BAC Information

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BAC

Clone NameB6Ng01-275A23
Chromosome15 (Build37)
Map Location 20,381,621 - 20,382,735
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666875, LOC621884, LOC100040265
Downstream geneAcot10, LOC100040302, Cdh12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275A23.b
ACCGA076199
length1,094
definitionB6Ng01-275A23.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatgtttatacatagaagaacttttttgttatttaataataat
tatcaaaacattggaacctttaattacatcacaaattgaagatgttatca
agcatgtctaaaactagccccatacttcacaggtgagtccttctaacact
ggctactgacatcatcaactctgaggaaaagtgtatgcccccttttgaca
tctgagcatatcagttagagaatggtgtgtaagccctccccttttctatg
agtatctgtgctcactcttaagcctcagcttttcactatagttctagaca
tatgtgcatgaaatgtattctttttaaacataattttccatatatggtgt
ctatatatggtaacataattttctgtatatggtgaatatataggtatcta
tttattcttggtaatgtgaactactttataaaagagtcatgtagctattt
atagaataaaggttacacctgaaaatcagtggaaagaaaataactggtgc
atagcaaagatttaatttatcccatattgtaaactctaatatgttaatgc
aatgaaaactgtaataaaactgaatgtatagcatagtgtgtccttgctct
ggttttgatatggttagggtatgattgtcaaagttcatgataaaacataa
tcaatgtataattgagttttgagaacgtgtgtcaagaatatcataaaagg
agaattacatcatgtagaattcatttttattcaatttttctttgggcaca
tctttcacttgtcctaagactaaatgttatttattccatattgcttgtga
tatgctactgtaactttaaggaatcatgatcatgctatacagaggcggta
tcacaatcacacacacatttccctttaatagtgtggttgcggtgtaacaa
cccttctgcatagcaatttaggaaaaagacatttgcctaaaactcaaagt
gatttttaacagtgctaccctttaaaatacttaccacttgtcatcataag
aatagaaagccaagtattcataacttacctttgtgtaatgaaatatcatt
tcaataatattttattcatcataaagcagagcattttttaaagc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_20381621_20382735
seq2: B6Ng01-275A23.b_42_1135 (reverse)

seq1  GCTTTAAAATATTGGCTCTTGCTTTTATGATGAATAAAATTATTATTGGA  50
      ||||||||| ||  |||| ||| |||||||||||||||| ||||||||  
seq2  GCTTTAAAAAAT--GCTC-TGC-TTTATGATGAATAAAA-TATTATTG--  43

seq1  AAATGAATTATTTCATTACACAAGGGTTAAAGTTTAAGGAATTAACTTGG  100
      ||||||  ||||||||||||||| |||  |||||  | ||||  |||| |
seq2  AAATGA--TATTTCATTACACAAAGGT--AAGTT--ATGAAT--ACTT-G  84

seq1  GCTTTCTTATTCCTTATTGATGACAAGTGGTAAGTATTTTAAAGGGTAGC  150
      |||||| |||| |||| |||||||||||||||||||||||||||||||||
seq2  GCTTTC-TATT-CTTA-TGATGACAAGTGGTAAGTATTTTAAAGGGTAGC  131

seq1  AACTGTTAAAAATCACTTTTGAGTTTTAGGCAAATGTCTTTTTCCTAAAT  200
       ||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  -ACTGTTAAAAATCAC-TTTGAGTTTTAGGCAAATGTCTTTTTCCTAAAT  179

seq1  TGCTATGCAGAAGGGTTGTTACACCGCAACCACACTATTAAAGGGAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGCAGAAGGGTTGTTACACCGCAACCACACTATTAAAGGGAAATG  229

seq1  TGTGTGTGATTGTGATACCGCCTCTGTATAGCATGATCATGATTCCTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGATTGTGATACCGCCTCTGTATAGCATGATCATGATTCCTTAA  279

seq1  AGTTACAGTAGCATATCACAAGCAATATGGAATAAATAACATTTAGTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACAGTAGCATATCACAAGCAATATGGAATAAATAACATTTAGTCTT  329

seq1  AGGACAAGTGAAAGATGTGCCCAAAGAAAAATTGAATAAAAATGAATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAAGTGAAAGATGTGCCCAAAGAAAAATTGAATAAAAATGAATTCT  379

seq1  ACATGATGTAATTCTCCTTTTATGATATTCTTGACACACGTTCTCAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATGTAATTCTCCTTTTATGATATTCTTGACACACGTTCTCAAAAC  429

seq1  TCAATTATACATTGATTATGTTTTATCATGAACTTTGACAATCATACCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTATACATTGATTATGTTTTATCATGAACTTTGACAATCATACCCT  479

seq1  AACCATATCAAAACCAGAGCAAGGACACACTATGCTATACATTCAGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATATCAAAACCAGAGCAAGGACACACTATGCTATACATTCAGTTTT  529

seq1  ATTACAGTTTTCATTGCATTAACATATTAGAGTTTACAATATGGGATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGTTTTCATTGCATTAACATATTAGAGTTTACAATATGGGATAAA  579

seq1  TTAAATCTTTGCTATGCACCAGTTATTTTCTTTCCACTGATTTTCAGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCTTTGCTATGCACCAGTTATTTTCTTTCCACTGATTTTCAGGTG  629

seq1  TAACCTTTATTCTATAAATAGCTACATGACTCTTTTATAAAGTAGTTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTTATTCTATAAATAGCTACATGACTCTTTTATAAAGTAGTTCAC  679

seq1  ATTACCAAGAATAAATAGATACCTATATATTCACCATATACAGAAAATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCAAGAATAAATAGATACCTATATATTCACCATATACAGAAAATTA  729

seq1  TGTTACCATATATAGACACCATATATGGAAAATTATGTTTAAAAAGAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACCATATATAGACACCATATATGGAAAATTATGTTTAAAAAGAATA  779

seq1  CATTTCATGCACATATGTCTAGAACTATAGTGAAAAGCTGAGGCTTAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCATGCACATATGTCTAGAACTATAGTGAAAAGCTGAGGCTTAAGA  829

seq1  GTGAGCACAGATACTCATAGAAAAGGGGAGGGCTTACACACCATTCTCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCACAGATACTCATAGAAAAGGGGAGGGCTTACACACCATTCTCTA  879

seq1  ACTGATATGCTCAGATGTCAAAAGGGGGCATACACTTTTCCTCAGAGTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATATGCTCAGATGTCAAAAGGGGGCATACACTTTTCCTCAGAGTTG  929

seq1  ATGATGTCAGTAGCCAGTGTTAGAAGGACTCACCTGTGAAGTATGGGGCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTCAGTAGCCAGTGTTAGAAGGACTCACCTGTGAAGTATGGGGCT  979

seq1  AGTTTTAGACATGCTTGATAACATCTTCAATTTGTGATGTAATTAAAGGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAGACATGCTTGATAACATCTTCAATTTGTGATGTAATTAAAGGT  1029

seq1  TCCAATGTTTTGATAATTATTATTAAATAACAAAAAAGTTCTTCTATGTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATGTTTTGATAATTATTATTAAATAACAAAAAAGTTCTTCTATGTA  1079

seq1  TAAACATGAGAATTC  1115
      |||||||||||||||
seq2  TAAACATGAGAATTC  1094


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