BAC Information

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BAC

Clone NameB6Ng01-283B04
Chromosome15 (Build37)
Map Location 64,164,277 - 64,314,336
singlet/doubletdoublet
Overlap geneDdef1
Upstream geneEG239502, EG432959, LOC672194, Mlze, AI987692, Gsdmdc2, 9930109F21Rik, LOC665769, 9030605I04Rik, 4933426G20Rik, 0910001A06Rik
Downstream geneAdcy8, LOC268812, LOC100040790, LOC665836
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283B04.bB6Ng01-283B04.g
ACCGA082124GA082125
length9831,038
definitionB6Ng01-283B04.b B6Ng01-283B04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,164,277 - 64,165,254)(64,313,293 - 64,314,336)
sequence
gaattcagcagagaccaactctgacaccaacactatgacaaagcctcatt
ggtattccatcgcatggtgtggtgtgatcaccaatagaggcttgttttga
gaatgggaaagaggtgacagagaagggaaggaggctggaggggacaggaa
gtggcgactttagccagagagcccttcacagaggagccaggtcttggaga
atatgagtgtgtgctggacaggagacggaagcgcatgcgcaaaggcagag
gcagagaagagcatggctaacccgtgtcaacagcctccctatctactact
cccacccccacagaagggcttgcaaggcttcttattcatttctttctaca
gaacgtgcattgtacatcaatttggtccataatccacttctttctccacc
tggtaaggcagattgctcacttctcaaagctctcctcgcatggactctgc
aagctgagaacagacgctcatagccagttgagcctgagattcatctctat
cccataccttctatgggaaaaagattcttggcagcacactgaaagttagg
aggcttggaacgccaatctatcaggagccaacatggggaactagcctggc
tgagaatggagccagcagaacagagggcagagcacaaagaacctactatg
tgccagccagtgctaagtacttccaggaagtggctggatttgcagccaca
tgtgggagttattacaaacctcggggtgaattaatcggagctcataggac
agtagcttgttcaaggtcacaggagccacagaggggctaggagatcttct
ggtaggcatgtaggtaccgctaccaaaggcgggaccagtgtcaggtgact
tcagtggtaatccactgcatccaggaggtggatgagccacatcctcctga
gaagaacatcacagatggtgtatagaacatgcctatagattgctatagga
ttaacaccatcacccatcctccatggaggtgac

gaattctcccacgtacaaactttacttgggaatatgctaagaaataagtt
ccagtctctaagagctgatggaactacattctttcatcttcatagaaata
tatggttcttagaaaatagtgcattcacttacattgtgcttatttcatgc
agctatgtctaagttgcagtcataaggtatagatcccttttatatttctt
tcatctgaaaatactattttcttgattagaaatatcagaaaaagctaatg
ctaaaaaaattaacaaattgtactggaaacagccaggggaaatgacaaat
tctttacatgacttttatctcttcttaaacttctaaacactgtattcaag
ggccacaaggaaatctgattaatcctggcagtctagattttcaaaatttg
tacatgaagtatatttgaccacacaatgtaaaaggggaaggatagaaaga
ccattgaaatgcacatggaaagagtctaatgttgattctaggtagagtat
gagatgttacatgtatatatcacaagtctagagtaactactaaaggtaga
aaacagagggaatattatttggtcttctcagggtacttaaacaaaatacc
gcagactggaagcagtttgcacagttctggagaatagatatacaaggtga
gggagaaaataggttttgtaagggttttcatattgtgctgtggtcactac
cttctcccagtcttcacatggctgcctcttggtgtgtaagcagagtggat
aacctcaccatctctctctacctccctctctccctctctacttcatgcct
tttctttcaagggccctatttgcatcatgcaagttcacctgtgacctcac
ataaatcaagcatgtctcaaatgtgtcatcgtcaaatatcaagcaaaagg
gtaacattccagcaaatgggattaagtgacataattaagtccagaaaatt
gtaaaacgaacaaacaaaatgtatgcaggctaggtagctcagtatgagaa
tacgaggccctgagcccagccccacactgagaagaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_64164277_64165254
seq2: B6Ng01-283B04.b_45_1027

seq1  GAATTCAGCAGAGACCAACTCTGACACCAACACTATGACAAAGCCTCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGAGACCAACTCTGACACCAACACTATGACAAAGCCTCATT  50

seq1  GGTATTCCATCGCATGGTGTGGTGTGATCACCAATAGAGGCTTGTTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTCCATCGCATGGTGTGGTGTGATCACCAATAGAGGCTTGTTTTGA  100

seq1  GAATGGGAAAGAGGTGACAGAGAAGGGAAGGAGGCTGGAGGGGACAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGAAAGAGGTGACAGAGAAGGGAAGGAGGCTGGAGGGGACAGGAA  150

seq1  GTGGCGACTTTAGCCAGAGAGCCCTTCACAGAGGAGCCAGGTCTTGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCGACTTTAGCCAGAGAGCCCTTCACAGAGGAGCCAGGTCTTGGAGA  200

seq1  ATATGAGTGTGTGCTGGACAGGAGACGGAAGCGCATGCGCAAAGGCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGTGTGTGCTGGACAGGAGACGGAAGCGCATGCGCAAAGGCAGAG  250

seq1  GCAGAGAAGAGCATGGCTAACCCGTGTCAACAGCCTCCCTATCTACTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGAAGAGCATGGCTAACCCGTGTCAACAGCCTCCCTATCTACTACT  300

seq1  CCCACCCCCACAGAAGGGCTTGCAAGGCTTCTTATTCATTTCTTTCTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCCACAGAAGGGCTTGCAAGGCTTCTTATTCATTTCTTTCTACA  350

seq1  GAACGTGCATTGTACATCAATTTGGTCCATAATCCACTTCTTTCTCCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGTGCATTGTACATCAATTTGGTCCATAATCCACTTCTTTCTCCACC  400

seq1  TGGTAAGGCAGATTGCTCACTTCTCAAAGCTCTCCTCGCATGGACTCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAGGCAGATTGCTCACTTCTCAAAGCTCTCCTCGCATGGACTCTGC  450

seq1  AAGCTGAGAACAGACGCTCATAGCCAGTTGAGCCTGAGATTCATCTCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAGAACAGACGCTCATAGCCAGTTGAGCCTGAGATTCATCTCTAT  500

seq1  CCCATACCTTCTATGGGAAAAAGATTCTTGGCAGCACACTGAAAGTTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACCTTCTATGGGAAAAAGATTCTTGGCAGCACACTGAAAGTTAGG  550

seq1  AGGCTTGGAACGCCAATCTATCAGGAGCCAACATGGGGAACTAGCCTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGGAACGCCAATCTATCAGGAGCCAACATGGGGAACTAGCCTGGC  600

seq1  TGAGAATGGAGCCAGCAGAACAGAGGGCAGAGCACAAAGAACCTACTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATGGAGCCAGCAGAACAGAGGGCAGAGCACAAAGAACCTACTATG  650

seq1  TGCCAGCCAGTGCTAAGTACTTCCAGGAAGTGGCTGGATTTGCAGCCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGCCAGTGCTAAGTACTTCCAGGAAGTGGCTGGATTTGCAGCCACA  700

seq1  TGTGGGAGTTATTACAAACCTC-GGGTGAATTAATCGGAGCTCATAGGAC  749
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGTGGGAGTTATTACAAACCTCGGGGTGAATTAATCGGAGCTCATAGGAC  750

seq1  AGTAGCTTGTTCAAGGTCACA-GAG-CACAGAGGGGCTAGAGAATCTTCT  797
      ||||||||||||||||||||| ||| ||||||||||||||   |||||| 
seq2  AGTAGCTTGTTCAAGGTCACAGGAGCCACAGAGGGGCTAGGAGATCTTC-  799

seq1  TGGTAGGCATGTAGGTACCGCTACCAAAGGCGGGACCAGTGTCCAGTGAC  847
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  TGGTAGGCATGTAGGTACCGCTACCAAAGGCGGGACCAGTGTCAGGTGAC  849

seq1  TTCAGTGGTAAT-CACTGCATCCAGGAGGT-GATGAAGCCACCATCCTCC  895
      |||||||||||| ||||||||||||||||| |||| ||||| ||||||||
seq2  TTCAGTGGTAATCCACTGCATCCAGGAGGTGGATG-AGCCA-CATCCTCC  897

seq1  TGAGA--GACATCCAACAGAT-GTGTATAGAACATG-CTATAGATGGCTA  941
      |||||   |||||  |||||| |||||||||||||| |||||||| ||||
seq2  TGAGAAGAACATC--ACAGATGGTGTATAGAACATGCCTATAGATTGCTA  945

seq1  TA-GAATAACACCATCACCCATCTCCCAGTGAGGTGAC  978
      || || |||||||||||||||||  |||  ||||||||
seq2  TAGGATTAACACCATCACCCATCCTCCATGGAGGTGAC  983


seq1: chr15_64313293_64314336
seq2: B6Ng01-283B04.g_66_1103 (reverse)

seq1  CCCTCTCTCCAGTGTTGGGGCTGGGGCTCAGGGCCTCGTATTCTCATACT  50
      ||||||   ||||| ||||||| |||||||||||||||||||||||||||
seq2  CCCTCTTCTCAGTG-TGGGGCT-GGGCTCAGGGCCTCGTATTCTCATACT  48

seq1  GAGCTACCTAGCCCTGCATTACATTTTGTTTGTTCGTTTTTACAATTTTC  100
      ||||||||||| |||||| ||||||||||||||||| |||||||||||||
seq2  GAGCTACCTAG-CCTGCA-TACATTTTGTTTGTTCG-TTTTACAATTTTC  95

seq1  TGGACTTAATTATGTCACTTAAATCCATTTGCTGGAATGTTACCCTTTTG  150
      ||||||||||||||||||||||  ||||||||||||||||||||||||||
seq2  TGGACTTAATTATGTCACTTAATCCCATTTGCTGGAATGTTACCCTTTTG  145

seq1  CCTGATATTTGACGATGACACATTTGAGACATGCTTTGATTTATGTGAGG  200
      | |||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTGATATTTGACGATGACACATTTGAGACATGC-TTGATTTATGTGAGG  194

seq1  TCACAGGTGAACTTGCATGATGCAAATAGGGCCCTTGAAAGAAAAGGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGTGAACTTGCATGATGCAAATAGGGCCCTTGAAAGAAAAGGCAT  244

seq1  GAAGTAGAGAGGGAGAGAGGGAGGTAGAGAGAGATGGTGAGGTTATCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGAGAGGGAGAGAGGGAGGTAGAGAGAGATGGTGAGGTTATCCAC  294

seq1  TCTGCTTACACACCAAGAGGCAGCCATGTGAAGACTGGGAGAAGGTAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTACACACCAAGAGGCAGCCATGTGAAGACTGGGAGAAGGTAGTG  344

seq1  ACCACAGCACAATATGAAAACCCTTACAAAACCTATTTTCTCCCTCACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGCACAATATGAAAACCCTTACAAAACCTATTTTCTCCCTCACCT  394

seq1  TGTATATCTATTCTCCAGAACTGTGCAAACTGCTTCCAGTCTGCGGTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATCTATTCTCCAGAACTGTGCAAACTGCTTCCAGTCTGCGGTATT  444

seq1  TTGTTTAAGTACCCTGAGAAGACCAAATAATATTCCCTCTGTTTTCTACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTAAGTACCCTGAGAAGACCAAATAATATTCCCTCTGTTTTCTACC  494

seq1  TTTAGTAGTTACTCTAGACTTGTGATATATACATGTAACATCTCATACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTAGTTACTCTAGACTTGTGATATATACATGTAACATCTCATACTC  544

seq1  TACCTAGAATCAACATTAGACTCTTTCCATGTGCATTTCAATGGTCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAGAATCAACATTAGACTCTTTCCATGTGCATTTCAATGGTCTTTC  594

seq1  TATCCTTCCCCTTTTACATTGTGTGGTCAAATATACTTCATGTACAAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTTCCCCTTTTACATTGTGTGGTCAAATATACTTCATGTACAAATT  644

seq1  TTGAAAATCTAGACTGCCAGGATTAATCAGATTTCCTTGTGGCCCTTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATCTAGACTGCCAGGATTAATCAGATTTCCTTGTGGCCCTTGAA  694

seq1  TACAGTGTTTAGAAGTTTAAGAAGAGATAAAAGTCATGTAAAGAATTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGTTTAGAAGTTTAAGAAGAGATAAAAGTCATGTAAAGAATTTGT  744

seq1  CATTTCCCCTGGCTGTTTCCAGTACAATTTGTTAATTTTTTTAGCATTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCCCTGGCTGTTTCCAGTACAATTTGTTAATTTTTTTAGCATTAG  794

seq1  CTTTTTCTGATATTTCTAATCAAGAAAATAGTATTTTCAGATGAAAGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTGATATTTCTAATCAAGAAAATAGTATTTTCAGATGAAAGAAA  844

seq1  TATAAAAGGGATCTATACCTTATGACTGCAACTTAGACATAGCTGCATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGGGATCTATACCTTATGACTGCAACTTAGACATAGCTGCATGA  894

seq1  AATAAGCACAATGTAAGTGAATGCACTATTTTCTAAGAACCATATATTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCACAATGTAAGTGAATGCACTATTTTCTAAGAACCATATATTTC  944

seq1  TATGAAGATGAAAGAATGTAGTTCCATCAGCTCTTAGAGACTGGAACTTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGATGAAAGAATGTAGTTCCATCAGCTCTTAGAGACTGGAACTTA  994

seq1  TTTCTTAGCATATTCCCAAGTAAAGTTTGTACGTGGGAGAATTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAGCATATTCCCAAGTAAAGTTTGTACGTGGGAGAATTC  1038


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