BAC Information

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BAC

Clone NameB6Ng01-275B06
Chromosome15 (Build37)
Map Location 53,723,414 - 53,724,556
singlet/doubletsinglet
Overlap geneSamd12
Upstream geneLOC100039745, Ext1, EG665097
Downstream geneEG621631, Tnfrsf11b, LOC665280, EG383032, Colec10, Mal2, Nov, LOC665302, LOC100039816, Enpp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275B06.bB6Ng01-275B06.g
ACCGA076212GA076213
length1,2081,124
definitionB6Ng01-275B06.b B6Ng01-275B06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtgccccatattttaatgggttatttgaatt
tctaggttcagcttcttgagctctttgtatatattggatattagtcccct
attagatttaggattggtaaagatcctttcccaatctgttggtggccttt
ttgtcttattgacagtatcttttgccctacagaagctttgcaattttatg
aggtcccattagtcaattctcaatcttacagtgcaagccattactcttct
gtttagggatttttccccctgtacccatatcatcaagggttttccccact
ttctcctctataaatttcagtgtctctggttttatgtggaattctttgat
ccacttagacttgagctttgtacaaggagataagaatggatcaatttgaa
ttcttctacatgataaccgccagttgtgccagcaccatgtgttgaaaata
ctgccttttttccattggatggtttcagctcccttgtcaaagatcaggtg
accataagtgtgtgggttcaattctgggtcttcaaatctattccattgat
ctacctgtctgtctctataccagtaccatgcagttttcatcacaattgct
ctgtggtgcagcttgaggtcaggcatggtgattcccagaggttcttttgt
tgttgagaatagtttttgctatcctagggttttttttgttattccagatg
agtttgcaaattgtcttttctaactcagtgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattacttttggcaagatacccattt
ttactatattgatcctgccaatccatgagcatgggagacctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagctgttatcatt
cagatctttcacttccttagagtcacaccaaaggtattttatattatttg
tgaaggttgtgttctctatttctttctcatcctgtttatcctttgtaaag
agaaaggctattttattttgtttgagtaattatatccagctactgtgcag
aagctgtttatcagtttggagtctctgggtgaattttgaggtcactacat
atactatcatttatattaacctatcgtttcgattctggcaaattggaatt
tgccttcctgcattccaattgtaatcccatgagactctccatcttttgtg
ttgggtca
gaattcactatgtaaaccagctggcctcaaattcacagagatccacatgc
ctctgtctcccaagttctgggattaaaggcatggaccactacacatggct
agagcatgaatccttgattgaactgattaataaccaggagggaaagtctc
aatgaccctagaactgtctataccactgggtgccattaatgaggtacaac
atatagaaggcacgtaagtatccattatcaaagaaaaataccaattatca
gtaattacaggctggatgaatttggataccaggatgggcaaaccatggca
ataaaagccaagacgcagtgttctatatgaacagatacaaatgcatagtg
atcgatctaggctcacaaaaattagagacttactccaacaacttagaaga
aatgtctgtaagaaagagcacaattaatatcttatttttatactgtccat
cataaatcactaaggtttctaaaagacaactagtaaacaaaattcaaatt
accaaattggaacatgccaaaataaaaacaacacaatgttaggaaaatgc
aatgacctttaaatctggcaaatattcccacaaagcccacactggctgag
aagttgtgtagatttataaaagtgttttattatgaatccaatttccctca
gtgctcagatggggtgtgtatggggatcacatataagcgtccaggaaaga
ctatttgtgaaagtgcagcccagttgcagcaagagaaccaagcagtttgg
agtcatcaataccatgagatgaccacgaagaatagccgcagtggtgaaag
agagccagcagagcctggaagttaggcagtgtgtgctgcagagggtggag
ccaggcaagtgacccaagcccttgggaagagctcagaagatctcgaatgt
atcacagacattggatattgcgttgtttacacggtggtgaaacttttaaa
gttgtatgttttatatgtgaagttagtattaacatgctgtcttggggata
atgagaggaaaggttctgagtgaaagcatgtgtttacatgtcagttgaca
agtttcagtgtgatgcctactcatccactgaacacagttagatcatcaag
aggaaggtctactagagaaacggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_53723414_53724556
seq2: B6Ng01-275B06.g_74_1197

seq1  GAATTCACTATGTAAACCAGCTGGCCTCAAATTCACAGAGATCCACATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTAAACCAGCTGGCCTCAAATTCACAGAGATCCACATGC  50

seq1  CTCTGTCTCCCAAGTTCTGGGATTAAAGGCATGGACCACTACACATGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCCCAAGTTCTGGGATTAAAGGCATGGACCACTACACATGGCT  100

seq1  AGAGCATGAATCCTTGATTGAACTGATTAATAACCAGGAGGGAAAGTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATGAATCCTTGATTGAACTGATTAATAACCAGGAGGGAAAGTCTC  150

seq1  AATGACCCTAGAACTGTCTATACCACTGGGTGCCATTAATGAGGTACAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCCTAGAACTGTCTATACCACTGGGTGCCATTAATGAGGTACAAC  200

seq1  ATATAGAAGGCACGTAAGTATCCATTATCAAAGAAAAATACCAATTATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAAGGCACGTAAGTATCCATTATCAAAGAAAAATACCAATTATCA  250

seq1  GTAATTACAGGCTGGATGAATTTGGATACCAGGATGGGCAAACCATGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTACAGGCTGGATGAATTTGGATACCAGGATGGGCAAACCATGGCA  300

seq1  ATAAAAGCCAAGACGCAGTGTTCTATATGAACAGATACAAATGCATAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGCCAAGACGCAGTGTTCTATATGAACAGATACAAATGCATAGTG  350

seq1  ATCGATCTAGGCTCACAAAAATTAGAGACTTACTCCAACAACTTAGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGATCTAGGCTCACAAAAATTAGAGACTTACTCCAACAACTTAGAAGA  400

seq1  AATGTCTGTAAGAAAGAGCACAATTAATATCTTATTTTTATACTGTCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTGTAAGAAAGAGCACAATTAATATCTTATTTTTATACTGTCCAT  450

seq1  CATAAATCACTAAGGTTTCTAAAAGACAACTAGTAAACAAAATTCAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATCACTAAGGTTTCTAAAAGACAACTAGTAAACAAAATTCAAATT  500

seq1  ACCAAATTGGAACATGCCAAAATAAAAACAACACAATGTTAGGAAAATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATTGGAACATGCCAAAATAAAAACAACACAATGTTAGGAAAATGC  550

seq1  AATGACCTTTAAATCTGGCAAATATTCCCACAAAGCCCACACTGGCTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCTTTAAATCTGGCAAATATTCCCACAAAGCCCACACTGGCTGAG  600

seq1  AAGTTGTGTAGATTTATAAAAGTGTTTTATTATGAATCCAATTTCCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTGTAGATTTATAAAAGTGTTTTATTATGAATCCAATTTCCCTCA  650

seq1  GTGCTCAGATGGGGTGTGTATGGGGATCACATATAAGCGTCCAGGAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCAGATGGGGTGTGTATGGGGATCACATATAAGCGTCCAGGAAAGA  700

seq1  CTATTTGTGAAAGTGCAGCCCAGTTGCAGCAAGAGAACCAAGCAGTTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGTGAAAGTGCAGCCCAGTTGCAGCAAGAGAACCAAGCAGTTTGG  750

seq1  AGTCATCAATACCATGAGATGACCACGAAGAATAGCCGCAGTGGTGAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATCAATACCATGAGATGACCACGAAGAATAGCCGCAGTGGTGAAAG  800

seq1  AGAGCCAGCAGGAGCCTGGAAGTTAGGCAGTGTGTGCTGCAGAGGGTGGA  850
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAGCA-GAGCCTGGAAGTTAGGCAGTGTGTGCTGCAGAGGGTGGA  849

seq1  GCCAGGCAAGTGACCCAAGCCCTTGGGAAGAGCTCAGAAGATCTCGAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCAAGTGACCCAAGCCCTTGGGAAGAGCTCAGAAGATCTCGAATG  899

seq1  TATCACAGACATTGGATATTGCGTTGTTTACACGGTTGGTGAAACTTTTA  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TATCACAGACATTGGATATTGCGTTGTTTACACGG-TGGTGAAACTTTTA  948

seq1  AAGTTGTATGTTTTATATTGTGAAGTTAGTATTAACATGCTGTCTTGGGG  1000
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAGTTGTATGTTTTATA-TGTGAAGTTAGTATTAACATGCTGTCTTGGGG  997

seq1  ATAAATGAGGAAGGAAAGGTTCTGAGTGAAAAGCAATGTGTTTACATGTC  1050
      || ||||||  ||||||||||||||||| ||||| |||||||||||||||
seq2  AT-AATGAG--AGGAAAGGTTCTGAGTG-AAAGC-ATGTGTTTACATGTC  1042

seq1  AAGTTGACAAAGGTTCAGTTGTGATGGCTACTCATTCAACTTGACACAAG  1100
       ||||||| ||| ||||| ||||||| ||||||| || |||  |||| ||
seq2  -AGTTGAC-AAGTTTCAG-TGTGATGCCTACTCA-TCCACTGAACAC-AG  1087

seq1  GTAGAATCATCAAAGAGGAAAGAACCTC-ACTAGAGAAAACGGC  1143
       ||| |||||| |||||||| |    || ||||||| |||||||
seq2  TTAG-ATCATC-AAGAGGAAGG----TCTACTAGAG-AAACGGC  1124