BAC Information

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BAC

Clone NameB6Ng01-277N11
Chromosome15 (Build37)
Map Location 24,571,078 - 24,572,236
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666989, LOC666999
Downstream geneLOC100040492, LOC100040499, LOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1, EG432939, LOC100040583, Myo10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277N11.bB6Ng01-277N11.g
ACCGA078249GA078250
length1,1441,153
definitionB6Ng01-277N11.b B6Ng01-277N11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaactactttaatgttaaataagatattctgaagtgaagtaaa
aatgaacaatgtgagcaatgcattcatttgcacacacttgcatatgtgga
cacaaacacacatccactcatatatacacaagtatatataatttaaagta
aaggtccttttaaagaaatagcattagaaatttaaaacattttgaattca
atgaaaaatttaaaatagcctattaaaagtgtggattgtggggtaaaata
atatatttaaaatcttatactaaagaaaagacagttctaagtagttgaca
tatctaacttggaaattccaaaatagaaaccaaagtttatccagtgtatt
aaggaaaatgggggaaagctacataacagtcagaaaacatgaagtaaaat
tagctgtaacatctattaaataaaagttactcctttgaaatgaaagttaa
atcaaatgtctacataatgatgaataaaaatgaagatataaactacctaa
gtttggaatgacagagaacgcatgacaacaggcaatatatcgaccatcaa
gtctaccatgaacacatttacaccagtaaattaagtgtgcatgccaattt
cacacagaagtcaagcattataatttgacactaatgggcatattctgcaa
tccactctctcaatattctacaagttgctgtcacattttgtccatatttt
atagattttaacaactaattaagacaatgttttctatgctaatatactta
ggtacaatttttcaatccttattttatctgtgtttatattttatttaaat
atttgaatgttttagtacagttatcaaggctgcacaactcataacatttt
accatcatcttatgtttatattttgggcccaaaccaaaatacacagacaa
atgaagtcagacaaagggaggggagaggcaaggcagcagaaaacaagaag
tggagagctctaaatattaaattgaggaatttattttccagtaaatgaat
gttaactcaattgtgactttccatttggaaaggtcagggaataacagttc
cttaccatacaggatcaaaattagccagcaatcatctcagggaacctttg
actcaattcatgcatcactgagttaattgatctagcagtaatca

gaattcaggccaatgctaggacagagggtcactctctgaaaaatgaccat
ggtgccccattgctaagaacaacatccacacagctcattaatcatagaga
ggttgagctggttcctgcatggagacttcccccttaccttctaggctcct
tggtaaaagaagaaggtcctttgcaggctacagaaagagaaatttggaca
ccaacccagccacaaaaccctcgacctgctacctgtcctgcctgcaagat
attctgggacaaaggtgtcatagaacttgtgggactggcctattaaacat
tgctttaatttgaggcccactccatgaaagggagcccagacctagcactg
caggcatgaccagggactgaagactggatagccaaacaccaaacaccaca
ggcaaagccaaaccaaaccaaaccaaaccaaaccaaacccaacaacaagt
gacaaactaacataaaacaaaacaagacaagacaaaacaaaacaaaacac
ctttttagagatactctgctataattatagatcagtccagctgtcactag
agaggcatcctctggcagcatattcgagtgtgtatagagatccatatcca
ggcaagagagagagagagagagagagagagagagagagagagagagagga
aattgatgaaattaaaggtctccatcagggctgtttctttggaaaacagg
aaaccctatggaagatgagaaagaaagcccatagaagtcagacaggatga
agaacaaacagaatgggaggacagacagaatggaggacaccaagggaatt
atgggcctgtgaaatcaactaagcaggactcatatgtgtttacagagact
gaaagcacaagaaagctgccctgagtggggtatgcacaaggtcttctgtg
cacatgtcatggctgttagcttggtgttctgttggactcttatagtggcg
ctgtgtatctctgcctctttgcctggtctgggactctttttcctctatta
gggtgctttgtccagcctcgatatgaggctttgcctgtctattgtaacct
tgattggtctagtagctactggatctgttcttctggaagaactaagctta
gtaatgtgggaagaagaggtacgtggtacgtaaggcgagtaacttcacag
cat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_24571078_24572236
seq2: B6Ng01-277N11.b_48_1191

seq1  GAATTCTCAACTACTTTAATGTTAAATAAGATATTCTGAAGTGAAGTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAACTACTTTAATGTTAAATAAGATATTCTGAAGTGAAGTAAA  50

seq1  AATGAACAATGTGAGCAATGCATTCATTTGCACACACTTGCATATGTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACAATGTGAGCAATGCATTCATTTGCACACACTTGCATATGTGGA  100

seq1  CACAAACACACATCCACTCATATATACACAAGTATATATAATTTAAAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACACACATCCACTCATATATACACAAGTATATATAATTTAAAGTA  150

seq1  AAGGTCCTTTTAAAGAAATAGCATTAGAAATTTAAAACATTTTGAATTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCTTTTAAAGAAATAGCATTAGAAATTTAAAACATTTTGAATTCA  200

seq1  ATGAAAAATTTAAAATAGCCTATTAAAAGTGTGGATTGTGGGGTAAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAATTTAAAATAGCCTATTAAAAGTGTGGATTGTGGGGTAAAATA  250

seq1  ATATATTTAAAATCTTATACTAAAGAAAAGACAGTTCTAAGTAGTTGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTAAAATCTTATACTAAAGAAAAGACAGTTCTAAGTAGTTGACA  300

seq1  TATCTAACTTGGAAATTCCAAAATAGAAACCAAAGTTTATCCAGTGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAACTTGGAAATTCCAAAATAGAAACCAAAGTTTATCCAGTGTATT  350

seq1  AAGGAAAATGGGGGAAAGCTACATAACAGTCAGAAAACATGAAGTAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAATGGGGGAAAGCTACATAACAGTCAGAAAACATGAAGTAAAAT  400

seq1  TAGCTGTAACATCTATTAAATAAAAGTTACTCCTTTGAAATGAAAGTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTAACATCTATTAAATAAAAGTTACTCCTTTGAAATGAAAGTTAA  450

seq1  ATCAAATGTCTACATAATGATGAATAAAAATGAAGATATAAACTACCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATGTCTACATAATGATGAATAAAAATGAAGATATAAACTACCTAA  500

seq1  GTTTGGAATGACAGAGAACGCATGACAACAGGCAATATATCGACCATCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGAATGACAGAGAACGCATGACAACAGGCAATATATCGACCATCAA  550

seq1  GTCTACCATGAACACATTTACACCAGTAAATTAAGTGTGCATGCCAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACCATGAACACATTTACACCAGTAAATTAAGTGTGCATGCCAATTT  600

seq1  CACACAGAAGTCAAGCATTATAATTTGACACTAATGGGCATATTCTGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGAAGTCAAGCATTATAATTTGACACTAATGGGCATATTCTGCAA  650

seq1  TCCACTCTCTCAATATTCTACAAGTTGCTGTCACATTTTGTCCATATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTCTCTCAATATTCTACAAGTTGCTGTCACATTTTGTCCATATTTT  700

seq1  ATAGATTTTAACAACTAATTAAGACAATGTTTTCTATGCTAATATACTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTTTAACAACTAATTAAGACAATGTTTTCTATGCTAATATACTTA  750

seq1  GGTACAATTTTTCAATCCTTATTTTATCTGTGTTTATATTTTATTTAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAATTTTTCAATCCTTATTTTATCTGTGTTTATATTTTATTTAAAT  800

seq1  ATTTGAATGTTTTAGTACAGTTATCAAGGCTGCACAACTCATAACATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAATGTTTTAGTACAGTTATCAAGGCTGCACAACTCATAACATTTT  850

seq1  ACCATCATCTTATGTTTATATTTT-GGCCCAAACCAAAATACACAGACAA  899
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACCATCATCTTATGTTTATATTTTGGGCCCAAACCAAAATACACAGACAA  900

seq1  ATGAAGTCAGACAAA-GGAGGGGAGAGGCAAGGCAGCAGAAAACAAGAAG  948
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATGAAGTCAGACAAAGGGAGGGGAGAGGCAAGGCAGCAGAAAACAAGAAG  950

seq1  TGGGAGAGCTCTAAATATT-AATTGAGGAATTTATTTTCCAGTAAATTGA  997
      | ||||||||||||||||| |||||||||||||||||||||||||| |||
seq2  T-GGAGAGCTCTAAATATTAAATTGAGGAATTTATTTTCCAGTAAA-TGA  998

seq1  ATGTTAACTCAATTGTGACTTTCCATTTGGGAAAGGTCAAGG-ATAACAG  1046
      |||||||||||||||||||||||||||| |||||||||| || |||||||
seq2  ATGTTAACTCAATTGTGACTTTCCATTT-GGAAAGGTCAGGGAATAACAG  1047

seq1  TCCCTTAACCCATTACAGAATCCAAAATTAAGCAGCAAATTCATCTCAGG  1096
      | |||||  ||| ||||| || ||||||||  ||||||  ||||||||||
seq2  TTCCTTA--CCA-TACAGGAT-CAAAATTAGCCAGCAA--TCATCTCAGG  1091

seq1  GGAAACCCTTTGACTCATTTCAATGGCATCACTGAAGTTATTGATTTTTA  1146
      |   | ||||||||||| ||||   ||||||||||  | |||||| |   
seq2  G---AACCTTTGACTCAATTCA--TGCATCACTGAGTTAATTGATCT---  1133

seq1  AAGGCAGTAATCA  1159
         ||||||||||
seq2  --AGCAGTAATCA  1144


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