BAC Information

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BAC

Clone NameB6Ng01-281J02
Chromosome15 (Build37)
Map Location 61,712,964 - 61,829,110
singlet/doubletdoublet
Overlap geneMyc
Upstream geneA1bg, LOC100040323
Downstream genePvt1, LOC100040584, H2afy3, LOC100040430, Tsg101-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281J02.bB6Ng01-281J02.g
ACCGA081012GA081013
length1891,149
definitionB6Ng01-281J02.b B6Ng01-281J02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,828,922 - 61,829,110)(61,712,964 - 61,714,112)
sequence
tctccaaatctgtggtagaggggtatagcttttgctgatccttgtttgcc
cttggaattcccacctcactgcaaatcacctgggctgagttggctcaaaa
cagcccctaggcctcccacttcagactcaatttcaatacctctaagatgg
accattcgaatctctcttaacggggttgggggggtgggt
gaattctgtgtcaagagcctccacgagataaaaacagattggccattgcc
cgccagtgcatggccggccaggtcgctggggcagagagttgccttcacaa
gagcaggaacgtgctggttcctttcttaatattcgccaaaacactaggcc
atttaaaagtgggcacttgcacactagaggagctgagaacccaatatctg
cttagaccagaaaagggaacttgctagcagtcacaatctggagagccctg
gaggattcttggaaagtccatgcttgaacccaaaggagttgggttctgat
ggctccaaagacaggcagtaagacagatcagacacactcaacaaccaaaa
ccggagacaggcaggtgggctgcacagcttttccccagacccctttagac
ctgagcagatttgaaaggatgcagcccattgtagggaaagactttgcctt
ctcagttagttctccctggaaatggcctcatggaccctcctagctgggca
accaagactaaccttcacaaatacaaacacaaaagaataaactagtacca
tataatgcattgaaattgcatccttagtagaaccatgataaaaatgcaaa
gctcagacctgtgatctttttgtggagaacaactttagaactgaccctgt
tcctcatcgctgaagtgtttaactgcagacccactagttgctgaacagtg
ttaaccggtttcctttctccctctgcgctgaccaccttactccctaataa
acagtaggcaaacagcaaataaataattagttcttgtaaatggtggctag
ggctctcttcttttggatttgttgaaagattactttcttgcttttttgag
ggtgtagtttccctccttgtgatggagttttccatctactatcctttata
gggctagatttgtagacagatattgtgtaaacttggtattgtcatggaat
atcttggtttctccatctacagtaatagagagctttgctggtatagtaac
ttgggctggccatttttgttctctagagtctgtatgaaagagtggatgct
ccacagtcagctattggatgatcacagttcccccaatgcagtaggcctag
agaaagtaccatggacctaagggatctgccaatcctaatagggtagaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_61828922_61829110
seq2: B6Ng01-281J02.b_53_241 (reverse)

seq1  ACCCACCCCCCCAACCCCGTTAAGAGAGATTCGAATGGTCCATCTTAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCCCCCCAACCCCGTTAAGAGAGATTCGAATGGTCCATCTTAGAG  50

seq1  GTATTGAAATTGAGTCTGAAGTGGGAGGCCTAGGGGCTGTTTTGAGCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGAAATTGAGTCTGAAGTGGGAGGCCTAGGGGCTGTTTTGAGCCAA  100

seq1  CTCAGCCCAGGTGATTTGCAGTGAGGTGGGAATTCCAAGGGCAAACAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCCAGGTGATTTGCAGTGAGGTGGGAATTCCAAGGGCAAACAAGG  150

seq1  ATCAGCAAAAGCTATACCCCTCTACCACAGATTTGGAGA  189
      |||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCAAAAGCTATACCCCTCTACCACAGATTTGGAGA  189

seq1: chr15_61712964_61714112
seq2: B6Ng01-281J02.g_66_1214

seq1  GAATTCTGTGTCAAGAGCCTCCACGAGATAAAAACAGATTGGCCATTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTCAAGAGCCTCCACGAGATAAAAACAGATTGGCCATTGCC  50

seq1  CGCCAGTGCATGGCCGGCCAGGTCGCTGGGGCAGAGAGTTGCCTTCACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAGTGCATGGCCGGCCAGGTCGCTGGGGCAGAGAGTTGCCTTCACAA  100

seq1  GAGCAGGAACGTGCTGGTTCCTTTCTTAATATTCGCCAAAACACTAGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGGAACGTGCTGGTTCCTTTCTTAATATTCGCCAAAACACTAGGCC  150

seq1  ATTTAAAAGTGGGCACTTGCACACTAGAGGAGCTGAGAACCCAATATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAAGTGGGCACTTGCACACTAGAGGAGCTGAGAACCCAATATCTG  200

seq1  CTTAGACCAGAAAAGGGAACTTGCTAGCAGTCACAATCTGGAGAGCCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGACCAGAAAAGGGAACTTGCTAGCAGTCACAATCTGGAGAGCCCTG  250

seq1  GAGGATTCTTGGAAAGTCCATGCTTGAACCCAAAGGAGTTGGGTTCTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTCTTGGAAAGTCCATGCTTGAACCCAAAGGAGTTGGGTTCTGAT  300

seq1  GGCTCCAAAGACAGGCAGTAAGACAGATCAGACACACTCAACAACCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCAAAGACAGGCAGTAAGACAGATCAGACACACTCAACAACCAAAA  350

seq1  CCGGAGACAGGCAGGTGGGCTGCACAGCTTTTCCCCAGACCCCTTTAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAGACAGGCAGGTGGGCTGCACAGCTTTTCCCCAGACCCCTTTAGAC  400

seq1  CTGAGCAGATTTGAAAGGATGCAGCCCATTGTAGGGAAAGACTTTGCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAGATTTGAAAGGATGCAGCCCATTGTAGGGAAAGACTTTGCCTT  450

seq1  CTCAGTTAGTTCTCCCTGGAAATGGCCTCATGGACCCTCCTAGCTGGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTAGTTCTCCCTGGAAATGGCCTCATGGACCCTCCTAGCTGGGCA  500

seq1  ACCAAGACTAACCTTCACAAATACAAACACAAAAGAATAAACTAGTACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGACTAACCTTCACAAATACAAACACAAAAGAATAAACTAGTACCA  550

seq1  TATAATGCATTGAAATTGCATCCTTAGTAGAACCATGATAAAAATGCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGCATTGAAATTGCATCCTTAGTAGAACCATGATAAAAATGCAAA  600

seq1  GCTCAGACCTGTGATCTTTTTGTGGAGAACAACTTTAGAACTGACCCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGACCTGTGATCTTTTTGTGGAGAACAACTTTAGAACTGACCCTGT  650

seq1  TCCTCATCGCTGAAGTGTTTAACTGCAGACCCACTAGTTGCTGAACAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATCGCTGAAGTGTTTAACTGCAGACCCACTAGTTGCTGAACAGTG  700

seq1  TTAACCGGTTTCCTTTCTCCCTCTGCGCTGACCACCTTACTCCCTAATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCGGTTTCCTTTCTCCCTCTGCGCTGACCACCTTACTCCCTAATAA  750

seq1  ACAGTAGGCAAACAGCAAATAAATAATTAGTTCTTGTAAATGGTGGCTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGGCAAACAGCAAATAAATAATTAGTTCTTGTAAATGGTGGCTAG  800

seq1  GGCTCTCTTCTTTTGGATTTGTTGAAAGATTACTTTCTTGCTTTTTTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCTTCTTTTGGATTTGTTGAAAGATTACTTTCTTGCTTTTTTGAG  850

seq1  GGTGTAGTTTCCCTCCTTGTGATGGAGTTTTCCATCTACTATCCTTTATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAGTTTCCCTCCTTGTGATGGAGTTTTCCATCTACTATCCTTTATA  900

seq1  GGGCTAGATTTGTAGACAGATATTGTGTAAACTTGGTATTGTCATGGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAGATTTGTAGACAGATATTGTGTAAACTTGGTATTGTCATGGAAT  950

seq1  ATCTTGGTTTCTCCATCTACAGTAATAGAGAGCTTTGCTGGGTATAGTAA  1000
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATCTTGGTTTCTCCATCTACAGTAATAGAGAGCTTTGCT-GGTATAGTAA  999

seq1  CTTGGGCTGG-CATTTTTGTTCTCTTAAGAGTCTGTATGACAGAAGTGGA  1049
      |||||||||| ||||||||||||||  ||||||||||||| || ||||||
seq2  CTTGGGCTGGCCATTTTTGTTCTCT--AGAGTCTGTATGAAAG-AGTGGA  1046

seq1  TGCT-CACAGTCAGCTATTGGATGAATCACAGGGCCCCCAATGGAGAAG-  1097
      |||| ||||||||||||||||||| |||||||  ||||||||| || || 
seq2  TGCTCCACAGTCAGCTATTGGATG-ATCACAGTTCCCCCAATGCAGTAGG  1095

seq1  -CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTG-CAATCCT-ATA-GG  1143
       |||||||||||| ||| ||| || |||||||||| ||||||| ||| ||
seq2  CCTAGAGAAAGTA-CCATGGACCT-AAGGGATCTGCCAATCCTAATAGGG  1143

seq1  TAGAAC  1149
      ||||||
seq2  TAGAAC  1149