BAC Information

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BAC

Clone NameB6Ng01-275E18
Chromosome15 (Build37)
Map Location 23,408,717 - 23,409,248
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545091, Cdh18
Downstream geneLOC624863, LOC666989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275E18.bB6Ng01-275E18.g
ACCGA076375GA076376
length1,167526
definitionB6Ng01-275E18.b B6Ng01-275E18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagttgtgacaccatctaaattagtgtttgagcaaatgagagttc
cccatactttagcctaggggatgcatgacattaagcagcccaaagtcaca
caatgagagatgtcaacagtgttatcaaaaatgagtatcagaaaagcaat
tagataaaaaaacgttcaggtcaaatactccaactatgaaaaaagcaatg
tgtctttgactgagatgatgatgaactgggatgcaaagattccctgcgtt
tatatttggttattgggttctgttggttaatgccattcaaatggaagaaa
actagagggagattaatgtggggcagtttaaacaagcattatttttgtaa
aatatctaggaaaattttgaaattatttaattaaaatgttggaattaaat
ttaatcaaaatgtagtcttttcctttccctttcctttctccagcatctct
caggtctctaccctcgaaccactaccattttacctatccccactctcaaa
ttgatagctttataaattttattattattgtcatataatgagttataaat
gtatatgtatataactgaacaaatcaataaatgcaatctgctgagttcat
ttttttttttttttgagtaagtggtttcatgaaccattttatattggaaa
accagtaagagggctcatcattgcaataaacaaaatatccctttccaaca
ataattggtcgtgtataaccccttgtctaaaggtaagcagctccgaatgc
tcctaccttctgtgttaatgggtccatagatcttgcctttttctcagtgt
ttcatgaagccaagtatagactattgatcagctgatttcctcatatttcc
tcttgttctgagtctcgcaaactttccacagcctcttctatgatattctg
tgatgcatagatgcagatataggtacagatagaaatttagatgtatccat
ctgagcggacatcacaccatcttattcatctctggttgtgtttttctatg
atggtatccccttgactgtagaggaaaaaaaaaggcttataagattgtgg
tagaggggagagtcagtagagaaaagaagacgatgagaattaccaatcca
gttccgtgataactaccaaagatacttgaatcggagaatttaattactgt
agcatacgcgcgatgta
agagaaattatgaaattttgatcatcagtatggcagagacatcacaactt
attttttctcatcttcatagttttaaatttaattaaaaatttttatatgc
aagtactatagttacatcatttctgccctgctctctccctatttaaactt
ccccaggtacccgtagcttactgtcaaggttattatttcttgtttaatta
tgatctctctctctctctctctctctctctctctctctgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggttgtttacacatgcaagc
taacagagattcccctgggaatggataacctctcagttgtcttctgtgga
aaagaatgttacttcctgtttcagaaggcatttactttcaattgcttttc
atttatgggtggaatcttacaaaattttaataaagattctttaaaaaaca
tatctgtgagggcatgggagaattaagtcgaatcctgaagctcactgact
atcctattaaatcaattggttaagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_23408717_23409248
seq2: B6Ng01-275E18.g_76_607

seq1  GAATTCAGAGAAATTATGAAATTTTGATCATCAGTATGGCAGAGACATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGAAATTATGAAATTTTGATCATCAGTATGGCAGAGACATCA  50

seq1  CAACTTATTTTTTCTCATCTTCATAGTTTTAAATTTAATTAAAAATTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTATTTTTTCTCATCTTCATAGTTTTAAATTTAATTAAAAATTTTT  100

seq1  ATATGCAAGTACTATAGTTACATCATTTCTGCCCTGCTCTCTCCCTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAAGTACTATAGTTACATCATTTCTGCCCTGCTCTCTCCCTATTT  150

seq1  AAACTTCCCCAGGTACCCGTAGCTTACTGTCAAGGTTATTATTTCTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCCCCAGGTACCCGTAGCTTACTGTCAAGGTTATTATTTCTTGTT  200

seq1  TAATTATGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGT  250

seq1  GTGTGTGTGTGTGTGTAACTTGCTGAGTCAATTTAATGTTGTTTACACAT  300
      ||||||||||||||||   |   || ||   | |   |||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTTGTTTACACAT  300

seq1  GCATGCTAACAGAGATTCCCCTGGGAATGGATAACCTCTCAGTTGTCTTC  350
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTAACAGAGATTCCCCTGGGAATGGATAACCTCTCAGTTGTCTTC  350

seq1  TGTGGAAAAGAATGTTTCTTCCTGTTTCAGAAGGCATTTACTTTCAATTG  400
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGTGGAAAAGAATGTTACTTCCTGTTTCAGAAGGCATTTACTTTCAATTG  400

seq1  CTTTTCATTTATGGGTGGAATCTTACAAAATTTTAATAAAGATTCTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATTTATGGGTGGAATCTTACAAAATTTTAATAAAGATTCTTTAA  450

seq1  AAAACATATCTGTGAGGGCATGGGAGAATTAAGTTGAATCCTGAAGCTCA  500
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAAACATATCTGTGAGGGCATGGGAGAATTAAGTCGAATCCTGAAGCTCA  500

seq1  CTGACTAGCCTATCAAGTCAAGTGGTTAAGTG  532
      ||||||| ||||| || |||| ||||||||||
seq2  CTGACTATCCTATTAAATCAATTGGTTAAGTG  532