BAC Information

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BAC

Clone NameB6Ng01-277P10
Chromosome15 (Build37)
Map Location 90,460,240 - 90,461,317
singlet/doubletsinglet
Overlap geneCpne8
Upstream geneLOC676575, Syt10, Alg10b, EG627342
Downstream geneLOC100042462, LOC100042471, EG667682, Tcea1-ps1, Spn-ps, Kif21a, EG635871, Abcd2, LOC545126, Slc2a13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277P10.bB6Ng01-277P10.g
ACCGA078337GA078338
length1,075299
definitionB6Ng01-277P10.b B6Ng01-277P10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacagctggtctctccagagtgatcctgccactatcgagaatta
aaattattactgcaggcctgaaactttgtaagtcacgaggacatactcta
gtgccaagaaaaggctcatagagccagattaccctttgtagattctatcc
taattaatacatagtgaacaacagccaaccgcagatttggggcaaatttg
agcttagatctctctagtaatgaaacaattatcacccagacttgcaggaa
ggctggggacacaatttgaagagtctctgaaaaaaaaaatgagcagaaag
tgaaatggtggtatttctagaaaaacaggcacagataatgcccaacctca
atgcctggaataaatccttaattcttcaacatgcagaaaaacgctaagct
aaaacacacatttgatgtattttccatgttgacagaaagccaacacataa
tctgaaaaacctccatcagcatacatgatagcagaacagaaatatataaa
gtatgtcgtatacaattacaaattctccaaaatttgcagtacatcttccc
aggcccttccagctttaaaggtttccatagaataatccagtgttatgact
tcataagtggcttgccctttcccccttgcagctttcaatattgattttta
tatgtttttttgtgttttaacttatatgtcattgacaatttcttttctga
tcttgtctatttggcctatagacttcttttttttttttttcttttttctt
ttctctcccacccaacttgctccagcccaaagatatattttattatatgt
aagtacactgtagctgtcttcagacaccccagaaagacgcatcgggatct
cattacggatagttgtgagctaccgtgcggttgctgggattcgaactcag
gaccttggaagaatcagtcagtgtttctttacagctggagctatcgcagg
gctagcaaacacagagtggatgcctcacagtcagctatggatgatcacag
ggctccaatggaggagcctagagaaagtacccaggagctaaggattctgc
aacctataggtgaacaacattatga

actttgtagaccaggctggcctcgaactcagaaatctgcctgcctctgcc
tcccgagtgctggagagagacttatttttaatatgccataagcagctcag
aggcttggtgactccaaacttccatgttgctaatgcctccctcccctcct
atattcctgaattattatttaccaaaatctatatttcatttttgctaccc
ccgacccaattgtgggagtggcccctggggccactctttccgaattctcg
actcttccatggttgtatgctttctctcctgcccaactcaggctgatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_90460240_90461317
seq2: B6Ng01-277P10.b_48_1122

seq1  GAATTCTACAGCTGGTCTCTCCAGAGTGATCCTGCCACTATCGAGAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAGCTGGTCTCTCCAGAGTGATCCTGCCACTATCGAGAATTA  50

seq1  AAATTATTACTGCAGGCCTGAAACTTTGTAAGTCACGAGGACATACTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTACTGCAGGCCTGAAACTTTGTAAGTCACGAGGACATACTCTA  100

seq1  GTGCCAAGAAAAGGCTCATAGAGCCAGATTACCCTTTGTAGATTCTATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAAGAAAAGGCTCATAGAGCCAGATTACCCTTTGTAGATTCTATCC  150

seq1  TAATTAATACATAGTGAACAACAGCCAACCGCAGATTTGGGGCAAATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAATACATAGTGAACAACAGCCAACCGCAGATTTGGGGCAAATTTG  200

seq1  AGCTTAGATCTCTCTAGTAATGAAACAATTATCACCCAGACTTGCAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAGATCTCTCTAGTAATGAAACAATTATCACCCAGACTTGCAGGAA  250

seq1  GGCTGGGGACACAATTTGAAGAGTCTCTGAAAAAAAAAATGAGCAGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGGACACAATTTGAAGAGTCTCTGAAAAAAAAAATGAGCAGAAAG  300

seq1  TGAAATGGTGGTATTTCTAGAAAAACAGGCACAGATAATGCCCAACCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGGTGGTATTTCTAGAAAAACAGGCACAGATAATGCCCAACCTCA  350

seq1  ATGCCTGGAATAAATCCTTAATTCTTCAACATGCAGAAAAACGCTAAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTGGAATAAATCCTTAATTCTTCAACATGCAGAAAAACGCTAAGCT  400

seq1  AAAACACACATTTGATGTATTTTCCATGTTGACAGAAAGCCAACACATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACACATTTGATGTATTTTCCATGTTGACAGAAAGCCAACACATAA  450

seq1  TCTGAAAAACCTCCATCAGCATACATGATAGCAGAACAGAAATATATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAAACCTCCATCAGCATACATGATAGCAGAACAGAAATATATAAA  500

seq1  GTATGTCGTATACAATTACAAATTCTCCAAAATTTGCAGTACATCTTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTCGTATACAATTACAAATTCTCCAAAATTTGCAGTACATCTTCCC  550

seq1  AGGCCCTTCCAGCTTTAAAGGTTTCCATAGAATAATCCAGTGTTATGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCTTCCAGCTTTAAAGGTTTCCATAGAATAATCCAGTGTTATGACT  600

seq1  TCATAAGTGGCTTGCCCTTTCCCCCTTGCAGCTTTCAATATTGATTTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGTGGCTTGCCCTTTCCCCCTTGCAGCTTTCAATATTGATTTTTA  650

seq1  TATGTTTTTTTGTGTTTTAACTTATATGTCATTGACAATTTCTTTTCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTTTTTGTGTTTTAACTTATATGTCATTGACAATTTCTTTTCTGA  700

seq1  TCTTGTCTATTTGGCCTATAGACTTC-TTTTTTTTTTTTTCTTTTTTCTT  749
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCTTGTCTATTTGGCCTATAGACTTCTTTTTTTTTTTTTTCTTTTTTCTT  750

seq1  TTCTCTCCCACCCAACTTGCTCCAGCCCAAAGATATA-TTTATTATATGT  798
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTCTCTCCCACCCAACTTGCTCCAGCCCAAAGATATATTTTATTATATGT  800

seq1  AAGTACACTGTAGCTGTCTTCAGACACCCCAGAAGAAGGCATC-GGATCT  847
      ||||||||||||||||||||||||||||||||||  | ||||| ||||||
seq2  AAGTACACTGTAGCTGTCTTCAGACACCCCAGAAAGACGCATCGGGATCT  850

seq1  CATTACGGATAGTTGTGAGCTACCGTGCGGTTGCTGGGATTCGAACTCAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACGGATAGTTGTGAGCTACCGTGCGGTTGCTGGGATTCGAACTCAG  900

seq1  GACCTTTGGAAG-ATCAGTCAGTG-TTCTTAACAGCT-GAGCTATCGCAG  944
      |||| ||||||| ||||||||||| ||||| |||||| ||||||||||||
seq2  GACC-TTGGAAGAATCAGTCAGTGTTTCTTTACAGCTGGAGCTATCGCAG  949

seq1  GGGCCTAGCAAACACAGAAGTGGATG-CTCACAGTCAGCTAATGGATGGA  993
      ||  ||||||||||||| |||||||| ||||||||||||| |||||| ||
seq2  GG--CTAGCAAACACAG-AGTGGATGCCTCACAGTCAGCT-ATGGAT-GA  994

seq1  TCACAGGGCTCCCAATGGAGGAG-CTAGAGAAAGTACCCAAGGAGCTAAA  1042
      |||||||||| |||||||||||| ||||||||||||||| ||||||| ||
seq2  TCACAGGGCT-CCAATGGAGGAGCCTAGAGAAAGTACCC-AGGAGCT-AA  1041

seq1  GGGATCTGCAACCCTATAGGTGGAACAACATTATGA  1078
      ||  ||||||| ||||||||| ||||||||||||||
seq2  GGATTCTGCAA-CCTATAGGT-GAACAACATTATGA  1075


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