATC  100

seq1  ACTATATTTAAACATCGTACCTCAGTGACAATGGTAGAAGTAAAAACACT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATATTTAAACATCGTACCTCAGTGACAATGGTAGAAGTAAAAACACT  150

seq1  GTGGTCATATGTCCATCCATCTAGACACGGCTCAGTCTCTAGCTCAGTGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCATATGTCCATCCATCTAGACACGGCTCAGTCTCTAGCTCAGTGC  200

seq1  TGTTAAAAGTTGATATGTTGGAATCTAAAAATTGCCATTGGGTGTACCTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAAGTTGATATGTTGGAATCTAAAAATTGCCATTGGGTGTACCTA  250

seq1  AAGCGTCGGCATTGCTCGGGTTTCTGATTTGGGCCCATTGGGATGGAGAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGTCGGCATTGCTCGGGTTTCTGATTTGGGCCCATTGGGATGGAGAC  300

seq1  CTTCATCAAATCTTCAGTAGTTAAGTTCATGTCAGTACTAACTTCAGATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCAAATCTTCAGTAGTTAAGTTCATGTCAGTACTAACTTCAGATC  350

seq1  TTGAATTGTCAAGGTTTATACTACAGTGATGAGCAGGGATGGCTGCTGTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTGTCAAGGTTTATACTACAGTGATGAGCAGGGATGGCTGCTGTA  400

seq1  AAATTCTCCAGGACATCATGAGGGGATAACACCAAGGATAAAATGTTGAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTCCAGGACATCATGAGGGGATAACACCAAGGATAAAATGTTGAG  450

seq1  AAGGATGATCATACAAATCTGAAATCTTCCACTGTCACCTACATGATGTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGATCATACAAATCTGAAATCTTCCACTGTCACCTACATGATGTA  500

seq1  GAATTTCATCAAAATCCATGGCTATTCTTGCAAATGCTAGATGTAGAGGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCATCAAAATCCATGGCTATTCTTGCAAATGCTAGATGTAGAGGC  550

seq1  ATAGATACAATAGTATAGAAAACACAAATTCAAAATCATGACTTTATTAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATACAATAGTATAGAAAACACAAATTCAAAATCATGACTTTATTAA  600

seq1  TTTATATATATATCTTTTCTGGACCAGATATTCAAAAATTTAAATAGTTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATATATATCTTTTCTGGACCAGATATTCAAAAATTTAAATAGTTA  650

seq1  CTATTTTCTCAACAAAATGCACATTCCTTCCCTGCATATTAAAAAGAACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTCTCAACAAAATGCACATTCCTTCCCTGCATATTAAAAAGAACA  700

seq1  AACAGTTTGCTTTTCACAGCATTGACAGCAGTATATTTTTTCATAATAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTTGCTTTTCACAGCATTGACAGCAGTATATTTTTTCATAATAAC  750

seq1  GAAGAATTC  758
      |||||||||
seq2  GAAGAATTC  759