BAC Information

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BAC

Clone NameB6Ng01-274D24
Chromosome15 (Build37)
Map Location 28,812,476 - 28,964,795
singlet/doubletdoublet
Overlap genenone
Upstream geneTrio, LOC667126, Dnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
Downstream geneLOC382975
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274D24.bB6Ng01-274D24.g
ACCGA075603GA075604
length1,039928
definitionB6Ng01-274D24.b B6Ng01-274D24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,963,601 - 28,964,795)(28,812,476 - 28,813,201)
sequence
gaattcatagttcacaagtcagatgtaggtctgaactcatggaatgacca
cttgggttctctgttttcccagacctgaatggtgggaccatcctctccag
tccctgtagtctgatctgagcattctgcctcttctctcagcgttagctac
ttgctgactggcactgtgctcttgtctccccaattgactccacctcatat
aacacacttcttctctacctgtcactgctctaccaccttggaaaagctac
agagttatctcagagctgaccagtagcaacatatgagaccttgcatagtt
tcccttcaacagggttgtggtggcttccttgggacaagagttccagaatg
accactctcacctgacccactaggataccatatcatacatgattccctgg
aaggccatttacttccagtaaccagcagtattcattgaaggttaatgtaa
tttaaactgtgaatttacgttctgaattatttgttaaatagctgtagcat
tatttttatctaatgaatgtgaattttaatccaatataacttttggtttt
ataactacagacaaatatatggtaaaatatactagctataaaagtattat
cagctagtcaccatatactagctataaaagtattatcagtcaggcatcat
ccattcagagtgaatagaaatcttttgaatatttcaccaggaaaaaaaat
acaaaataaatgaaataaacagatgagatgctaaggcagtttggttacca
gccacagtatgaaacaggaccaacccagggcagaagtgaagaagccgcta
cagggctcccagacttcaggtggaaacatagatgagattctctttctaaa
ctacaccctaaagcagaaaaattcaaagctccagagatgggaggctcctg
tcaccccatctctccacacagcctgccactgtattctttttttttttttt
aagatttttaaggagcagtttataacattcaattttacattctaatactt
taatgcaatttttcttataacacacagcatcaaattgta

gaattcttacatctatattcataaggggaattagtctgaaatatctcatt
tttctttgttaagtctttatgtgggttagatatcagggtaactatgacct
tagaaagcaaattgggaatgttccttctgtttctattttgcacaatagtc
taagtaatattggcaataatatttctttgaaattctggtagaacccttca
ttaaaatatctgtccttgggttttattctattattattattattattatt
attattattattattacttggtttagtagacttttaatacctgattctat
ttcactaagtatgttttttatttcttgcttgatctcatttaatttggtag
tatgtatgtatcaagatgctttaccatctcttttagggtttacaatttgg
tttaatacatatttttaaagtatatacttatgattttgtagatttcattg
atgtctgtttttctattttcatctctacattcattaattttgatattcta
tatctgtattgaagatcatttggctacatatttcaatcttactaattttc
tcaaagaataatttgttttattgattatttgcattgatatttttatattt
attttacttacttcaggcctgagtttgattatttcttgtcatcttcttca
ggtatttcttctttttttgttcttgggctttcaggcattctgttaaattt
tgaattcatgtaagtgggatgtactttagtcttataaagtgatagaggtc
acagaattttctagttagatcctaatgtctaatatttgaaatcatatcca
gaaattaatatgggaattagaaattacgcctactacagtgataatgaaaa
aaaaaatacatgtatatccttaaaagatcacattcacttgattcactcaa
gttccctaagatttcaatggtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_28963601_28964795
seq2: B6Ng01-274D24.b_42_1227 (reverse)

seq1  TCTCTGTTTTCTCCGTGTGCCAAAATATAACCTTTGCCTGCCCTTACACA  50
      |||| |||||||||||||| |||||| |||||  || ||  | ||  || 
seq2  TCTCCGTTTTCTCCGTGTG-CAAAAT-TAACC--TGGCTTGCGTT--ACC  44

seq1  ACCGTGCTCATTCAGGGAACTCTACTCTGTTAAGAATACAGTGGCACAAT  100
      |||||||||||||| || ||  ||||| ||| || |||||||||||||||
seq2  ACCGTGCTCATTCAAGGTACCTTACTCCGTTTAG-ATACAGTGGCACAAT  93

seq1  CAACACTTAGAACAAGGGCTTGCCTAATTGAATGATGGCACA--AAATGT  148
      | |||||||| |||  ||||||||| |||||||||| |||||        
seq2  C-ACACTTAG-ACA--GGCTTGCCTTATTGAATGAT-GCACANNNNNNNN  138

seq1  GCCTTTTTATACAATTTTGATGCTGTGTGTTAT-AGAAAAATTGCATTTA  197
               ||||| |||||||||||||||||| |||||||||||| |||
seq2  NNNNNNNNNTACAA-TTTGATGCTGTGTGTTATAAGAAAAATTGCA-TTA  186

seq1  AAGTATTAGAATGTAAAATTGAATGTTATAAACTGCTCTTTAAAAATCTT  247
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAGTATTAGAATGTAAAATTGAATGTTATAAACTGCTCCTTAAAAATCTT  236

seq1  AAAAAAAAAAAAAAGAATACAGTGGCAGGCTGTGTGGAGAGATGGGGTGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAGAATACAGTGGCAGGCTGTGTGGAGAGATGGGGTGA  286

seq1  CAGGAGCCT-CCATCTCTGGAGCTTTGAA-TTTTCTGCTTTAGGGTGTAG  345
      ||||||||| ||||||||||||||||||| ||||||||||||||||||||
seq2  CAGGAGCCTCCCATCTCTGGAGCTTTGAATTTTTCTGCTTTAGGGTGTAG  336

seq1  TTTAGAAAGAGAATCTCATCTATGTTTCCACCTGAAGTCTGGGAGCCCTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAAGAGAATCTCATCTATGTTTCCACCTGAAGTCTGGGAGCCCTG  386

seq1  TAGCGGCTTCTTCACTTCTGCCCTGGGTTGGTCCTGTTTCATACTGTGGC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGGCTTCTTCACTTCTGCCCTGGGTTGGTCCTGTTTCATACTGTGGC  436

seq1  TGGTAACCAAACTGCCTTAGCATCTCATCTGTTTATTTCATTTATTTTGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAACCAAACTGCCTTAGCATCTCATCTGTTTATTTCATTTATTTTGT  486

seq1  ATTTTTTTTCCTGGTGAAATATTCAAAAGATTTCTATTCACTCTGAATGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTCCTGGTGAAATATTCAAAAGATTTCTATTCACTCTGAATGG  536

seq1  ATGATGCCTGACTGATAATACTTTTATAGCTAGTATATGGTGACTAGCTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCCTGACTGATAATACTTTTATAGCTAGTATATGGTGACTAGCTG  586

seq1  ATAATACTTTTATAGCTAGTATATTTTACCATATATTTGTCTGTAGTTAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACTTTTATAGCTAGTATATTTTACCATATATTTGTCTGTAGTTAT  636

seq1  AAAACCAAAAGTTATATTGGATTAAAATTCACATTCATTAGATAAAAATA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAAAGTTATATTGGATTAAAATTCACATTCATTAGATAAAAATA  686

seq1  ATGCTACAGCTATTTAACAAATAATTCAGAACGTAAATTCACAGTTTAAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTACAGCTATTTAACAAATAATTCAGAACGTAAATTCACAGTTTAAA  736

seq1  TTACATTAACCTTCAATGAATACTGCTGGTTACTGGAAGTAAATGGCCTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTAACCTTCAATGAATACTGCTGGTTACTGGAAGTAAATGGCCTT  786

seq1  CCAGGGAATCATGTATGATATGGTATCCTAGTGGGTCAGGTGAGAGTGGT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGAATCATGTATGATATGGTATCCTAGTGGGTCAGGTGAGAGTGGT  836

seq1  CATTCTGGAACTCTTGTCCCAAGGAAGCCACCACAACCCTGTTGAAGGGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGGAACTCTTGTCCCAAGGAAGCCACCACAACCCTGTTGAAGGGA  886

seq1  AACTATGCAAGGTCTCATATGTTGCTACTGGTCAGCTCTGAGATAACTCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGCAAGGTCTCATATGTTGCTACTGGTCAGCTCTGAGATAACTCT  936

seq1  GTAGCTTTTCCAAGGTGGTAGAGCAGTGACAGGTAGAGAAGAAGTGTGTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTTTTCCAAGGTGGTAGAGCAGTGACAGGTAGAGAAGAAGTGTGTT  986

seq1  ATATGAGGTGGAGTCAATTGGGGAGACAAGAGCACAGTGCCAGTCAGCAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGGTGGAGTCAATTGGGGAGACAAGAGCACAGTGCCAGTCAGCAA  1036

seq1  GTAGCTAACGCTGAGAGAAGAGGCAGAATGCTCAGATCAGACTACAGGGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTAACGCTGAGAGAAGAGGCAGAATGCTCAGATCAGACTACAGGGA  1086

seq1  CTGGAGAGGATGGTCCCACCATTCAGGTCTGGGAAAACAGAGAACCCAAG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGAGGATGGTCCCACCATTCAGGTCTGGGAAAACAGAGAACCCAAG  1136

seq1  TGGTCATTCCATGAGTTCAGACCTACATCTGACTTGTGAACTATGAATTC  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATTCCATGAGTTCAGACCTACATCTGACTTGTGAACTATGAATTC  1186


seq1: chr15_28812476_28813201
seq2: B6Ng01-274D24.g_268_993

seq1  AAAATATCTGTCCTTGGGTTTTATTCTATTATTATTATTATTATTATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATCTGTCCTTGGGTTTTATTCTATTATTATTATTATTATTATTAT  50

seq1  TATTATTATTATTACTTGGTTTAGTAGACTTTTAATACCTGATTCTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTATTACTTGGTTTAGTAGACTTTTAATACCTGATTCTATTT  100

seq1  CACTAAGTATGTTTTTTATTTCTTGCTTGATCTCATTTAATTTGGTAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGTATGTTTTTTATTTCTTGCTTGATCTCATTTAATTTGGTAGTA  150

seq1  TGTATGTATCAAGATGCTTTACCATCTCTTTTAGGGTTTACAATTTGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTATCAAGATGCTTTACCATCTCTTTTAGGGTTTACAATTTGGTT  200

seq1  TAATACATATTTTTAAAGTATATACTTATGATTTTGTAGATTTCATTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACATATTTTTAAAGTATATACTTATGATTTTGTAGATTTCATTGAT  250

seq1  GTCTGTTTTTCTATTTTCATCTCTACATTCATTAATTTTGATATTCTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTTTTCTATTTTCATCTCTACATTCATTAATTTTGATATTCTATA  300

seq1  TCTGTATTGAAGATCATTTGGCTACATATTTCAATCTTACTAATTTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATTGAAGATCATTTGGCTACATATTTCAATCTTACTAATTTTCTC  350

seq1  AAAGAATAATTTGTTTTATTGATTATTTGCATTGATATTTTTATATTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATAATTTGTTTTATTGATTATTTGCATTGATATTTTTATATTTAT  400

seq1  TTTACTTACTTCAGGCCTGAGTTTGATTATTTCTTGTCATCTTCTTCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTACTTCAGGCCTGAGTTTGATTATTTCTTGTCATCTTCTTCAGG  450

seq1  TATTTCTTCTTTTTTTGTTCTTGGGCTTTCAGGCATTCTGTTAAATTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTCTTTTTTTGTTCTTGGGCTTTCAGGCATTCTGTTAAATTTTG  500

seq1  AATTCATGTAAGTGGGATGTACTTTAGTCTTATAAAGTGATAGAGGTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATGTAAGTGGGATGTACTTTAGTCTTATAAAGTGATAGAGGTCAC  550

seq1  AGAATTTTCTAGTTAGATCCTAATGTCTAATATTTGAAATCATATCCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTTCTAGTTAGATCCTAATGTCTAATATTTGAAATCATATCCAGA  600

seq1  AATTAATATGGGAATTAGAAATTACGCCTACTACAGTGATAATGAAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATATGGGAATTAGAAATTACGCCTACTACAGTGATAATGAAAAAA  650

seq1  AAAATACATGTATATCCTTAAAAGATCACATTCACTTGATTCACTCAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACATGTATATCCTTAAAAGATCACATTCACTTGATTCACTCAAGT  700

seq1  TCCCTAAGATTTCAATGGTGTGTGTG  726
      ||||||||||||||||||||||||||
seq2  TCCCTAAGATTTCAATGGTGTGTGTG  726


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